Protein–RNA interactions for Protein: P28358

HOXD10, Homeobox protein Hox-D10, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD10P28358 ADAM3A-202ENST00000460383 2528 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
HOXD10P28358 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC8.08□□□□□ -1.12
HOXD10P28358 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC8.08□□□□□ -1.12
HOXD10P28358 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
HOXD10P28358 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC8.08□□□□□ -1.12
HOXD10P28358 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
HOXD10P28358 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC8.08□□□□□ -1.12
HOXD10P28358 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC8.08□□□□□ -1.12
HOXD10P28358 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
HOXD10P28358 AL035563.1-201ENST00000609087 1539 ntBASIC8.08□□□□□ -1.12
HOXD10P28358 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
HOXD10P28358 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
HOXD10P28358 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
HOXD10P28358 EGF-204ENST00000503392 3642 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
HOXD10P28358 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
HOXD10P28358 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
HOXD10P28358 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC8.07□□□□□ -1.12
HOXD10P28358 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
HOXD10P28358 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
HOXD10P28358 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
HOXD10P28358 AC005520.1-201ENST00000556551 3695 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
HOXD10P28358 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
HOXD10P28358 GDNF-AS1-203ENST00000514532 2913 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
HOXD10P28358 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
HOXD10P28358 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC8.07□□□□□ -1.12
HOXD10P28358 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
HOXD10P28358 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC8.07□□□□□ -1.12
HOXD10P28358 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC8.07□□□□□ -1.12
HOXD10P28358 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC8.07□□□□□ -1.12
HOXD10P28358 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC8.07□□□□□ -1.12
HOXD10P28358 RN7SKP237-201ENST00000364663 301 ntBASIC8.07□□□□□ -1.12
HOXD10P28358 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
HOXD10P28358 AC005522.1-201ENST00000395416 346 ntBASIC8.07□□□□□ -1.12
HOXD10P28358 AL391419.1-201ENST00000398901 1275 ntBASIC8.07□□□□□ -1.12
HOXD10P28358 AL773545.3-201ENST00000414297 706 ntBASIC8.07□□□□□ -1.12
HOXD10P28358 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC8.07□□□□□ -1.12
HOXD10P28358 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
HOXD10P28358 AL354893.1-201ENST00000433735 348 ntBASIC8.07□□□□□ -1.12
HOXD10P28358 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC8.07□□□□□ -1.12
HOXD10P28358 AL121578.2-201ENST00000448797 447 ntBASIC8.07□□□□□ -1.12
HOXD10P28358 OR2AF1P-201ENST00000454899 889 ntBASIC8.07□□□□□ -1.12
HOXD10P28358 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC8.07□□□□□ -1.12
HOXD10P28358 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC8.07□□□□□ -1.12
HOXD10P28358 RN7SKP196-201ENST00000516267 345 ntBASIC8.07□□□□□ -1.12
HOXD10P28358 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC8.07□□□□□ -1.12
HOXD10P28358 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
HOXD10P28358 AC012175.1-201ENST00000603755 531 ntBASIC8.07□□□□□ -1.12
HOXD10P28358 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC8.07□□□□□ -1.12
HOXD10P28358 AC089999.3-201ENST00000622440 577 ntBASIC8.07□□□□□ -1.12
HOXD10P28358 AC073857.1-201ENST00000625082 1054 ntBASIC8.07□□□□□ -1.12
HOXD10P28358 5S_rRNA.29-201ENST00000641250 107 ntBASIC8.07□□□□□ -1.12
HOXD10P28358 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
HOXD10P28358 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC8.07□□□□□ -1.12
HOXD10P28358 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
HOXD10P28358 UGT2B28-201ENST00000335568 1833 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
HOXD10P28358 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
HOXD10P28358 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC8.07□□□□□ -1.12
HOXD10P28358 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
HOXD10P28358 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
HOXD10P28358 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
HOXD10P28358 LAX1-203ENST00000442561 3023 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
HOXD10P28358 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
HOXD10P28358 CNPY1-204ENST00000636446 1637 ntAPPRIS P5 TSL 5 BASIC8.07□□□□□ -1.12
HOXD10P28358 CD46-205ENST00000358170 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
HOXD10P28358 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
HOXD10P28358 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HOXD10P28358 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
HOXD10P28358 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HOXD10P28358 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HOXD10P28358 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
HOXD10P28358 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
HOXD10P28358 NOLC1-209ENST00000605788 3932 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
HOXD10P28358 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
HOXD10P28358 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
HOXD10P28358 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
HOXD10P28358 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC8.06□□□□□ -1.12
HOXD10P28358 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
HOXD10P28358 OR6N2-201ENST00000339258 954 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
HOXD10P28358 PPIAP22-201ENST00000358455 498 ntBASIC8.06□□□□□ -1.12
HOXD10P28358 RGS5-202ENST00000367903 934 ntTSL 3 BASIC8.06□□□□□ -1.12
HOXD10P28358 FDPSP5-201ENST00000399474 1057 ntBASIC8.06□□□□□ -1.12
HOXD10P28358 SNORA11B-201ENST00000408175 129 ntBASIC8.06□□□□□ -1.12
HOXD10P28358 RN7SKP188-201ENST00000410789 317 ntBASIC8.06□□□□□ -1.12
HOXD10P28358 UQCRHP1-204ENST00000424609 274 ntBASIC8.06□□□□□ -1.12
HOXD10P28358 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC8.06□□□□□ -1.12
HOXD10P28358 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC8.06□□□□□ -1.12
HOXD10P28358 AL645568.1-202ENST00000437190 1016 ntTSL 5 BASIC8.06□□□□□ -1.12
HOXD10P28358 AC097359.1-201ENST00000447946 463 ntBASIC8.06□□□□□ -1.12
HOXD10P28358 SNORA81.1-201ENST00000458922 177 ntBASIC8.06□□□□□ -1.12
HOXD10P28358 UGT2A3P7-201ENST00000510485 734 ntBASIC8.06□□□□□ -1.12
HOXD10P28358 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC8.06□□□□□ -1.12
HOXD10P28358 OR7E154P-201ENST00000525174 932 ntBASIC8.06□□□□□ -1.12
HOXD10P28358 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC8.06□□□□□ -1.12
HOXD10P28358 RBM4-213ENST00000578778 582 ntTSL 4 BASIC8.06□□□□□ -1.12
HOXD10P28358 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC8.06□□□□□ -1.12
HOXD10P28358 GLUD1P2-201ENST00000583339 201 ntBASIC8.06□□□□□ -1.12
HOXD10P28358 GLUD1P8-201ENST00000585063 203 ntBASIC8.06□□□□□ -1.12
HOXD10P28358 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
HOXD10P28358 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC8.06□□□□□ -1.12
HOXD10P28358 AC012368.3-201ENST00000604190 219 ntBASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms