Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
HMGA1P17096 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC7.2□□□□□ -1.26
HMGA1P17096 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC7.2□□□□□ -1.26
HMGA1P17096 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC7.2□□□□□ -1.26
HMGA1P17096 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
HMGA1P17096 HCG18-244ENST00000602516 2890 ntBASIC7.2□□□□□ -1.26
HMGA1P17096 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC7.2□□□□□ -1.26
HMGA1P17096 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC7.2□□□□□ -1.26
HMGA1P17096 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
HMGA1P17096 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC7.19□□□□□ -1.26
HMGA1P17096 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
HMGA1P17096 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
HMGA1P17096 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
HMGA1P17096 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
HMGA1P17096 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC7.19□□□□□ -1.26
HMGA1P17096 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
HMGA1P17096 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC7.19□□□□□ -1.26
HMGA1P17096 ANGPT2-203ENST00000523120 2997 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
HMGA1P17096 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
HMGA1P17096 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC7.19□□□□□ -1.26
HMGA1P17096 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC7.19□□□□□ -1.26
HMGA1P17096 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
HMGA1P17096 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
HMGA1P17096 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HMGA1P17096 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC7.19□□□□□ -1.26
HMGA1P17096 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HMGA1P17096 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HMGA1P17096 SNORA7A-201ENST00000384765 139 ntBASIC7.19□□□□□ -1.26
HMGA1P17096 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
HMGA1P17096 AL033519.1-201ENST00000407266 307 ntBASIC7.19□□□□□ -1.26
HMGA1P17096 RNA5SP155-201ENST00000411154 129 ntBASIC7.19□□□□□ -1.26
HMGA1P17096 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC7.19□□□□□ -1.26
HMGA1P17096 AC073987.1-201ENST00000422683 638 ntTSL 3 BASIC7.19□□□□□ -1.26
HMGA1P17096 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC7.19□□□□□ -1.26
HMGA1P17096 RPS10P21-201ENST00000430654 475 ntBASIC7.19□□□□□ -1.26
HMGA1P17096 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC7.19□□□□□ -1.26
HMGA1P17096 HBG2-204ENST00000444587 307 ntTSL 2 BASIC7.19□□□□□ -1.26
HMGA1P17096 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC7.19□□□□□ -1.26
HMGA1P17096 RPL23AP28-201ENST00000448062 470 ntBASIC7.19□□□□□ -1.26
HMGA1P17096 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC7.19□□□□□ -1.26
HMGA1P17096 AL445991.1-201ENST00000450381 475 ntBASIC7.19□□□□□ -1.26
HMGA1P17096 MEF2AP1-201ENST00000454867 863 ntBASIC7.19□□□□□ -1.26
HMGA1P17096 RN7SL393P-201ENST00000463588 296 ntBASIC7.19□□□□□ -1.26
HMGA1P17096 AC135721.2-201ENST00000464237 300 ntBASIC7.19□□□□□ -1.26
HMGA1P17096 RN7SL37P-201ENST00000490461 307 ntBASIC7.19□□□□□ -1.26
HMGA1P17096 RN7SKP196-201ENST00000516267 345 ntBASIC7.19□□□□□ -1.26
HMGA1P17096 OR4A21P-201ENST00000532759 944 ntBASIC7.19□□□□□ -1.26
HMGA1P17096 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
HMGA1P17096 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC7.19□□□□□ -1.26
HMGA1P17096 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HMGA1P17096 ULK4P1-202ENST00000565174 503 ntBASIC7.19□□□□□ -1.26
HMGA1P17096 AC015911.3-201ENST00000592908 849 ntTSL 5 BASIC7.19□□□□□ -1.26
HMGA1P17096 AL590032.1-201ENST00000604920 252 ntBASIC7.19□□□□□ -1.26
HMGA1P17096 AC004908.1-201ENST00000606572 541 ntBASIC7.19□□□□□ -1.26
HMGA1P17096 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC7.19□□□□□ -1.26
HMGA1P17096 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC7.19□□□□□ -1.26
HMGA1P17096 AC006328.2-201ENST00000623198 397 ntBASIC7.19□□□□□ -1.26
HMGA1P17096 AC012005.2-201ENST00000624333 397 ntBASIC7.19□□□□□ -1.26
HMGA1P17096 AC027348.2-201ENST00000624375 642 ntBASIC7.19□□□□□ -1.26
HMGA1P17096 SNORA16A-202ENST00000628458 135 ntBASIC7.19□□□□□ -1.26
HMGA1P17096 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HMGA1P17096 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC7.19□□□□□ -1.26
HMGA1P17096 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
HMGA1P17096 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
HMGA1P17096 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HMGA1P17096 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
HMGA1P17096 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
HMGA1P17096 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC7.19□□□□□ -1.26
HMGA1P17096 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
HMGA1P17096 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.18□□□□□ -1.26
HMGA1P17096 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HMGA1P17096 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC7.18□□□□□ -1.26
HMGA1P17096 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HMGA1P17096 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HMGA1P17096 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HMGA1P17096 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
HMGA1P17096 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HMGA1P17096 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
HMGA1P17096 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC7.18□□□□□ -1.26
HMGA1P17096 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC7.18□□□□□ -1.26
HMGA1P17096 OR4C1P-202ENST00000641065 1569 ntBASIC7.18□□□□□ -1.26
HMGA1P17096 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HMGA1P17096 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
HMGA1P17096 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
HMGA1P17096 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HMGA1P17096 AC019178.1-201ENST00000392337 440 ntBASIC7.18□□□□□ -1.26
HMGA1P17096 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HMGA1P17096 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC7.18□□□□□ -1.26
HMGA1P17096 FTH1P20-201ENST00000434913 548 ntBASIC7.18□□□□□ -1.26
HMGA1P17096 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC7.18□□□□□ -1.26
HMGA1P17096 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HMGA1P17096 AC004890.1-201ENST00000461005 181 ntBASIC7.18□□□□□ -1.26
HMGA1P17096 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC7.18□□□□□ -1.26
HMGA1P17096 AC044810.1-201ENST00000480271 711 ntBASIC7.18□□□□□ -1.26
HMGA1P17096 RPS10P20-201ENST00000494130 463 ntBASIC7.18□□□□□ -1.26
HMGA1P17096 AC021146.11-201ENST00000503319 491 ntBASIC7.18□□□□□ -1.26
HMGA1P17096 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC7.18□□□□□ -1.26
HMGA1P17096 AC138517.1-201ENST00000515724 568 ntBASIC7.18□□□□□ -1.26
HMGA1P17096 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC7.18□□□□□ -1.26
HMGA1P17096 EEF1B2P2-201ENST00000519625 676 ntBASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms