Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 NPM1P14-201ENST00000343743 866 ntBASIC6.5□□□□□ -1.37
SSX4O60224 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSX4O60224 RNA5SP218-201ENST00000363188 109 ntBASIC6.5□□□□□ -1.37
SSX4O60224 MGST3-202ENST00000367884 716 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
SSX4O60224 SSX9-201ENST00000376909 591 ntBASIC6.5□□□□□ -1.37
SSX4O60224 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SSX4O60224 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC6.5□□□□□ -1.37
SSX4O60224 NAP1L4P3-201ENST00000432820 1147 ntBASIC6.5□□□□□ -1.37
SSX4O60224 AL512882.1-201ENST00000436086 832 ntBASIC6.5□□□□□ -1.37
SSX4O60224 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC6.5□□□□□ -1.37
SSX4O60224 AL137074.1-201ENST00000442640 465 ntBASIC6.5□□□□□ -1.37
SSX4O60224 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC6.5□□□□□ -1.37
SSX4O60224 VN1R96P-201ENST00000446052 858 ntBASIC6.5□□□□□ -1.37
SSX4O60224 AL161454.1-201ENST00000446226 569 ntBASIC6.5□□□□□ -1.37
SSX4O60224 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.5□□□□□ -1.37
SSX4O60224 AC013429.1-201ENST00000456604 422 ntBASIC6.5□□□□□ -1.37
SSX4O60224 RPL12P40-201ENST00000467028 488 ntBASIC6.5□□□□□ -1.37
SSX4O60224 AC068522.1-201ENST00000482895 345 ntBASIC6.5□□□□□ -1.37
SSX4O60224 AC091917.2-201ENST00000505002 744 ntBASIC6.5□□□□□ -1.37
SSX4O60224 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SSX4O60224 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC6.5□□□□□ -1.37
SSX4O60224 AC100823.2-201ENST00000518337 699 ntBASIC6.5□□□□□ -1.37
SSX4O60224 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC6.5□□□□□ -1.37
SSX4O60224 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC6.5□□□□□ -1.37
SSX4O60224 FRG2IP-201ENST00000563581 781 ntBASIC6.5□□□□□ -1.37
SSX4O60224 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC6.5□□□□□ -1.37
SSX4O60224 AL365223.1-201ENST00000574864 1297 ntBASIC6.5□□□□□ -1.37
SSX4O60224 RN7SL178P-201ENST00000582930 304 ntBASIC6.5□□□□□ -1.37
SSX4O60224 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC6.5□□□□□ -1.37
SSX4O60224 AC140658.6-201ENST00000603958 201 ntBASIC6.5□□□□□ -1.37
SSX4O60224 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC6.5□□□□□ -1.37
SSX4O60224 AC069499.2-201ENST00000610665 382 ntBASIC6.5□□□□□ -1.37
SSX4O60224 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC6.5□□□□□ -1.37
SSX4O60224 AL357153.4-201ENST00000620487 1016 ntBASIC6.5□□□□□ -1.37
SSX4O60224 SATB1-AS1-242ENST00000627496 807 ntTSL 5 BASIC6.5□□□□□ -1.37
SSX4O60224 TEX41-271ENST00000628213 993 ntTSL 5 BASIC6.5□□□□□ -1.37
SSX4O60224 ZBTB20-AS5-203ENST00000628886 819 ntTSL 5 BASIC6.5□□□□□ -1.37
SSX4O60224 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SSX4O60224 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSX4O60224 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SSX4O60224 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC6.5□□□□□ -1.37
SSX4O60224 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.5□□□□□ -1.37
SSX4O60224 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.5□□□□□ -1.37
SSX4O60224 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.5□□□□□ -1.37
SSX4O60224 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSX4O60224 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC6.5□□□□□ -1.37
SSX4O60224 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC6.5□□□□□ -1.37
SSX4O60224 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC6.5□□□□□ -1.37
SSX4O60224 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC6.5□□□□□ -1.37
SSX4O60224 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSX4O60224 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSX4O60224 EEF1A1P4-201ENST00000359165 1405 ntBASIC6.5□□□□□ -1.37
SSX4O60224 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SSX4O60224 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
SSX4O60224 AC009831.5-201ENST00000624000 3189 ntBASIC6.49□□□□□ -1.37
SSX4O60224 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSX4O60224 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC6.49□□□□□ -1.37
SSX4O60224 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
SSX4O60224 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSX4O60224 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
SSX4O60224 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.49□□□□□ -1.37
SSX4O60224 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SSX4O60224 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
SSX4O60224 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
SSX4O60224 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
SSX4O60224 SNORA70I-201ENST00000384544 135 ntBASIC6.49□□□□□ -1.37
SSX4O60224 PTMAP8-201ENST00000397729 342 ntBASIC6.49□□□□□ -1.37
SSX4O60224 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC6.49□□□□□ -1.37
SSX4O60224 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSX4O60224 PPIAP30-201ENST00000415473 519 ntBASIC6.49□□□□□ -1.37
SSX4O60224 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC6.49□□□□□ -1.37
SSX4O60224 FECHP1-201ENST00000431896 1214 ntBASIC6.49□□□□□ -1.37
SSX4O60224 AC245047.1-201ENST00000433276 873 ntBASIC6.49□□□□□ -1.37
SSX4O60224 MTCO3P17-201ENST00000443775 513 ntBASIC6.49□□□□□ -1.37
SSX4O60224 MTND4LP12-201ENST00000448237 295 ntBASIC6.49□□□□□ -1.37
SSX4O60224 MRPS21P1-201ENST00000453850 223 ntBASIC6.49□□□□□ -1.37
SSX4O60224 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC6.49□□□□□ -1.37
SSX4O60224 AC112225.1-201ENST00000508230 297 ntBASIC6.49□□□□□ -1.37
SSX4O60224 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC6.49□□□□□ -1.37
SSX4O60224 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC6.49□□□□□ -1.37
SSX4O60224 OR7E87P-201ENST00000532397 929 ntBASIC6.49□□□□□ -1.37
SSX4O60224 AP005597.1-201ENST00000534192 802 ntBASIC6.49□□□□□ -1.37
SSX4O60224 AC027667.1-201ENST00000545814 304 ntBASIC6.49□□□□□ -1.37
SSX4O60224 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC6.49□□□□□ -1.37
SSX4O60224 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC6.49□□□□□ -1.37
SSX4O60224 AC012291.1-201ENST00000559666 429 ntTSL 5 BASIC6.49□□□□□ -1.37
SSX4O60224 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC6.49□□□□□ -1.37
SSX4O60224 TRIM69-210ENST00000561043 1017 ntTSL 3 BASIC6.49□□□□□ -1.37
SSX4O60224 AC007136.1-201ENST00000589141 199 ntBASIC6.49□□□□□ -1.37
SSX4O60224 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC6.49□□□□□ -1.37
SSX4O60224 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.49□□□□□ -1.37
SSX4O60224 AC024475.4-201ENST00000635144 1206 ntTSL 5 BASIC6.49□□□□□ -1.37
SSX4O60224 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC6.49□□□□□ -1.37
SSX4O60224 AC183089.2-201ENST00000637931 916 ntBASIC6.49□□□□□ -1.37
SSX4O60224 AC138627.1-204ENST00000641894 765 ntBASIC6.49□□□□□ -1.37
SSX4O60224 MAPK10-344ENST00000641718 3746 ntBASIC6.49□□□□□ -1.37
SSX4O60224 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSX4O60224 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSX4O60224 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SSX4O60224 AL161891.1-201ENST00000621575 4636 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms