Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC5.5□□□□□ -1.53
RBFOX3A6NFN3 AL731556.2-201ENST00000615610 770 ntBASIC5.5□□□□□ -1.53
RBFOX3A6NFN3 AC074029.3-201ENST00000618623 312 ntBASIC5.5□□□□□ -1.53
RBFOX3A6NFN3 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC5.5□□□□□ -1.53
RBFOX3A6NFN3 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC5.5□□□□□ -1.53
RBFOX3A6NFN3 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RBFOX3A6NFN3 AC016722.2-201ENST00000429761 1835 ntTSL 2 BASIC5.5□□□□□ -1.53
RBFOX3A6NFN3 GCSAML-204ENST00000463359 1822 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
RBFOX3A6NFN3 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RBFOX3A6NFN3 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.5□□□□□ -1.53
RBFOX3A6NFN3 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RBFOX3A6NFN3 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RBFOX3A6NFN3 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
RBFOX3A6NFN3 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RBFOX3A6NFN3 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RBFOX3A6NFN3 AC009135.2-201ENST00000624136 1768 ntBASIC5.5□□□□□ -1.53
RBFOX3A6NFN3 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 AC093297.3-201ENST00000607056 2517 ntBASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 EEF1A1P4-201ENST00000359165 1405 ntBASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 AC125232.1-201ENST00000452554 1408 ntBASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 AL157713.1-201ENST00000379752 1531 ntBASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 ZNF85-202ENST00000328178 2296 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 OR9K2-201ENST00000305377 1122 ntBASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 C2orf80-201ENST00000341287 1238 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 TMED5-201ENST00000370280 750 ntTSL 2 BASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 AL451046.1-201ENST00000406097 534 ntBASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 AL008626.1-201ENST00000412357 775 ntTSL 2 BASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 AC007422.2-201ENST00000419809 167 ntTSL 3 BASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 AC007568.1-201ENST00000422912 471 ntBASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 SNX18P3-201ENST00000424993 835 ntBASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 AL355355.1-201ENST00000442900 793 ntBASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 CASK-AS1-201ENST00000451126 515 ntTSL 2 BASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 DNAJC9-AS1-203ENST00000457758 548 ntTSL 3 BASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 RN7SL368P-201ENST00000473384 277 ntBASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 RN7SL797P-201ENST00000486314 297 ntBASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 AC095059.2-201ENST00000510601 933 ntBASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 AC105999.2-203ENST00000521030 663 ntTSL 3 BASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 AC090568.2-203ENST00000521433 579 ntTSL 4 BASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 ZNF345-205ENST00000526123 458 ntTSL 3 BASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 PGAM1P8-201ENST00000526979 453 ntBASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 LINC01490-201ENST00000548705 638 ntTSL 3 BASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 SAXO2-204ENST00000565432 811 ntAPPRIS ALT2 TSL 4 BASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 AC027688.2-201ENST00000569009 511 ntTSL 3 BASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 AC011840.3-201ENST00000579378 280 ntTSL 3 BASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 OR7A8P-201ENST00000595427 913 ntBASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 MIR6745-201ENST00000612694 127 ntBASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 AL137246.2-201ENST00000613439 662 ntBASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 LINC00595-211ENST00000634735 535 ntTSL 3 BASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 OR9K2-204ENST00000641374 1122 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
RBFOX3A6NFN3 FER-209ENST00000618353 1420 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RBFOX3A6NFN3 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RBFOX3A6NFN3 ERMARD-205ENST00000418781 1841 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RBFOX3A6NFN3 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC5.48□□□□□ -1.53
RBFOX3A6NFN3 AP001157.1-201ENST00000550837 2339 ntBASIC5.48□□□□□ -1.53
RBFOX3A6NFN3 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
RBFOX3A6NFN3 SULT1C2-202ENST00000326853 2828 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RBFOX3A6NFN3 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.48□□□□□ -1.53
RBFOX3A6NFN3 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
RBFOX3A6NFN3 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RBFOX3A6NFN3 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
RBFOX3A6NFN3 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
RBFOX3A6NFN3 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RBFOX3A6NFN3 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RBFOX3A6NFN3 AC245100.4-203ENST00000635493 1357 ntTSL 5 BASIC5.48□□□□□ -1.53
RBFOX3A6NFN3 OR5E1P-201ENST00000305754 927 ntBASIC5.48□□□□□ -1.53
RBFOX3A6NFN3 RNA5SP172-201ENST00000365061 118 ntBASIC5.48□□□□□ -1.53
RBFOX3A6NFN3 S100A7-201ENST00000368722 442 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
RBFOX3A6NFN3 RPS24-202ENST00000372360 510 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
RBFOX3A6NFN3 SEC61G-202ENST00000395535 459 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
RBFOX3A6NFN3 NPM1P46-201ENST00000399556 865 ntBASIC5.48□□□□□ -1.53
RBFOX3A6NFN3 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC5.48□□□□□ -1.53
RBFOX3A6NFN3 AC096537.2-201ENST00000413707 714 ntBASIC5.48□□□□□ -1.53
RBFOX3A6NFN3 RBMY2FP-202ENST00000420346 1263 ntBASIC5.48□□□□□ -1.53
RBFOX3A6NFN3 AL391863.1-201ENST00000422776 743 ntTSL 3 BASIC5.48□□□□□ -1.53
RBFOX3A6NFN3 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.48□□□□□ -1.53
RBFOX3A6NFN3 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RBFOX3A6NFN3 AL731892.1-201ENST00000437364 1192 ntBASIC5.48□□□□□ -1.53
RBFOX3A6NFN3 AC231532.1-201ENST00000438584 312 ntBASIC5.48□□□□□ -1.53
RBFOX3A6NFN3 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms