Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 RNU4-64P-201ENST00000410795 131 ntBASIC6.14□□□□□ -1.43
SSX3Q99909 BCRP8-201ENST00000412037 255 ntBASIC6.14□□□□□ -1.43
SSX3Q99909 AC092042.2-201ENST00000417304 331 ntBASIC6.14□□□□□ -1.43
SSX3Q99909 USP32P1-203ENST00000417524 1014 ntTSL 5 BASIC6.14□□□□□ -1.43
SSX3Q99909 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
SSX3Q99909 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC6.14□□□□□ -1.43
SSX3Q99909 GAPDHP73-201ENST00000423411 1007 ntBASIC6.14□□□□□ -1.43
SSX3Q99909 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC6.14□□□□□ -1.43
SSX3Q99909 TULP3P1-201ENST00000442322 816 ntTSL 3 BASIC6.14□□□□□ -1.43
SSX3Q99909 CT45A11P-201ENST00000448043 1134 ntBASIC6.14□□□□□ -1.43
SSX3Q99909 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC6.14□□□□□ -1.43
SSX3Q99909 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SSX3Q99909 RN7SL233P-201ENST00000469988 277 ntBASIC6.14□□□□□ -1.43
SSX3Q99909 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC6.14□□□□□ -1.43
SSX3Q99909 AC233724.1-201ENST00000503894 233 ntBASIC6.14□□□□□ -1.43
SSX3Q99909 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC6.14□□□□□ -1.43
SSX3Q99909 LINC01094-206ENST00000514130 594 ntTSL 4 BASIC6.14□□□□□ -1.43
SSX3Q99909 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC6.14□□□□□ -1.43
SSX3Q99909 RNU6-1334P-201ENST00000516032 105 ntBASIC6.14□□□□□ -1.43
SSX3Q99909 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC6.14□□□□□ -1.43
SSX3Q99909 AL358332.1-201ENST00000555649 813 ntTSL 5 BASIC6.14□□□□□ -1.43
SSX3Q99909 AC013457.1-201ENST00000556770 1011 ntTSL 3 BASIC6.14□□□□□ -1.43
SSX3Q99909 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC6.14□□□□□ -1.43
SSX3Q99909 AC103724.4-201ENST00000605981 292 ntBASIC6.14□□□□□ -1.43
SSX3Q99909 FAM27E3-202ENST00000614611 340 ntBASIC6.14□□□□□ -1.43
SSX3Q99909 MIR6731-201ENST00000614863 72 ntBASIC6.14□□□□□ -1.43
SSX3Q99909 AC006449.1-201ENST00000616263 571 ntTSL 4 BASIC6.14□□□□□ -1.43
SSX3Q99909 PART1_3.1-201ENST00000619680 131 ntBASIC6.14□□□□□ -1.43
SSX3Q99909 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC6.14□□□□□ -1.43
SSX3Q99909 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC6.14□□□□□ -1.43
SSX3Q99909 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.14□□□□□ -1.43
SSX3Q99909 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SSX3Q99909 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SSX3Q99909 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
SSX3Q99909 AC137056.2-201ENST00000624055 1958 ntBASIC6.14□□□□□ -1.43
SSX3Q99909 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SSX3Q99909 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SSX3Q99909 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
SSX3Q99909 ZNF710-AS1-202ENST00000620791 2133 ntBASIC6.14□□□□□ -1.43
SSX3Q99909 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SSX3Q99909 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC6.14□□□□□ -1.43
SSX3Q99909 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SSX3Q99909 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC6.14□□□□□ -1.43
SSX3Q99909 AC130360.2-201ENST00000533477 1556 ntBASIC6.14□□□□□ -1.43
SSX3Q99909 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.14□□□□□ -1.43
SSX3Q99909 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC6.14□□□□□ -1.43
SSX3Q99909 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
SSX3Q99909 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.13□□□□□ -1.43
SSX3Q99909 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSX3Q99909 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SSX3Q99909 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC6.13□□□□□ -1.43
SSX3Q99909 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC6.13□□□□□ -1.43
SSX3Q99909 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
SSX3Q99909 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SSX3Q99909 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSX3Q99909 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSX3Q99909 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SSX3Q99909 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
SSX3Q99909 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SSX3Q99909 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.13□□□□□ -1.43
SSX3Q99909 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSX3Q99909 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSX3Q99909 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
SSX3Q99909 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSX3Q99909 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSX3Q99909 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSX3Q99909 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SSX3Q99909 SRI-202ENST00000394641 653 ntTSL 2 BASIC6.13□□□□□ -1.43
SSX3Q99909 IL6-202ENST00000401630 765 ntTSL 5 BASIC6.13□□□□□ -1.43
SSX3Q99909 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC6.13□□□□□ -1.43
SSX3Q99909 AC019055.1-201ENST00000432822 443 ntTSL 3 BASIC6.13□□□□□ -1.43
SSX3Q99909 ATP5LP4-201ENST00000434169 307 ntBASIC6.13□□□□□ -1.43
SSX3Q99909 CR391992.1-201ENST00000438601 394 ntBASIC6.13□□□□□ -1.43
SSX3Q99909 AC011742.2-201ENST00000443818 352 ntBASIC6.13□□□□□ -1.43
SSX3Q99909 AL591379.2-201ENST00000450223 397 ntBASIC6.13□□□□□ -1.43
SSX3Q99909 AC012493.1-201ENST00000453252 760 ntBASIC6.13□□□□□ -1.43
SSX3Q99909 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC6.13□□□□□ -1.43
SSX3Q99909 AC128716.1-201ENST00000475129 166 ntBASIC6.13□□□□□ -1.43
SSX3Q99909 AC018475.1-201ENST00000478358 465 ntBASIC6.13□□□□□ -1.43
SSX3Q99909 AC079944.1-201ENST00000485426 495 ntBASIC6.13□□□□□ -1.43
SSX3Q99909 AC097263.1-201ENST00000496795 606 ntBASIC6.13□□□□□ -1.43
SSX3Q99909 AC095059.2-201ENST00000510601 933 ntBASIC6.13□□□□□ -1.43
SSX3Q99909 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
SSX3Q99909 BTF3P1-201ENST00000522014 495 ntBASIC6.13□□□□□ -1.43
SSX3Q99909 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC6.13□□□□□ -1.43
SSX3Q99909 AL049869.4-201ENST00000555669 178 ntBASIC6.13□□□□□ -1.43
SSX3Q99909 AC012181.2-201ENST00000570210 699 ntBASIC6.13□□□□□ -1.43
SSX3Q99909 AC136624.3-201ENST00000571660 567 ntTSL 5 BASIC6.13□□□□□ -1.43
SSX3Q99909 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC6.13□□□□□ -1.43
SSX3Q99909 AC007136.1-201ENST00000589141 199 ntBASIC6.13□□□□□ -1.43
SSX3Q99909 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC6.13□□□□□ -1.43
SSX3Q99909 AC012370.2-202ENST00000600508 1099 ntTSL 5 BASIC6.13□□□□□ -1.43
SSX3Q99909 LINC00632-203ENST00000602535 723 ntTSL 5 BASIC6.13□□□□□ -1.43
SSX3Q99909 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC6.13□□□□□ -1.43
SSX3Q99909 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC6.13□□□□□ -1.43
SSX3Q99909 AL451054.1-201ENST00000621770 772 ntBASIC6.13□□□□□ -1.43
SSX3Q99909 AC002094.5-201ENST00000623773 629 ntBASIC6.13□□□□□ -1.43
SSX3Q99909 LINC00595-211ENST00000634735 535 ntTSL 3 BASIC6.13□□□□□ -1.43
SSX3Q99909 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.13□□□□□ -1.43
SSX3Q99909 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms