Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 RPL5P27-201ENST00000437011 881 ntBASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 NUCKS1P1-201ENST00000452067 703 ntBASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 ANK3-213ENST00000486349 493 ntTSL 2 BASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 OR4C1P-201ENST00000530880 937 ntBASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 OR6M3P-201ENST00000531567 700 ntBASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 RN7SL131P-201ENST00000579043 256 ntBASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 MIR5010-201ENST00000582846 120 ntBASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 pRNA.9-201ENST00000618609 89 ntBASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 uc_338.37-201ENST00000620113 186 ntBASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 CASC19-232ENST00000641480 1244 ntBASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 RNA5SP177-201ENST00000410122 107 ntBASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 AL627308.2-201ENST00000420014 432 ntBASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 RN7SL776P-201ENST00000493390 268 ntBASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 AC105391.1-201ENST00000503155 1045 ntBASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 AC139272.1-201ENST00000505516 640 ntBASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 AC016559.1-201ENST00000511420 199 ntBASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 AK6-204ENST00000512561 587 ntTSL 5 BASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 AC103409.1-201ENST00000521199 564 ntTSL 5 BASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 IGLVI-42-201ENST00000522485 381 ntBASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 AC106795.5-201ENST00000623288 454 ntBASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 AL035563.1-201ENST00000609087 1539 ntBASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 CR1-203ENST00000367051 7469 ntTSL 5 BASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
CHMP4CQ96CF2 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 AC018765.1-201ENST00000623357 3446 ntBASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 AC122713.2-201ENST00000624942 3335 ntBASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 RNA5SP355-201ENST00000365317 135 ntBASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 RNA5SP238-201ENST00000365464 120 ntBASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 NRIR-201ENST00000366140 799 ntTSL 3 BASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 ZNF736P10Y-201ENST00000403990 1110 ntBASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 SNORA11D-201ENST00000408548 128 ntBASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 SNORA11E-201ENST00000408778 128 ntBASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 AC009413.1-201ENST00000414823 399 ntBASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 AC244033.1-201ENST00000426826 870 ntBASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 DBIL5P2-201ENST00000443827 253 ntBASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 AC019080.2-201ENST00000453859 394 ntBASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 RN7SL456P-201ENST00000469290 295 ntBASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC8.62□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms