Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 IGLJCOR18-201ENST00000584002 424 ntBASIC6.52□□□□□ -1.37
SSX4O60224 AL050343.1-203ENST00000586761 1290 ntTSL 3 BASIC6.52□□□□□ -1.37
SSX4O60224 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SSX4O60224 FRG2MP-201ENST00000613317 856 ntBASIC6.52□□□□□ -1.37
SSX4O60224 AL121985.3-201ENST00000620690 523 ntBASIC6.52□□□□□ -1.37
SSX4O60224 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC6.52□□□□□ -1.37
SSX4O60224 FGL2-202ENST00000637771 989 ntBASIC6.52□□□□□ -1.37
SSX4O60224 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC6.52□□□□□ -1.37
SSX4O60224 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
SSX4O60224 CPB2-AS1-204ENST00000606991 3218 ntTSL 2 BASIC6.52□□□□□ -1.37
SSX4O60224 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SSX4O60224 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SSX4O60224 AC245100.4-203ENST00000635493 1357 ntTSL 5 BASIC6.52□□□□□ -1.37
SSX4O60224 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
SSX4O60224 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SSX4O60224 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC6.52□□□□□ -1.37
SSX4O60224 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
SSX4O60224 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SSX4O60224 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
SSX4O60224 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.37
SSX4O60224 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC6.52□□□□□ -1.37
SSX4O60224 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SSX4O60224 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SSX4O60224 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SSX4O60224 MMP20-201ENST00000260228 1956 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SSX4O60224 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
SSX4O60224 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SSX4O60224 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.51□□□□□ -1.37
SSX4O60224 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
SSX4O60224 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
SSX4O60224 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.51□□□□□ -1.37
SSX4O60224 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SSX4O60224 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC6.51□□□□□ -1.37
SSX4O60224 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.51□□□□□ -1.37
SSX4O60224 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
SSX4O60224 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.51□□□□□ -1.37
SSX4O60224 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SSX4O60224 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
SSX4O60224 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC6.51□□□□□ -1.37
SSX4O60224 AL139327.1-201ENST00000382988 348 ntBASIC6.51□□□□□ -1.37
SSX4O60224 MIR27A-201ENST00000385073 78 ntBASIC6.51□□□□□ -1.37
SSX4O60224 AC121334.1-201ENST00000396414 802 ntBASIC6.51□□□□□ -1.37
SSX4O60224 GAPDHP73-201ENST00000423411 1007 ntBASIC6.51□□□□□ -1.37
SSX4O60224 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC6.51□□□□□ -1.37
SSX4O60224 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.51□□□□□ -1.37
SSX4O60224 NIP7P1-201ENST00000433227 512 ntBASIC6.51□□□□□ -1.37
SSX4O60224 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC6.51□□□□□ -1.37
SSX4O60224 PFN2-217ENST00000498307 556 ntTSL 4 BASIC6.51□□□□□ -1.37
SSX4O60224 AC083902.1-201ENST00000508578 359 ntTSL 5 BASIC6.51□□□□□ -1.37
SSX4O60224 OR10J9P-201ENST00000511932 987 ntBASIC6.51□□□□□ -1.37
SSX4O60224 AC017007.1-201ENST00000511960 415 ntBASIC6.51□□□□□ -1.37
SSX4O60224 AC113352.1-201ENST00000513196 666 ntBASIC6.51□□□□□ -1.37
SSX4O60224 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC6.51□□□□□ -1.37
SSX4O60224 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC6.51□□□□□ -1.37
SSX4O60224 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC6.51□□□□□ -1.37
SSX4O60224 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC6.51□□□□□ -1.37
SSX4O60224 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
SSX4O60224 ATP5J2P4-201ENST00000538774 267 ntBASIC6.51□□□□□ -1.37
SSX4O60224 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SSX4O60224 AC023080.1-201ENST00000551663 931 ntBASIC6.51□□□□□ -1.37
SSX4O60224 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC6.51□□□□□ -1.37
SSX4O60224 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC6.51□□□□□ -1.37
SSX4O60224 MT1B-202ENST00000562399 351 ntTSL 3 BASIC6.51□□□□□ -1.37
SSX4O60224 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC6.51□□□□□ -1.37
SSX4O60224 AC024614.1-201ENST00000577546 307 ntBASIC6.51□□□□□ -1.37
SSX4O60224 PRELID3BP3-201ENST00000584963 545 ntBASIC6.51□□□□□ -1.37
SSX4O60224 AC016629.2-201ENST00000597341 199 ntBASIC6.51□□□□□ -1.37
SSX4O60224 AC024451.4-201ENST00000602578 752 ntBASIC6.51□□□□□ -1.37
SSX4O60224 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC6.51□□□□□ -1.37
SSX4O60224 MIR6774-201ENST00000614651 70 ntBASIC6.51□□□□□ -1.37
SSX4O60224 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC6.51□□□□□ -1.37
SSX4O60224 pRNA.9-201ENST00000618609 89 ntBASIC6.51□□□□□ -1.37
SSX4O60224 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SSX4O60224 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC6.51□□□□□ -1.37
SSX4O60224 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SSX4O60224 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SSX4O60224 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SSX4O60224 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SSX4O60224 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SSX4O60224 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SSX4O60224 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC6.51□□□□□ -1.37
SSX4O60224 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SSX4O60224 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.51□□□□□ -1.37
SSX4O60224 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
SSX4O60224 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SSX4O60224 PSMC1P7-201ENST00000495689 1315 ntBASIC6.5□□□□□ -1.37
SSX4O60224 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSX4O60224 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.5□□□□□ -1.37
SSX4O60224 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.5□□□□□ -1.37
SSX4O60224 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.5□□□□□ -1.37
SSX4O60224 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.5□□□□□ -1.37
SSX4O60224 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SSX4O60224 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSX4O60224 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.5□□□□□ -1.37
SSX4O60224 AP002833.3-201ENST00000625075 2265 ntBASIC6.5□□□□□ -1.37
SSX4O60224 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SSX4O60224 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSX4O60224 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSX4O60224 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSX4O60224 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 144.9 ms