Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL354719.2-201ENST00000429530 1454 ntTSL 2 BASIC6.71□□□□□ -1.34
SNX18Q96RF0 AL359195.2-201ENST00000623657 4412 ntBASIC6.71□□□□□ -1.34
SNX18Q96RF0 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SNX18Q96RF0 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SNX18Q96RF0 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SNX18Q96RF0 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SNX18Q96RF0 GOT2P1-201ENST00000440922 1309 ntBASIC6.71□□□□□ -1.34
SNX18Q96RF0 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
SNX18Q96RF0 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SNX18Q96RF0 AP000547.3-204ENST00000588548 2523 ntBASIC6.71□□□□□ -1.34
SNX18Q96RF0 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
SNX18Q96RF0 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.71□□□□□ -1.34
SNX18Q96RF0 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC6.71□□□□□ -1.34
SNX18Q96RF0 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
SNX18Q96RF0 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SNX18Q96RF0 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SNX18Q96RF0 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SNX18Q96RF0 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
SNX18Q96RF0 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SNX18Q96RF0 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SNX18Q96RF0 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.7□□□□□ -1.34
SNX18Q96RF0 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
SNX18Q96RF0 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
SNX18Q96RF0 MARK2P10-201ENST00000454959 1437 ntBASIC6.7□□□□□ -1.34
SNX18Q96RF0 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.7□□□□□ -1.34
SNX18Q96RF0 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.7□□□□□ -1.34
SNX18Q96RF0 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
SNX18Q96RF0 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SNX18Q96RF0 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SNX18Q96RF0 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC6.7□□□□□ -1.34
SNX18Q96RF0 RNA5SP79-201ENST00000365193 109 ntBASIC6.7□□□□□ -1.34
SNX18Q96RF0 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
SNX18Q96RF0 CNN3P1-201ENST00000401596 935 ntBASIC6.7□□□□□ -1.34
SNX18Q96RF0 DHFRP5-201ENST00000406944 564 ntBASIC6.7□□□□□ -1.34
SNX18Q96RF0 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC6.7□□□□□ -1.34
SNX18Q96RF0 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.7□□□□□ -1.34
SNX18Q96RF0 AL773545.3-201ENST00000414297 706 ntBASIC6.7□□□□□ -1.34
SNX18Q96RF0 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SNX18Q96RF0 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.7□□□□□ -1.34
SNX18Q96RF0 AL591846.2-201ENST00000425161 358 ntTSL 2 BASIC6.7□□□□□ -1.34
SNX18Q96RF0 PAICSP2-201ENST00000429118 1150 ntBASIC6.7□□□□□ -1.34
SNX18Q96RF0 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC6.7□□□□□ -1.34
SNX18Q96RF0 AL121885.2-201ENST00000440255 819 ntTSL 3 BASIC6.7□□□□□ -1.34
SNX18Q96RF0 PCMTD1P3-201ENST00000451824 472 ntBASIC6.7□□□□□ -1.34
SNX18Q96RF0 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.7□□□□□ -1.34
SNX18Q96RF0 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SNX18Q96RF0 AC068522.1-201ENST00000482895 345 ntBASIC6.7□□□□□ -1.34
SNX18Q96RF0 PDPN-205ENST00000487038 607 ntTSL 2 BASIC6.7□□□□□ -1.34
SNX18Q96RF0 FTH1P8-201ENST00000498161 514 ntBASIC6.7□□□□□ -1.34
SNX18Q96RF0 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC6.7□□□□□ -1.34
SNX18Q96RF0 AC023886.1-201ENST00000506057 685 ntTSL 3 BASIC6.7□□□□□ -1.34
SNX18Q96RF0 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC6.7□□□□□ -1.34
SNX18Q96RF0 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC6.7□□□□□ -1.34
SNX18Q96RF0 AC025423.2-201ENST00000537570 439 ntBASIC6.7□□□□□ -1.34
SNX18Q96RF0 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC6.7□□□□□ -1.34
SNX18Q96RF0 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC6.7□□□□□ -1.34
SNX18Q96RF0 RPL41P2-201ENST00000544920 409 ntBASIC6.7□□□□□ -1.34
SNX18Q96RF0 DAZAP2-208ENST00000549555 872 ntTSL 2 BASIC6.7□□□□□ -1.34
SNX18Q96RF0 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC6.7□□□□□ -1.34
SNX18Q96RF0 SUPT16H-204ENST00000555943 915 ntTSL 2 BASIC6.7□□□□□ -1.34
SNX18Q96RF0 RN7SL786P-201ENST00000579130 298 ntBASIC6.7□□□□□ -1.34
SNX18Q96RF0 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC6.7□□□□□ -1.34
SNX18Q96RF0 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC6.7□□□□□ -1.34
SNX18Q96RF0 STARD6-204ENST00000584040 660 ntTSL 3 BASIC6.7□□□□□ -1.34
SNX18Q96RF0 AC011472.3-201ENST00000586051 906 ntTSL 3 BASIC6.7□□□□□ -1.34
SNX18Q96RF0 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC6.7□□□□□ -1.34
SNX18Q96RF0 AP001120.4-201ENST00000590231 108 ntBASIC6.7□□□□□ -1.34
SNX18Q96RF0 ZNF525-206ENST00000593918 590 ntTSL 5 BASIC6.7□□□□□ -1.34
SNX18Q96RF0 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6.7□□□□□ -1.34
SNX18Q96RF0 AC143336.1-201ENST00000614164 836 ntBASIC6.7□□□□□ -1.34
SNX18Q96RF0 AC253576.2-201ENST00000618815 580 ntBASIC6.7□□□□□ -1.34
SNX18Q96RF0 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC6.7□□□□□ -1.34
SNX18Q96RF0 MTCO1P1-201ENST00000624263 1081 ntBASIC6.7□□□□□ -1.34
SNX18Q96RF0 AC073263.3-201ENST00000624449 858 ntBASIC6.7□□□□□ -1.34
SNX18Q96RF0 AC129908.1-201ENST00000624553 648 ntBASIC6.7□□□□□ -1.34
SNX18Q96RF0 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC6.7□□□□□ -1.34
SNX18Q96RF0 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC6.7□□□□□ -1.34
SNX18Q96RF0 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.7□□□□□ -1.34
SNX18Q96RF0 AC112243.1-201ENST00000623949 3851 ntBASIC6.7□□□□□ -1.34
SNX18Q96RF0 AL161891.1-201ENST00000621575 4636 ntBASIC6.7□□□□□ -1.34
SNX18Q96RF0 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SNX18Q96RF0 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SNX18Q96RF0 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SNX18Q96RF0 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SNX18Q96RF0 EVI2A-203ENST00000462804 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
SNX18Q96RF0 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
SNX18Q96RF0 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
SNX18Q96RF0 IARS-205ENST00000443024 4341 ntTSL 5 BASIC6.7□□□□□ -1.34
SNX18Q96RF0 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
SNX18Q96RF0 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.7□□□□□ -1.34
SNX18Q96RF0 AC012213.2-201ENST00000562917 4597 ntBASIC6.7□□□□□ -1.34
SNX18Q96RF0 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SNX18Q96RF0 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
SNX18Q96RF0 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SNX18Q96RF0 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC6.7□□□□□ -1.34
SNX18Q96RF0 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
SNX18Q96RF0 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.69□□□□□ -1.34
SNX18Q96RF0 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.69□□□□□ -1.34
SNX18Q96RF0 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.69□□□□□ -1.34
SNX18Q96RF0 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms