Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RHBDL3P58872 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RHBDL3P58872 AC018688.1-201ENST00000636528 1754 ntBASIC8.41□□□□□ -1.06
RHBDL3P58872 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
RHBDL3P58872 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RHBDL3P58872 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC8.41□□□□□ -1.06
RHBDL3P58872 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
RHBDL3P58872 ERG-205ENST00000398910 4954 ntTSL 5 BASIC8.41□□□□□ -1.06
RHBDL3P58872 CD86-209ENST00000493101 1572 ntTSL 2 BASIC8.41□□□□□ -1.06
RHBDL3P58872 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RHBDL3P58872 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC8.41□□□□□ -1.06
RHBDL3P58872 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC8.41□□□□□ -1.06
RHBDL3P58872 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
RHBDL3P58872 RPL5P8-201ENST00000396820 815 ntBASIC8.41□□□□□ -1.06
RHBDL3P58872 AL353133.1-201ENST00000407695 401 ntBASIC8.41□□□□□ -1.06
RHBDL3P58872 AL035696.2-201ENST00000407941 709 ntBASIC8.41□□□□□ -1.06
RHBDL3P58872 AL590240.2-201ENST00000413370 894 ntBASIC8.41□□□□□ -1.06
RHBDL3P58872 AP003385.1-201ENST00000426387 893 ntBASIC8.41□□□□□ -1.06
RHBDL3P58872 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC8.41□□□□□ -1.06
RHBDL3P58872 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC8.41□□□□□ -1.06
RHBDL3P58872 RPL3P11-201ENST00000434028 1146 ntBASIC8.41□□□□□ -1.06
RHBDL3P58872 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC8.41□□□□□ -1.06
RHBDL3P58872 WDR82P2-201ENST00000444540 928 ntBASIC8.41□□□□□ -1.06
RHBDL3P58872 RPL7L1P11-201ENST00000446092 721 ntBASIC8.41□□□□□ -1.06
RHBDL3P58872 AL354714.5-201ENST00000450131 590 ntBASIC8.41□□□□□ -1.06
RHBDL3P58872 NUCKS1P1-201ENST00000452067 703 ntBASIC8.41□□□□□ -1.06
RHBDL3P58872 AC022080.2-201ENST00000452932 533 ntBASIC8.41□□□□□ -1.06
RHBDL3P58872 NREP-217ENST00000509025 987 ntTSL 3 BASIC8.41□□□□□ -1.06
RHBDL3P58872 NREP-223ENST00000515855 801 ntTSL 4 BASIC8.41□□□□□ -1.06
RHBDL3P58872 OR7E154P-201ENST00000525174 932 ntBASIC8.41□□□□□ -1.06
RHBDL3P58872 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC8.41□□□□□ -1.06
RHBDL3P58872 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC8.41□□□□□ -1.06
RHBDL3P58872 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC8.41□□□□□ -1.06
RHBDL3P58872 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC8.41□□□□□ -1.06
RHBDL3P58872 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC8.41□□□□□ -1.06
RHBDL3P58872 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC8.41□□□□□ -1.06
RHBDL3P58872 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC8.41□□□□□ -1.06
RHBDL3P58872 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
RHBDL3P58872 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
RHBDL3P58872 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RHBDL3P58872 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RHBDL3P58872 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RHBDL3P58872 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
RHBDL3P58872 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC8.41□□□□□ -1.06
RHBDL3P58872 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC8.41□□□□□ -1.06
RHBDL3P58872 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
RHBDL3P58872 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC8.4□□□□□ -1.06
RHBDL3P58872 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
RHBDL3P58872 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
RHBDL3P58872 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
RHBDL3P58872 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
RHBDL3P58872 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
RHBDL3P58872 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC8.4□□□□□ -1.06
RHBDL3P58872 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC8.4□□□□□ -1.06
RHBDL3P58872 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
RHBDL3P58872 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
RHBDL3P58872 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
RHBDL3P58872 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC8.4□□□□□ -1.06
RHBDL3P58872 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
RHBDL3P58872 C1D-202ENST00000407324 1379 ntTSL 3 BASIC8.4□□□□□ -1.06
RHBDL3P58872 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
RHBDL3P58872 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
RHBDL3P58872 AC233968.1-201ENST00000611212 1300 ntBASIC8.4□□□□□ -1.06
RHBDL3P58872 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
RHBDL3P58872 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
RHBDL3P58872 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
RHBDL3P58872 RN7SKP191-201ENST00000364713 306 ntBASIC8.4□□□□□ -1.06
RHBDL3P58872 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC8.4□□□□□ -1.06
RHBDL3P58872 CFAP61-203ENST00000377293 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
RHBDL3P58872 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC8.4□□□□□ -1.06
RHBDL3P58872 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC8.4□□□□□ -1.06
RHBDL3P58872 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC8.4□□□□□ -1.06
RHBDL3P58872 PTPN2P1-201ENST00000423212 1072 ntBASIC8.4□□□□□ -1.06
RHBDL3P58872 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
RHBDL3P58872 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
RHBDL3P58872 TRBV29OR9-2-201ENST00000427589 333 ntBASIC8.4□□□□□ -1.06
RHBDL3P58872 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC8.4□□□□□ -1.06
RHBDL3P58872 AC114755.4-201ENST00000439114 443 ntBASIC8.4□□□□□ -1.06
RHBDL3P58872 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC8.4□□□□□ -1.06
RHBDL3P58872 AGKP1-201ENST00000455254 1263 ntBASIC8.4□□□□□ -1.06
RHBDL3P58872 AL096803.1-201ENST00000456921 1021 ntBASIC8.4□□□□□ -1.06
RHBDL3P58872 EIF4E2P2-201ENST00000492033 736 ntBASIC8.4□□□□□ -1.06
RHBDL3P58872 AC009567.2-201ENST00000502989 349 ntBASIC8.4□□□□□ -1.06
RHBDL3P58872 AC027801.3-201ENST00000515049 698 ntBASIC8.4□□□□□ -1.06
RHBDL3P58872 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC8.4□□□□□ -1.06
RHBDL3P58872 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC8.4□□□□□ -1.06
RHBDL3P58872 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC8.4□□□□□ -1.06
RHBDL3P58872 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC8.4□□□□□ -1.06
RHBDL3P58872 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
RHBDL3P58872 RPS4XP21-201ENST00000603814 750 ntBASIC8.4□□□□□ -1.06
RHBDL3P58872 AC211486.4-201ENST00000621495 113 ntBASIC8.4□□□□□ -1.06
RHBDL3P58872 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC8.4□□□□□ -1.06
RHBDL3P58872 MBD5-221ENST00000637159 902 ntTSL 5 BASIC8.4□□□□□ -1.06
RHBDL3P58872 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
RHBDL3P58872 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC8.4□□□□□ -1.06
RHBDL3P58872 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC8.4□□□□□ -1.06
RHBDL3P58872 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC8.4□□□□□ -1.07
RHBDL3P58872 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
RHBDL3P58872 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
RHBDL3P58872 DAZ1-202ENST00000405239 4421 ntAPPRIS P5 TSL 1 (best) BASIC8.4□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms