Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AL353151.1-201ENST00000402406 604 ntBASIC6.55□□□□□ -1.36
SSX4O60224 AL139806.1-201ENST00000403057 1002 ntBASIC6.55□□□□□ -1.36
SSX4O60224 RN7SKP117-201ENST00000410175 264 ntBASIC6.55□□□□□ -1.36
SSX4O60224 LINC01392-201ENST00000419883 565 ntTSL 5 BASIC6.55□□□□□ -1.36
SSX4O60224 AC093580.1-201ENST00000420549 671 ntTSL 3 BASIC6.55□□□□□ -1.36
SSX4O60224 FDPSP6-201ENST00000425091 512 ntBASIC6.55□□□□□ -1.36
SSX4O60224 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SSX4O60224 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.55□□□□□ -1.36
SSX4O60224 BX322234.2-202ENST00000435612 479 ntTSL 3 BASIC6.55□□□□□ -1.36
SSX4O60224 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC6.55□□□□□ -1.36
SSX4O60224 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.55□□□□□ -1.36
SSX4O60224 AC234782.3-201ENST00000461229 433 ntBASIC6.55□□□□□ -1.36
SSX4O60224 RN7SL153P-201ENST00000486501 292 ntBASIC6.55□□□□□ -1.36
SSX4O60224 DKK2-202ENST00000510463 908 ntTSL 3 BASIC6.55□□□□□ -1.36
SSX4O60224 AC022441.1-201ENST00000512599 794 ntTSL 3 BASIC6.55□□□□□ -1.36
SSX4O60224 AC008677.3-201ENST00000519146 666 ntBASIC6.55□□□□□ -1.36
SSX4O60224 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC6.55□□□□□ -1.36
SSX4O60224 AC090589.2-201ENST00000532022 332 ntTSL 3 BASIC6.55□□□□□ -1.36
SSX4O60224 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
SSX4O60224 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC6.55□□□□□ -1.36
SSX4O60224 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC6.55□□□□□ -1.36
SSX4O60224 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC6.55□□□□□ -1.36
SSX4O60224 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC6.55□□□□□ -1.36
SSX4O60224 EXOSC3P2-201ENST00000594464 497 ntBASIC6.55□□□□□ -1.36
SSX4O60224 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC6.55□□□□□ -1.36
SSX4O60224 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC6.55□□□□□ -1.36
SSX4O60224 5S_rRNA.20-201ENST00000612104 118 ntBASIC6.55□□□□□ -1.36
SSX4O60224 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.55□□□□□ -1.36
SSX4O60224 AL133320.1-201ENST00000621423 2352 ntBASIC6.55□□□□□ -1.36
SSX4O60224 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SSX4O60224 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.55□□□□□ -1.36
SSX4O60224 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.55□□□□□ -1.36
SSX4O60224 AC130456.1-201ENST00000565085 1363 ntBASIC6.55□□□□□ -1.36
SSX4O60224 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
SSX4O60224 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SSX4O60224 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
SSX4O60224 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
SSX4O60224 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.55□□□□□ -1.36
SSX4O60224 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SSX4O60224 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SSX4O60224 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SSX4O60224 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
SSX4O60224 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
SSX4O60224 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SSX4O60224 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
SSX4O60224 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
SSX4O60224 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SSX4O60224 KYNUP2-201ENST00000582280 1329 ntBASIC6.54□□□□□ -1.36
SSX4O60224 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SSX4O60224 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
SSX4O60224 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC6.54□□□□□ -1.36
SSX4O60224 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.54□□□□□ -1.36
SSX4O60224 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SSX4O60224 UG0898H09-202ENST00000623646 7040 ntBASIC6.54□□□□□ -1.36
SSX4O60224 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SSX4O60224 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC6.54□□□□□ -1.36
SSX4O60224 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SSX4O60224 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SSX4O60224 RN7SKP30-201ENST00000411373 334 ntBASIC6.54□□□□□ -1.36
SSX4O60224 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC6.54□□□□□ -1.36
SSX4O60224 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC6.54□□□□□ -1.36
SSX4O60224 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SSX4O60224 AC012560.1-202ENST00000421324 535 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SSX4O60224 RPL6P2-201ENST00000425480 783 ntBASIC6.54□□□□□ -1.36
SSX4O60224 AL138479.1-201ENST00000426913 484 ntBASIC6.54□□□□□ -1.36
SSX4O60224 VDAC2P3-201ENST00000430995 828 ntBASIC6.54□□□□□ -1.36
SSX4O60224 AL354983.1-201ENST00000434580 906 ntBASIC6.54□□□□□ -1.36
SSX4O60224 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SSX4O60224 AC091730.1-201ENST00000440455 692 ntTSL 3 BASIC6.54□□□□□ -1.36
SSX4O60224 AL158214.1-201ENST00000444423 404 ntBASIC6.54□□□□□ -1.36
SSX4O60224 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC6.54□□□□□ -1.36
SSX4O60224 RPL36AP55-201ENST00000454114 305 ntBASIC6.54□□□□□ -1.36
SSX4O60224 RN7SL55P-201ENST00000464534 297 ntBASIC6.54□□□□□ -1.36
SSX4O60224 RN7SL751P-201ENST00000473281 284 ntBASIC6.54□□□□□ -1.36
SSX4O60224 FTH1P23-201ENST00000492727 550 ntBASIC6.54□□□□□ -1.36
SSX4O60224 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC6.54□□□□□ -1.36
SSX4O60224 AP004607.5-201ENST00000532034 217 ntBASIC6.54□□□□□ -1.36
SSX4O60224 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC6.54□□□□□ -1.36
SSX4O60224 TSPAN8-203ENST00000546561 1168 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SSX4O60224 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC6.54□□□□□ -1.36
SSX4O60224 AC044860.3-201ENST00000559957 368 ntBASIC6.54□□□□□ -1.36
SSX4O60224 AP006587.6-201ENST00000582128 1091 ntBASIC6.54□□□□□ -1.36
SSX4O60224 AC005387.1-201ENST00000597837 352 ntTSL 3 BASIC6.54□□□□□ -1.36
SSX4O60224 AL451085.1-201ENST00000604546 690 ntBASIC6.54□□□□□ -1.36
SSX4O60224 RPS28P1-201ENST00000604589 187 ntBASIC6.54□□□□□ -1.36
SSX4O60224 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SSX4O60224 IGKV1OR1-1-201ENST00000613775 347 ntBASIC6.54□□□□□ -1.36
SSX4O60224 AC103564.3-201ENST00000621194 220 ntBASIC6.54□□□□□ -1.36
SSX4O60224 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC6.54□□□□□ -1.36
SSX4O60224 AC002094.5-201ENST00000623773 629 ntBASIC6.54□□□□□ -1.36
SSX4O60224 TEX41-279ENST00000629149 609 ntTSL 5 BASIC6.54□□□□□ -1.36
SSX4O60224 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SSX4O60224 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
SSX4O60224 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC6.54□□□□□ -1.36
SSX4O60224 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SSX4O60224 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC6.54□□□□□ -1.36
SSX4O60224 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SSX4O60224 AL353795.1-201ENST00000439134 1775 ntBASIC6.54□□□□□ -1.36
SSX4O60224 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
SSX4O60224 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms