Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 PLGLB1-201ENST00000355705 1169 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 RNA5SP379-201ENST00000364599 113 ntBASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 RNU6-1263P-201ENST00000384601 106 ntBASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 MIR137-201ENST00000385223 102 ntBASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 RN7SKP152-201ENST00000410444 315 ntBASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 GNAI2P2-201ENST00000417003 916 ntBASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 RPL17P17-201ENST00000419491 557 ntBASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 LINC00475-206ENST00000434944 796 ntTSL 3 BASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 HMGN1P6-201ENST00000438508 291 ntBASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 AL136452.1-201ENST00000448495 439 ntBASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 OR11Q1P-201ENST00000451582 877 ntBASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 OR5S1P-201ENST00000453063 951 ntBASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 AC084878.1-201ENST00000480555 648 ntBASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 LINC02428-203ENST00000513793 438 ntTSL 5 BASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 AC111000.1-201ENST00000514545 713 ntBASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 SNORA81.2-201ENST00000516868 170 ntBASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 C5orf58-202ENST00000517575 718 ntAPPRIS ALT2 TSL 3 BASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 AC084026.2-201ENST00000521101 642 ntTSL 3 BASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 AC091939.1-201ENST00000522704 691 ntTSL 3 BASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 KCTD21-AS1-204ENST00000528468 554 ntTSL 4 BASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 GLYCAM1-204ENST00000550226 781 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 LINC00929-205ENST00000557672 514 ntTSL 3 BASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 DNM1P34-202ENST00000567850 315 ntBASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 AC004224.2-201ENST00000574423 529 ntTSL 5 BASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 MIR4682-201ENST00000580643 80 ntBASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 AC004253.1-201ENST00000583236 488 ntTSL 5 BASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 AL161725.1-211ENST00000592805 889 ntTSL 5 BASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 AL139220.2-211ENST00000628234 754 ntTSL 5 BASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 KLF8-206ENST00000640927 1150 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 OR7A2P-202ENST00000641312 1219 ntBASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 AC008033.3-201ENST00000612531 1407 ntBASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 AC027313.1-201ENST00000509159 1666 ntBASIC7.35□□□□□ -1.23
HMGB1P1B2RPK0 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 DEPDC1B-202ENST00000453022 1569 ntTSL 2 BASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 RPL32-201ENST00000273223 567 ntTSL 3 BASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 OR9K2-201ENST00000305377 1122 ntBASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 OR13H1-201ENST00000338616 927 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 TGIF1-203ENST00000345133 1088 ntTSL 3 BASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 GAPDHP15-201ENST00000398586 975 ntBASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 AL121977.1-201ENST00000401636 979 ntBASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 RNU2-22P-201ENST00000411266 212 ntBASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 AL121916.1-201ENST00000429405 308 ntBASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 RPL12P19-201ENST00000429825 486 ntBASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 PSMA2-204ENST00000445517 683 ntTSL 2 BASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 FGF12-206ENST00000450716 768 ntTSL 5 BASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 AL356310.1-201ENST00000452024 585 ntTSL 3 BASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 AC080129.1-201ENST00000457815 406 ntTSL 3 BASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 AC117395.2-201ENST00000463122 1128 ntBASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 RN7SL160P-201ENST00000468558 284 ntBASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 SEPT7P6-201ENST00000469999 1143 ntBASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 RN7SL861P-201ENST00000473793 285 ntBASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 SNX18P27-201ENST00000523611 779 ntBASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 PRB4-203ENST00000535904 796 ntAPPRIS P3 TSL 2 BASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 AC009248.1-201ENST00000548155 735 ntBASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 ENSAP2-201ENST00000554405 352 ntBASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 AC007614.3-201ENST00000564875 654 ntTSL 3 BASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 AC024270.3-201ENST00000565513 396 ntTSL 3 BASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 AL023284.3-202ENST00000571188 543 ntTSL 5 BASIC7.34□□□□□ -1.23
HMGB1P1B2RPK0 AC073911.1-201ENST00000592296 504 ntTSL 5 BASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms