Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC106883.1-201ENST00000418805 562 ntBASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 AC012560.1-202ENST00000421324 535 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 AL121882.1-201ENST00000422893 417 ntBASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 GAPDHP55-201ENST00000423136 803 ntBASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 UBE2D3P3-201ENST00000426992 425 ntBASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 AC019055.1-201ENST00000432822 443 ntTSL 3 BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 AC006070.1-201ENST00000508151 193 ntBASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 AC095059.2-201ENST00000510601 933 ntBASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 AP003032.2-201ENST00000533697 686 ntTSL 3 BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 ZKSCAN7P1-201ENST00000543668 673 ntBASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 YWHAZP1-201ENST00000556286 722 ntBASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 AC027176.2-201ENST00000559166 746 ntBASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 AP003071.2-201ENST00000562772 990 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 AC093283.1-201ENST00000565306 1075 ntBASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 CYP4A44P-201ENST00000569984 154 ntBASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 AF230666.2-201ENST00000602328 725 ntBASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 AC135178.6-201ENST00000605314 398 ntBASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 AL096855.2-201ENST00000605785 369 ntBASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 AC103724.4-201ENST00000605981 292 ntBASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 AL355802.4-201ENST00000607635 548 ntBASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 AL451054.1-201ENST00000621770 772 ntBASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 AC087893.2-201ENST00000623272 255 ntBASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 LINC00595-211ENST00000634735 535 ntTSL 3 BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 OR5AU1-204ENST00000641822 1197 ntBASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 LINC01829-202ENST00000433133 2100 ntTSL 2 BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 TM4SF1-201ENST00000305366 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 MAPK10-281ENST00000641170 3070 ntBASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 APP-209ENST00000440126 2846 ntTSL 2 BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 LINC02208-201ENST00000506769 2803 ntTSL 5 BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 Z99129.4-201ENST00000624649 2435 ntBASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 RN7SKP23-201ENST00000625159 4301 ntBASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 AC036108.4-201ENST00000611654 2516 ntBASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 RN7SKP74-201ENST00000362849 309 ntBASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 RNU6-670P-201ENST00000364312 104 ntBASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 ANAPC10P1-201ENST00000395991 556 ntBASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 MTND4P13-201ENST00000402078 1023 ntBASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 MTCO2P8-201ENST00000412213 658 ntBASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 AC009237.9-201ENST00000414800 347 ntBASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 AC023141.10-201ENST00000415634 200 ntBASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 RPL36P1-201ENST00000419720 225 ntBASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 PPIL1P1-201ENST00000423936 499 ntBASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 AJ239321.1-201ENST00000424255 564 ntBASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 ATP5LP4-201ENST00000434169 307 ntBASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 AL591379.2-201ENST00000450223 397 ntBASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 TDGF1P6-201ENST00000463873 448 ntBASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 AC078857.1-201ENST00000469870 667 ntBASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 AC018475.1-201ENST00000478358 465 ntBASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 RN7SL332P-201ENST00000482163 254 ntBASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 AC079944.1-201ENST00000485426 495 ntBASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 MTCO2P9-201ENST00000503214 694 ntBASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 AC117383.2-201ENST00000514722 322 ntBASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 AC021733.2-201ENST00000518830 497 ntBASIC7.42□□□□□ -1.22
TRIM48Q8IWZ4 AC034205.1-201ENST00000520621 638 ntBASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms