Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 AC105391.1-201ENST00000503155 1045 ntBASIC6.3□□□□□ -1.4
FOXG1P55316 RPS23-208ENST00000512493 443 ntTSL 3 BASIC6.3□□□□□ -1.4
FOXG1P55316 AC120036.3-201ENST00000517826 292 ntBASIC6.3□□□□□ -1.4
FOXG1P55316 OXR1-212ENST00000521592 993 ntTSL 5 BASIC6.3□□□□□ -1.4
FOXG1P55316 NDUFA3P2-201ENST00000531434 232 ntBASIC6.3□□□□□ -1.4
FOXG1P55316 AP004607.5-201ENST00000532034 217 ntBASIC6.3□□□□□ -1.4
FOXG1P55316 OR4A1P-201ENST00000532342 920 ntBASIC6.3□□□□□ -1.4
FOXG1P55316 OR7E161P-201ENST00000533722 967 ntBASIC6.3□□□□□ -1.4
FOXG1P55316 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC6.3□□□□□ -1.4
FOXG1P55316 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC6.3□□□□□ -1.4
FOXG1P55316 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC6.3□□□□□ -1.4
FOXG1P55316 AC090241.1-201ENST00000587732 621 ntBASIC6.3□□□□□ -1.4
FOXG1P55316 AC090330.1-201ENST00000588646 764 ntBASIC6.3□□□□□ -1.4
FOXG1P55316 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC6.3□□□□□ -1.4
FOXG1P55316 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC6.3□□□□□ -1.4
FOXG1P55316 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
FOXG1P55316 AC097376.1-201ENST00000602907 997 ntBASIC6.3□□□□□ -1.4
FOXG1P55316 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC6.3□□□□□ -1.4
FOXG1P55316 AC091544.5-201ENST00000620192 3815 ntBASIC6.3□□□□□ -1.4
FOXG1P55316 AC097520.1-201ENST00000624435 385 ntBASIC6.3□□□□□ -1.4
FOXG1P55316 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC6.3□□□□□ -1.4
FOXG1P55316 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC6.3□□□□□ -1.4
FOXG1P55316 ENSA-215ENST00000638926 360 ntTSL 5 BASIC6.3□□□□□ -1.4
FOXG1P55316 JAML-213ENST00000640745 951 ntTSL 5 BASIC6.3□□□□□ -1.4
FOXG1P55316 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC6.3□□□□□ -1.4
FOXG1P55316 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
FOXG1P55316 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
FOXG1P55316 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
FOXG1P55316 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
FOXG1P55316 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC6.3□□□□□ -1.4
FOXG1P55316 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
FOXG1P55316 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
FOXG1P55316 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC6.3□□□□□ -1.4
FOXG1P55316 AL445250.1-203ENST00000641829 1535 ntBASIC6.3□□□□□ -1.4
FOXG1P55316 AC013268.3-201ENST00000262716 2324 ntBASIC6.3□□□□□ -1.4
FOXG1P55316 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
FOXG1P55316 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC6.29□□□□□ -1.4
FOXG1P55316 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.29□□□□□ -1.4
FOXG1P55316 HYDIN2-203ENST00000614586 13885 ntBASIC6.29□□□□□ -1.4
FOXG1P55316 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC6.29□□□□□ -1.4
FOXG1P55316 THAP12P3-201ENST00000456373 2266 ntBASIC6.29□□□□□ -1.4
FOXG1P55316 NF1P8-201ENST00000415351 1461 ntBASIC6.29□□□□□ -1.4
FOXG1P55316 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
FOXG1P55316 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC6.29□□□□□ -1.4
FOXG1P55316 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
FOXG1P55316 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
FOXG1P55316 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
FOXG1P55316 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
FOXG1P55316 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
FOXG1P55316 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
FOXG1P55316 MIR138-2-201ENST00000384916 84 ntBASIC6.29□□□□□ -1.4
FOXG1P55316 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
FOXG1P55316 RN7SKP137-201ENST00000411074 307 ntBASIC6.29□□□□□ -1.4
FOXG1P55316 AL139135.1-201ENST00000412675 209 ntBASIC6.29□□□□□ -1.4
FOXG1P55316 AL662791.3-201ENST00000413771 776 ntBASIC6.29□□□□□ -1.4
FOXG1P55316 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC6.29□□□□□ -1.4
FOXG1P55316 MICG-208ENST00000416822 132 ntBASIC6.29□□□□□ -1.4
FOXG1P55316 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
FOXG1P55316 AC073900.1-201ENST00000429766 776 ntBASIC6.29□□□□□ -1.4
FOXG1P55316 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC6.29□□□□□ -1.4
FOXG1P55316 AC010086.1-201ENST00000437359 1052 ntBASIC6.29□□□□□ -1.4
FOXG1P55316 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.29□□□□□ -1.4
FOXG1P55316 AC087499.3-202ENST00000441215 1173 ntBASIC6.29□□□□□ -1.4
FOXG1P55316 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
FOXG1P55316 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
FOXG1P55316 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC6.29□□□□□ -1.4
FOXG1P55316 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC6.29□□□□□ -1.4
FOXG1P55316 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.29□□□□□ -1.4
FOXG1P55316 AC091982.1-202ENST00000473923 343 ntBASIC6.29□□□□□ -1.4
FOXG1P55316 AC118282.1-201ENST00000506408 765 ntBASIC6.29□□□□□ -1.4
FOXG1P55316 AC146944.3-201ENST00000509969 371 ntBASIC6.29□□□□□ -1.4
FOXG1P55316 LINC01085-203ENST00000511195 326 ntBASIC6.29□□□□□ -1.4
FOXG1P55316 PGAM4P2-201ENST00000512491 721 ntBASIC6.29□□□□□ -1.4
FOXG1P55316 RNA5SP75-201ENST00000516841 111 ntBASIC6.29□□□□□ -1.4
FOXG1P55316 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC6.29□□□□□ -1.4
FOXG1P55316 CASP1P2-201ENST00000526830 1258 ntBASIC6.29□□□□□ -1.4
FOXG1P55316 RGS5-220ENST00000528689 566 ntTSL 5 BASIC6.29□□□□□ -1.4
FOXG1P55316 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC6.29□□□□□ -1.4
FOXG1P55316 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC6.29□□□□□ -1.4
FOXG1P55316 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC6.29□□□□□ -1.4
FOXG1P55316 CCDC58P1-201ENST00000578567 430 ntBASIC6.29□□□□□ -1.4
FOXG1P55316 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC6.29□□□□□ -1.4
FOXG1P55316 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC6.29□□□□□ -1.4
FOXG1P55316 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC6.29□□□□□ -1.4
FOXG1P55316 AC092960.1-201ENST00000604762 351 ntBASIC6.29□□□□□ -1.4
FOXG1P55316 AC007423.1-201ENST00000605009 627 ntBASIC6.29□□□□□ -1.4
FOXG1P55316 AL355333.1-201ENST00000605632 279 ntBASIC6.29□□□□□ -1.4
FOXG1P55316 AC100814.1-201ENST00000606963 623 ntBASIC6.29□□□□□ -1.4
FOXG1P55316 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
FOXG1P55316 AC017037.4-201ENST00000624526 826 ntBASIC6.29□□□□□ -1.4
FOXG1P55316 ASB8-218ENST00000629941 278 ntTSL 5 BASIC6.29□□□□□ -1.4
FOXG1P55316 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
FOXG1P55316 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
FOXG1P55316 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC6.29□□□□□ -1.4
FOXG1P55316 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.29□□□□□ -1.4
FOXG1P55316 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
FOXG1P55316 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
FOXG1P55316 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
FOXG1P55316 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
FOXG1P55316 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms