Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NOTCH3Q9UM47 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NOTCH3Q9UM47 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NOTCH3Q9UM47 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NOTCH3Q9UM47 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NOTCH3Q9UM47 CD177P1-201ENST00000606252 935 ntBASIC15.41■□□□□ 0.06
NOTCH3Q9UM47 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NOTCH3Q9UM47 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NOTCH3Q9UM47 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NOTCH3Q9UM47 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NOTCH3Q9UM47 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC15.41■□□□□ 0.06
NOTCH3Q9UM47 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
NOTCH3Q9UM47 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NOTCH3Q9UM47 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC15.41■□□□□ 0.06
NOTCH3Q9UM47 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC15.4■□□□□ 0.06
NOTCH3Q9UM47 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NOTCH3Q9UM47 KRASP1-201ENST00000407852 552 ntBASIC15.4■□□□□ 0.06
NOTCH3Q9UM47 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC15.4■□□□□ 0.06
NOTCH3Q9UM47 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NOTCH3Q9UM47 HES2-206ENST00000489730 730 ntTSL 2 BASIC15.4■□□□□ 0.06
NOTCH3Q9UM47 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC15.4■□□□□ 0.06
NOTCH3Q9UM47 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.4■□□□□ 0.06
NOTCH3Q9UM47 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC15.4■□□□□ 0.06
NOTCH3Q9UM47 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NOTCH3Q9UM47 AC110285.5-201ENST00000611501 352 ntBASIC15.4■□□□□ 0.06
NOTCH3Q9UM47 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC15.4■□□□□ 0.06
NOTCH3Q9UM47 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NOTCH3Q9UM47 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC15.4■□□□□ 0.06
NOTCH3Q9UM47 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC15.4■□□□□ 0.06
NOTCH3Q9UM47 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NOTCH3Q9UM47 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NOTCH3Q9UM47 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC15.4■□□□□ 0.06
NOTCH3Q9UM47 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NOTCH3Q9UM47 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.4■□□□□ 0.06
NOTCH3Q9UM47 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NOTCH3Q9UM47 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NOTCH3Q9UM47 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
NOTCH3Q9UM47 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NOTCH3Q9UM47 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NOTCH3Q9UM47 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
NOTCH3Q9UM47 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NOTCH3Q9UM47 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NOTCH3Q9UM47 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
NOTCH3Q9UM47 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
NOTCH3Q9UM47 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NOTCH3Q9UM47 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NOTCH3Q9UM47 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.06
NOTCH3Q9UM47 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NOTCH3Q9UM47 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NOTCH3Q9UM47 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC15.39■□□□□ 0.05
NOTCH3Q9UM47 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
NOTCH3Q9UM47 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NOTCH3Q9UM47 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NOTCH3Q9UM47 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NOTCH3Q9UM47 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.39■□□□□ 0.05
NOTCH3Q9UM47 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
NOTCH3Q9UM47 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NOTCH3Q9UM47 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NOTCH3Q9UM47 KRT8P9-201ENST00000558927 1449 ntBASIC15.39■□□□□ 0.05
NOTCH3Q9UM47 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC15.39■□□□□ 0.05
NOTCH3Q9UM47 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
NOTCH3Q9UM47 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NOTCH3Q9UM47 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NOTCH3Q9UM47 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NOTCH3Q9UM47 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC15.39■□□□□ 0.05
NOTCH3Q9UM47 SAPCD2P4-201ENST00000424595 1171 ntBASIC15.39■□□□□ 0.05
NOTCH3Q9UM47 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NOTCH3Q9UM47 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.39■□□□□ 0.05
NOTCH3Q9UM47 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NOTCH3Q9UM47 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NOTCH3Q9UM47 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NOTCH3Q9UM47 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NOTCH3Q9UM47 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NOTCH3Q9UM47 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NOTCH3Q9UM47 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NOTCH3Q9UM47 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NOTCH3Q9UM47 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NOTCH3Q9UM47 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
NOTCH3Q9UM47 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC15.38■□□□□ 0.05
NOTCH3Q9UM47 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC15.38■□□□□ 0.05
NOTCH3Q9UM47 PCDHAC2-203ENST00000615316 3011 ntBASIC15.38■□□□□ 0.05
NOTCH3Q9UM47 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC15.38■□□□□ 0.05
NOTCH3Q9UM47 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
NOTCH3Q9UM47 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
NOTCH3Q9UM47 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NOTCH3Q9UM47 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
NOTCH3Q9UM47 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC15.38■□□□□ 0.05
NOTCH3Q9UM47 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NOTCH3Q9UM47 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NOTCH3Q9UM47 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.38■□□□□ 0.05
NOTCH3Q9UM47 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
NOTCH3Q9UM47 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
NOTCH3Q9UM47 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC15.37■□□□□ 0.05
NOTCH3Q9UM47 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
NOTCH3Q9UM47 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NOTCH3Q9UM47 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NOTCH3Q9UM47 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.37■□□□□ 0.05
NOTCH3Q9UM47 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC15.37■□□□□ 0.05
NOTCH3Q9UM47 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NOTCH3Q9UM47 AL356652.1-201ENST00000615962 565 ntBASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms