Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.39■□□□□ 0.53
UBQLN4Q9NRR5 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.39■□□□□ 0.53
UBQLN4Q9NRR5 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBQLN4Q9NRR5 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBQLN4Q9NRR5 AC112907.3-201ENST00000577781 2400 ntBASIC18.39■□□□□ 0.53
UBQLN4Q9NRR5 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBQLN4Q9NRR5 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBQLN4Q9NRR5 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBQLN4Q9NRR5 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBQLN4Q9NRR5 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UBQLN4Q9NRR5 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
UBQLN4Q9NRR5 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBQLN4Q9NRR5 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBQLN4Q9NRR5 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.38■□□□□ 0.53
UBQLN4Q9NRR5 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBQLN4Q9NRR5 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBQLN4Q9NRR5 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBQLN4Q9NRR5 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBQLN4Q9NRR5 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBQLN4Q9NRR5 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
UBQLN4Q9NRR5 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.38■□□□□ 0.53
UBQLN4Q9NRR5 TCF3P1-201ENST00000423021 1937 ntBASIC18.38■□□□□ 0.53
UBQLN4Q9NRR5 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UBQLN4Q9NRR5 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBQLN4Q9NRR5 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
UBQLN4Q9NRR5 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
UBQLN4Q9NRR5 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
UBQLN4Q9NRR5 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.38■□□□□ 0.53
UBQLN4Q9NRR5 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBQLN4Q9NRR5 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.38■□□□□ 0.53
UBQLN4Q9NRR5 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.37■□□□□ 0.53
UBQLN4Q9NRR5 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN4Q9NRR5 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.37■□□□□ 0.53
UBQLN4Q9NRR5 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN4Q9NRR5 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
UBQLN4Q9NRR5 AL390719.1-204ENST00000412397 1219 ntBASIC18.37■□□□□ 0.53
UBQLN4Q9NRR5 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.37■□□□□ 0.53
UBQLN4Q9NRR5 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN4Q9NRR5 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.37■□□□□ 0.53
UBQLN4Q9NRR5 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN4Q9NRR5 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN4Q9NRR5 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN4Q9NRR5 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN4Q9NRR5 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN4Q9NRR5 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN4Q9NRR5 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN4Q9NRR5 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN4Q9NRR5 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN4Q9NRR5 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.37■□□□□ 0.53
UBQLN4Q9NRR5 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN4Q9NRR5 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN4Q9NRR5 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN4Q9NRR5 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.37■□□□□ 0.53
UBQLN4Q9NRR5 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN4Q9NRR5 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBQLN4Q9NRR5 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.36■□□□□ 0.53
UBQLN4Q9NRR5 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBQLN4Q9NRR5 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBQLN4Q9NRR5 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBQLN4Q9NRR5 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBQLN4Q9NRR5 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBQLN4Q9NRR5 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBQLN4Q9NRR5 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.36■□□□□ 0.53
UBQLN4Q9NRR5 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBQLN4Q9NRR5 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBQLN4Q9NRR5 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBQLN4Q9NRR5 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBQLN4Q9NRR5 AL355802.2-201ENST00000402069 882 ntBASIC18.36■□□□□ 0.53
UBQLN4Q9NRR5 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.36■□□□□ 0.53
UBQLN4Q9NRR5 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBQLN4Q9NRR5 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.36■□□□□ 0.53
UBQLN4Q9NRR5 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBQLN4Q9NRR5 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.36■□□□□ 0.53
UBQLN4Q9NRR5 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.36■□□□□ 0.53
UBQLN4Q9NRR5 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBQLN4Q9NRR5 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.36■□□□□ 0.53
UBQLN4Q9NRR5 AC098934.4-201ENST00000564127 592 ntBASIC18.36■□□□□ 0.53
UBQLN4Q9NRR5 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.36■□□□□ 0.53
UBQLN4Q9NRR5 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBQLN4Q9NRR5 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
UBQLN4Q9NRR5 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.35■□□□□ 0.53
UBQLN4Q9NRR5 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN4Q9NRR5 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN4Q9NRR5 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN4Q9NRR5 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
UBQLN4Q9NRR5 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
UBQLN4Q9NRR5 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN4Q9NRR5 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN4Q9NRR5 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN4Q9NRR5 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN4Q9NRR5 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.35■□□□□ 0.53
UBQLN4Q9NRR5 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN4Q9NRR5 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
UBQLN4Q9NRR5 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN4Q9NRR5 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.35■□□□□ 0.53
UBQLN4Q9NRR5 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.35■□□□□ 0.53
UBQLN4Q9NRR5 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN4Q9NRR5 AC005829.2-201ENST00000571422 1056 ntBASIC18.35■□□□□ 0.53
UBQLN4Q9NRR5 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.35■□□□□ 0.53
UBQLN4Q9NRR5 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms