Protein–RNA interactions for Protein: Q9H089

LSG1, Large subunit GTPase 1 homolog, humanhuman

Known RBP Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1Q9H089 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC23.9■■□□□ 1.42
LSG1Q9H089 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LSG1Q9H089 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
LSG1Q9H089 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
LSG1Q9H089 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC23.9■■□□□ 1.42
LSG1Q9H089 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC23.9■■□□□ 1.42
LSG1Q9H089 KRT16P6-202ENST00000425692 1426 ntBASIC23.9■■□□□ 1.42
LSG1Q9H089 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
LSG1Q9H089 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC23.89■■□□□ 1.42
LSG1Q9H089 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
LSG1Q9H089 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
LSG1Q9H089 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
LSG1Q9H089 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC23.89■■□□□ 1.42
LSG1Q9H089 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
LSG1Q9H089 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
LSG1Q9H089 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
LSG1Q9H089 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.89■■□□□ 1.41
LSG1Q9H089 NME6-213ENST00000451657 871 ntTSL 2 BASIC23.89■■□□□ 1.41
LSG1Q9H089 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC23.89■■□□□ 1.41
LSG1Q9H089 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC23.89■■□□□ 1.41
LSG1Q9H089 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.89■■□□□ 1.41
LSG1Q9H089 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
LSG1Q9H089 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
LSG1Q9H089 AC009237.14-201ENST00000609975 1594 ntBASIC23.89■■□□□ 1.41
LSG1Q9H089 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC23.89■■□□□ 1.41
LSG1Q9H089 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
LSG1Q9H089 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
LSG1Q9H089 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
LSG1Q9H089 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC23.89■■□□□ 1.41
LSG1Q9H089 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
LSG1Q9H089 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
LSG1Q9H089 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
LSG1Q9H089 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
LSG1Q9H089 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
LSG1Q9H089 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC23.88■■□□□ 1.41
LSG1Q9H089 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
LSG1Q9H089 HLA-G-202ENST00000376815 851 ntBASIC23.88■■□□□ 1.41
LSG1Q9H089 HLA-G-203ENST00000376818 1127 ntBASIC23.88■■□□□ 1.41
LSG1Q9H089 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
LSG1Q9H089 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
LSG1Q9H089 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC23.88■■□□□ 1.41
LSG1Q9H089 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.88■■□□□ 1.41
LSG1Q9H089 AC091874.3-201ENST00000512672 1195 ntBASIC23.88■■□□□ 1.41
LSG1Q9H089 AC098934.4-201ENST00000564127 592 ntBASIC23.88■■□□□ 1.41
LSG1Q9H089 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC23.88■■□□□ 1.41
LSG1Q9H089 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
LSG1Q9H089 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
LSG1Q9H089 GOLGA2P11-201ENST00000562660 1621 ntBASIC23.88■■□□□ 1.41
LSG1Q9H089 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC23.88■■□□□ 1.41
LSG1Q9H089 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
LSG1Q9H089 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
LSG1Q9H089 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
LSG1Q9H089 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
LSG1Q9H089 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC23.87■■□□□ 1.41
LSG1Q9H089 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC23.87■■□□□ 1.41
LSG1Q9H089 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
LSG1Q9H089 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
LSG1Q9H089 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
LSG1Q9H089 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
LSG1Q9H089 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
LSG1Q9H089 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.87■■□□□ 1.41
LSG1Q9H089 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
LSG1Q9H089 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
LSG1Q9H089 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
LSG1Q9H089 STK25-204ENST00000405585 1643 ntTSL 2 BASIC23.87■■□□□ 1.41
LSG1Q9H089 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC23.87■■□□□ 1.41
LSG1Q9H089 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC23.86■■□□□ 1.41
LSG1Q9H089 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LSG1Q9H089 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
LSG1Q9H089 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC23.86■■□□□ 1.41
LSG1Q9H089 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
LSG1Q9H089 TREX1-205ENST00000625293 1783 ntBASIC23.86■■□□□ 1.41
LSG1Q9H089 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
LSG1Q9H089 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC23.86■■□□□ 1.41
LSG1Q9H089 SERPINH1P1-201ENST00000419794 1249 ntBASIC23.86■■□□□ 1.41
LSG1Q9H089 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.86■■□□□ 1.41
LSG1Q9H089 MYC-209ENST00000641252 345 ntBASIC23.86■■□□□ 1.41
LSG1Q9H089 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
LSG1Q9H089 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
LSG1Q9H089 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC23.86■■□□□ 1.41
LSG1Q9H089 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC23.86■■□□□ 1.41
LSG1Q9H089 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.86■■□□□ 1.41
LSG1Q9H089 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
LSG1Q9H089 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
LSG1Q9H089 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
LSG1Q9H089 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
LSG1Q9H089 MFF-205ENST00000354503 1085 ntTSL 2 BASIC23.85■■□□□ 1.41
LSG1Q9H089 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
LSG1Q9H089 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
LSG1Q9H089 PPP1R14BP2-201ENST00000426284 444 ntBASIC23.85■■□□□ 1.41
LSG1Q9H089 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
LSG1Q9H089 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.85■■□□□ 1.41
LSG1Q9H089 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC23.85■■□□□ 1.41
LSG1Q9H089 BET1L-207ENST00000529614 560 ntTSL 5 BASIC23.85■■□□□ 1.41
LSG1Q9H089 AL138781.1-201ENST00000566567 1274 ntBASIC23.85■■□□□ 1.41
LSG1Q9H089 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC23.85■■□□□ 1.41
LSG1Q9H089 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC23.85■■□□□ 1.41
LSG1Q9H089 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
LSG1Q9H089 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
LSG1Q9H089 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms