Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC39Q96DD0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC39Q96DD0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC39Q96DD0 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC39Q96DD0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
LRRC39Q96DD0 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC39Q96DD0 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.16■□□□□ 0.82
LRRC39Q96DD0 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LRRC39Q96DD0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.16■□□□□ 0.82
LRRC39Q96DD0 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRRC39Q96DD0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LRRC39Q96DD0 MFSD11-216ENST00000590393 1141 ntBASIC20.16■□□□□ 0.82
LRRC39Q96DD0 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.16■□□□□ 0.82
LRRC39Q96DD0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
LRRC39Q96DD0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LRRC39Q96DD0 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LRRC39Q96DD0 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LRRC39Q96DD0 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRRC39Q96DD0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRRC39Q96DD0 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.16■□□□□ 0.82
LRRC39Q96DD0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRRC39Q96DD0 AP001271.2-201ENST00000624018 1556 ntBASIC20.16■□□□□ 0.82
LRRC39Q96DD0 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRRC39Q96DD0 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRRC39Q96DD0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
LRRC39Q96DD0 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.15■□□□□ 0.82
LRRC39Q96DD0 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.15■□□□□ 0.82
LRRC39Q96DD0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
LRRC39Q96DD0 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRRC39Q96DD0 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.15■□□□□ 0.82
LRRC39Q96DD0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRRC39Q96DD0 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRRC39Q96DD0 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRRC39Q96DD0 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
LRRC39Q96DD0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
LRRC39Q96DD0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.15■□□□□ 0.82
LRRC39Q96DD0 AC137761.2-201ENST00000561729 223 ntBASIC20.15■□□□□ 0.82
LRRC39Q96DD0 AC145350.3-201ENST00000569033 163 ntBASIC20.15■□□□□ 0.82
LRRC39Q96DD0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.15■□□□□ 0.82
LRRC39Q96DD0 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.15■□□□□ 0.82
LRRC39Q96DD0 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LRRC39Q96DD0 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.15■□□□□ 0.82
LRRC39Q96DD0 AC068338.2-201ENST00000563278 1430 ntBASIC20.15■□□□□ 0.82
LRRC39Q96DD0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
LRRC39Q96DD0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.15■□□□□ 0.82
LRRC39Q96DD0 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRRC39Q96DD0 AC093484.2-201ENST00000580996 2166 ntBASIC20.15■□□□□ 0.82
LRRC39Q96DD0 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRRC39Q96DD0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC39Q96DD0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC39Q96DD0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.14■□□□□ 0.81
LRRC39Q96DD0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.14■□□□□ 0.81
LRRC39Q96DD0 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC39Q96DD0 KRT18P68-201ENST00000392293 1000 ntBASIC20.14■□□□□ 0.81
LRRC39Q96DD0 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.14■□□□□ 0.81
LRRC39Q96DD0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.14■□□□□ 0.81
LRRC39Q96DD0 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.14■□□□□ 0.81
LRRC39Q96DD0 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
LRRC39Q96DD0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC39Q96DD0 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.14■□□□□ 0.81
LRRC39Q96DD0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.13■□□□□ 0.81
LRRC39Q96DD0 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
LRRC39Q96DD0 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC39Q96DD0 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC39Q96DD0 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC39Q96DD0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
LRRC39Q96DD0 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC39Q96DD0 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC39Q96DD0 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
LRRC39Q96DD0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC39Q96DD0 CNN2P6-201ENST00000439038 900 ntBASIC20.13■□□□□ 0.81
LRRC39Q96DD0 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC39Q96DD0 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC39Q96DD0 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
LRRC39Q96DD0 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC39Q96DD0 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC39Q96DD0 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.13■□□□□ 0.81
LRRC39Q96DD0 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC39Q96DD0 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.13■□□□□ 0.81
LRRC39Q96DD0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC39Q96DD0 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.13■□□□□ 0.81
LRRC39Q96DD0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC39Q96DD0 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC39Q96DD0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
LRRC39Q96DD0 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC39Q96DD0 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC39Q96DD0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC39Q96DD0 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC39Q96DD0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC39Q96DD0 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.12■□□□□ 0.81
LRRC39Q96DD0 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.12■□□□□ 0.81
LRRC39Q96DD0 DUX4L16-201ENST00000555130 1264 ntBASIC20.12■□□□□ 0.81
LRRC39Q96DD0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.12■□□□□ 0.81
LRRC39Q96DD0 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.12■□□□□ 0.81
LRRC39Q96DD0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.12■□□□□ 0.81
LRRC39Q96DD0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.12■□□□□ 0.81
LRRC39Q96DD0 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC39Q96DD0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC39Q96DD0 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC39Q96DD0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms