Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HDAC11Q96DB2 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
HDAC11Q96DB2 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.56■□□□□ 0.88
HDAC11Q96DB2 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HDAC11Q96DB2 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
HDAC11Q96DB2 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HDAC11Q96DB2 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HDAC11Q96DB2 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HDAC11Q96DB2 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.56■□□□□ 0.88
HDAC11Q96DB2 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HDAC11Q96DB2 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
HDAC11Q96DB2 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HDAC11Q96DB2 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
HDAC11Q96DB2 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.55■□□□□ 0.88
HDAC11Q96DB2 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HDAC11Q96DB2 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.55■□□□□ 0.88
HDAC11Q96DB2 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.55■□□□□ 0.88
HDAC11Q96DB2 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HDAC11Q96DB2 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HDAC11Q96DB2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HDAC11Q96DB2 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
HDAC11Q96DB2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HDAC11Q96DB2 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.55■□□□□ 0.88
HDAC11Q96DB2 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.55■□□□□ 0.88
HDAC11Q96DB2 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.55■□□□□ 0.88
HDAC11Q96DB2 AL031963.3-201ENST00000606441 850 ntBASIC20.55■□□□□ 0.88
HDAC11Q96DB2 AC092118.2-201ENST00000613495 667 ntBASIC20.55■□□□□ 0.88
HDAC11Q96DB2 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
HDAC11Q96DB2 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HDAC11Q96DB2 AC138932.1-201ENST00000534164 6830 ntBASIC20.55■□□□□ 0.88
HDAC11Q96DB2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.55■□□□□ 0.88
HDAC11Q96DB2 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HDAC11Q96DB2 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HDAC11Q96DB2 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HDAC11Q96DB2 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
HDAC11Q96DB2 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HDAC11Q96DB2 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HDAC11Q96DB2 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HDAC11Q96DB2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
HDAC11Q96DB2 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.54■□□□□ 0.88
HDAC11Q96DB2 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HDAC11Q96DB2 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
HDAC11Q96DB2 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HDAC11Q96DB2 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HDAC11Q96DB2 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HDAC11Q96DB2 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HDAC11Q96DB2 SLC29A4P1-201ENST00000398760 971 ntBASIC20.54■□□□□ 0.88
HDAC11Q96DB2 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.54■□□□□ 0.88
HDAC11Q96DB2 AC090192.1-201ENST00000517740 490 ntBASIC20.54■□□□□ 0.88
HDAC11Q96DB2 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.54■□□□□ 0.88
HDAC11Q96DB2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
HDAC11Q96DB2 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
HDAC11Q96DB2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
HDAC11Q96DB2 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
HDAC11Q96DB2 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
HDAC11Q96DB2 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HDAC11Q96DB2 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.54■□□□□ 0.88
HDAC11Q96DB2 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HDAC11Q96DB2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.54■□□□□ 0.88
HDAC11Q96DB2 KRT8P17-201ENST00000453110 1448 ntBASIC20.53■□□□□ 0.88
HDAC11Q96DB2 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HDAC11Q96DB2 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HDAC11Q96DB2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.53■□□□□ 0.88
HDAC11Q96DB2 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
HDAC11Q96DB2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.53■□□□□ 0.88
HDAC11Q96DB2 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
HDAC11Q96DB2 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.53■□□□□ 0.88
HDAC11Q96DB2 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HDAC11Q96DB2 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.53■□□□□ 0.88
HDAC11Q96DB2 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
HDAC11Q96DB2 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HDAC11Q96DB2 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HDAC11Q96DB2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.53■□□□□ 0.88
HDAC11Q96DB2 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HDAC11Q96DB2 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HDAC11Q96DB2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HDAC11Q96DB2 KRT8P20-201ENST00000423953 1409 ntBASIC20.53■□□□□ 0.88
HDAC11Q96DB2 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
HDAC11Q96DB2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.52■□□□□ 0.88
HDAC11Q96DB2 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
HDAC11Q96DB2 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HDAC11Q96DB2 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HDAC11Q96DB2 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
HDAC11Q96DB2 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.52■□□□□ 0.88
HDAC11Q96DB2 AC023632.3-201ENST00000521633 145 ntBASIC20.52■□□□□ 0.88
HDAC11Q96DB2 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.52■□□□□ 0.88
HDAC11Q96DB2 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.52■□□□□ 0.88
HDAC11Q96DB2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.52■□□□□ 0.88
HDAC11Q96DB2 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.52■□□□□ 0.88
HDAC11Q96DB2 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HDAC11Q96DB2 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HDAC11Q96DB2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.52■□□□□ 0.88
HDAC11Q96DB2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HDAC11Q96DB2 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
HDAC11Q96DB2 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
HDAC11Q96DB2 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
HDAC11Q96DB2 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
HDAC11Q96DB2 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
HDAC11Q96DB2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
HDAC11Q96DB2 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms