Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LSMEM1Q8N8F7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.29■□□□□ 0.52
LSMEM1Q8N8F7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LSMEM1Q8N8F7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.29■□□□□ 0.52
LSMEM1Q8N8F7 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LSMEM1Q8N8F7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LSMEM1Q8N8F7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
LSMEM1Q8N8F7 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
LSMEM1Q8N8F7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LSMEM1Q8N8F7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LSMEM1Q8N8F7 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.28■□□□□ 0.52
LSMEM1Q8N8F7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSMEM1Q8N8F7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSMEM1Q8N8F7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSMEM1Q8N8F7 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LSMEM1Q8N8F7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSMEM1Q8N8F7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSMEM1Q8N8F7 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSMEM1Q8N8F7 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSMEM1Q8N8F7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSMEM1Q8N8F7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSMEM1Q8N8F7 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSMEM1Q8N8F7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.28■□□□□ 0.52
LSMEM1Q8N8F7 AC004911.1-201ENST00000416316 871 ntBASIC18.28■□□□□ 0.52
LSMEM1Q8N8F7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.28■□□□□ 0.52
LSMEM1Q8N8F7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.28■□□□□ 0.52
LSMEM1Q8N8F7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.28■□□□□ 0.52
LSMEM1Q8N8F7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.28■□□□□ 0.52
LSMEM1Q8N8F7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.28■□□□□ 0.52
LSMEM1Q8N8F7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.28■□□□□ 0.52
LSMEM1Q8N8F7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSMEM1Q8N8F7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.28■□□□□ 0.52
LSMEM1Q8N8F7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.28■□□□□ 0.52
LSMEM1Q8N8F7 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSMEM1Q8N8F7 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LSMEM1Q8N8F7 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LSMEM1Q8N8F7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
LSMEM1Q8N8F7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LSMEM1Q8N8F7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.28■□□□□ 0.52
LSMEM1Q8N8F7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSMEM1Q8N8F7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
LSMEM1Q8N8F7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.27■□□□□ 0.52
LSMEM1Q8N8F7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LSMEM1Q8N8F7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.27■□□□□ 0.52
LSMEM1Q8N8F7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LSMEM1Q8N8F7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LSMEM1Q8N8F7 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.27■□□□□ 0.52
LSMEM1Q8N8F7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
LSMEM1Q8N8F7 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LSMEM1Q8N8F7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
LSMEM1Q8N8F7 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
LSMEM1Q8N8F7 AL355472.2-201ENST00000422958 438 ntBASIC18.27■□□□□ 0.52
LSMEM1Q8N8F7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.27■□□□□ 0.52
LSMEM1Q8N8F7 AL031963.3-201ENST00000606441 850 ntBASIC18.27■□□□□ 0.52
LSMEM1Q8N8F7 AC080038.1-201ENST00000611274 1154 ntBASIC18.27■□□□□ 0.52
LSMEM1Q8N8F7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LSMEM1Q8N8F7 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
LSMEM1Q8N8F7 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
LSMEM1Q8N8F7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LSMEM1Q8N8F7 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
LSMEM1Q8N8F7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LSMEM1Q8N8F7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
LSMEM1Q8N8F7 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
LSMEM1Q8N8F7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LSMEM1Q8N8F7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.26■□□□□ 0.51
LSMEM1Q8N8F7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LSMEM1Q8N8F7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.26■□□□□ 0.51
LSMEM1Q8N8F7 KRT8P20-201ENST00000423953 1409 ntBASIC18.26■□□□□ 0.51
LSMEM1Q8N8F7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LSMEM1Q8N8F7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LSMEM1Q8N8F7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LSMEM1Q8N8F7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.26■□□□□ 0.51
LSMEM1Q8N8F7 AC093787.1-201ENST00000450396 207 ntBASIC18.26■□□□□ 0.51
LSMEM1Q8N8F7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.26■□□□□ 0.51
LSMEM1Q8N8F7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.26■□□□□ 0.51
LSMEM1Q8N8F7 AC073111.5-205ENST00000641717 521 ntBASIC18.26■□□□□ 0.51
LSMEM1Q8N8F7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LSMEM1Q8N8F7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LSMEM1Q8N8F7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LSMEM1Q8N8F7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.26■□□□□ 0.51
LSMEM1Q8N8F7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.26■□□□□ 0.51
LSMEM1Q8N8F7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LSMEM1Q8N8F7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.25■□□□□ 0.51
LSMEM1Q8N8F7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSMEM1Q8N8F7 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSMEM1Q8N8F7 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSMEM1Q8N8F7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSMEM1Q8N8F7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSMEM1Q8N8F7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSMEM1Q8N8F7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSMEM1Q8N8F7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LSMEM1Q8N8F7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LSMEM1Q8N8F7 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSMEM1Q8N8F7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSMEM1Q8N8F7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LSMEM1Q8N8F7 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSMEM1Q8N8F7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSMEM1Q8N8F7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LSMEM1Q8N8F7 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.25■□□□□ 0.51
LSMEM1Q8N8F7 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms