Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC27.88■■■□□ 2.05
ARHGEF28Q8N1W1 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
ARHGEF28Q8N1W1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
ARHGEF28Q8N1W1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC27.88■■■□□ 2.05
ARHGEF28Q8N1W1 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
ARHGEF28Q8N1W1 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC27.88■■■□□ 2.05
ARHGEF28Q8N1W1 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC27.88■■■□□ 2.05
ARHGEF28Q8N1W1 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC27.88■■■□□ 2.05
ARHGEF28Q8N1W1 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
ARHGEF28Q8N1W1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC27.88■■■□□ 2.05
ARHGEF28Q8N1W1 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC27.88■■■□□ 2.05
ARHGEF28Q8N1W1 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
ARHGEF28Q8N1W1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC27.88■■■□□ 2.05
ARHGEF28Q8N1W1 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC27.87■■■□□ 2.05
ARHGEF28Q8N1W1 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC27.87■■■□□ 2.05
ARHGEF28Q8N1W1 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
ARHGEF28Q8N1W1 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC27.87■■■□□ 2.05
ARHGEF28Q8N1W1 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
ARHGEF28Q8N1W1 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
ARHGEF28Q8N1W1 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC27.87■■■□□ 2.05
ARHGEF28Q8N1W1 AC116562.2-201ENST00000507042 360 ntBASIC27.87■■■□□ 2.05
ARHGEF28Q8N1W1 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
ARHGEF28Q8N1W1 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC27.87■■■□□ 2.05
ARHGEF28Q8N1W1 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC27.87■■■□□ 2.05
ARHGEF28Q8N1W1 AC116351.2-201ENST00000606540 1585 ntBASIC27.86■■■□□ 2.05
ARHGEF28Q8N1W1 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC27.86■■■□□ 2.05
ARHGEF28Q8N1W1 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC27.86■■■□□ 2.05
ARHGEF28Q8N1W1 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC27.86■■■□□ 2.05
ARHGEF28Q8N1W1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC27.86■■■□□ 2.05
ARHGEF28Q8N1W1 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
ARHGEF28Q8N1W1 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC27.86■■■□□ 2.05
ARHGEF28Q8N1W1 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
ARHGEF28Q8N1W1 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
ARHGEF28Q8N1W1 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC27.86■■■□□ 2.05
ARHGEF28Q8N1W1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
ARHGEF28Q8N1W1 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
ARHGEF28Q8N1W1 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
ARHGEF28Q8N1W1 KSR1P1-201ENST00000446298 240 ntBASIC27.85■■■□□ 2.05
ARHGEF28Q8N1W1 AP002982.1-201ENST00000492365 877 ntBASIC27.85■■■□□ 2.05
ARHGEF28Q8N1W1 AC026271.3-201ENST00000571884 352 ntBASIC27.85■■■□□ 2.05
ARHGEF28Q8N1W1 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC27.85■■■□□ 2.05
ARHGEF28Q8N1W1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
ARHGEF28Q8N1W1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
ARHGEF28Q8N1W1 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
ARHGEF28Q8N1W1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC27.84■■■□□ 2.05
ARHGEF28Q8N1W1 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC27.84■■■□□ 2.05
ARHGEF28Q8N1W1 KRT18P21-201ENST00000515767 1272 ntBASIC27.84■■■□□ 2.05
ARHGEF28Q8N1W1 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
ARHGEF28Q8N1W1 AP000525.1-201ENST00000608286 694 ntBASIC27.84■■■□□ 2.05
ARHGEF28Q8N1W1 AC010331.1-201ENST00000611423 582 ntBASIC27.84■■■□□ 2.05
ARHGEF28Q8N1W1 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC27.84■■■□□ 2.05
ARHGEF28Q8N1W1 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC27.84■■■□□ 2.05
ARHGEF28Q8N1W1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
ARHGEF28Q8N1W1 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC27.84■■■□□ 2.05
ARHGEF28Q8N1W1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC27.84■■■□□ 2.05
ARHGEF28Q8N1W1 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
ARHGEF28Q8N1W1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC27.84■■■□□ 2.05
ARHGEF28Q8N1W1 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
ARHGEF28Q8N1W1 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
ARHGEF28Q8N1W1 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC27.84■■■□□ 2.05
ARHGEF28Q8N1W1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
ARHGEF28Q8N1W1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC27.83■■■□□ 2.05
ARHGEF28Q8N1W1 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
ARHGEF28Q8N1W1 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC27.83■■■□□ 2.05
ARHGEF28Q8N1W1 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
ARHGEF28Q8N1W1 UNC93B2-201ENST00000285383 730 ntBASIC27.83■■■□□ 2.05
ARHGEF28Q8N1W1 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
ARHGEF28Q8N1W1 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
ARHGEF28Q8N1W1 AL355355.2-201ENST00000442321 338 ntBASIC27.83■■■□□ 2.05
ARHGEF28Q8N1W1 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC27.83■■■□□ 2.05
ARHGEF28Q8N1W1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC27.83■■■□□ 2.05
ARHGEF28Q8N1W1 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC27.83■■■□□ 2.05
ARHGEF28Q8N1W1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
ARHGEF28Q8N1W1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC27.82■■■□□ 2.04
ARHGEF28Q8N1W1 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
ARHGEF28Q8N1W1 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC27.82■■■□□ 2.04
ARHGEF28Q8N1W1 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
ARHGEF28Q8N1W1 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
ARHGEF28Q8N1W1 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC27.82■■■□□ 2.04
ARHGEF28Q8N1W1 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC27.82■■■□□ 2.04
ARHGEF28Q8N1W1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
ARHGEF28Q8N1W1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
ARHGEF28Q8N1W1 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC27.81■■■□□ 2.04
ARHGEF28Q8N1W1 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC27.81■■■□□ 2.04
ARHGEF28Q8N1W1 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC27.81■■■□□ 2.04
ARHGEF28Q8N1W1 ABBA01031674.1-201ENST00000635145 728 ntBASIC27.81■■■□□ 2.04
ARHGEF28Q8N1W1 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
ARHGEF28Q8N1W1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
ARHGEF28Q8N1W1 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC27.81■■■□□ 2.04
ARHGEF28Q8N1W1 PHGDH-210ENST00000641115 1638 ntBASIC27.81■■■□□ 2.04
ARHGEF28Q8N1W1 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC27.81■■■□□ 2.04
ARHGEF28Q8N1W1 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC27.81■■■□□ 2.04
ARHGEF28Q8N1W1 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
ARHGEF28Q8N1W1 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
ARHGEF28Q8N1W1 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC27.8■■■□□ 2.04
ARHGEF28Q8N1W1 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
ARHGEF28Q8N1W1 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC27.8■■■□□ 2.04
ARHGEF28Q8N1W1 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC27.8■■■□□ 2.04
ARHGEF28Q8N1W1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC27.8■■■□□ 2.04
ARHGEF28Q8N1W1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC27.8■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms