Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
RAI1Q7Z5J4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.12■□□□□ 0.33
RAI1Q7Z5J4 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.12■□□□□ 0.33
RAI1Q7Z5J4 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAI1Q7Z5J4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.12■□□□□ 0.33
RAI1Q7Z5J4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.12■□□□□ 0.33
RAI1Q7Z5J4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.12■□□□□ 0.33
RAI1Q7Z5J4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAI1Q7Z5J4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAI1Q7Z5J4 MIR6786-201ENST00000616843 113 ntBASIC17.12■□□□□ 0.33
RAI1Q7Z5J4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAI1Q7Z5J4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAI1Q7Z5J4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAI1Q7Z5J4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAI1Q7Z5J4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAI1Q7Z5J4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAI1Q7Z5J4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAI1Q7Z5J4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAI1Q7Z5J4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAI1Q7Z5J4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAI1Q7Z5J4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAI1Q7Z5J4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAI1Q7Z5J4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.11■□□□□ 0.33
RAI1Q7Z5J4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.11■□□□□ 0.33
RAI1Q7Z5J4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.11■□□□□ 0.33
RAI1Q7Z5J4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.11■□□□□ 0.33
RAI1Q7Z5J4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.11■□□□□ 0.33
RAI1Q7Z5J4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.11■□□□□ 0.33
RAI1Q7Z5J4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAI1Q7Z5J4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RAI1Q7Z5J4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAI1Q7Z5J4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RAI1Q7Z5J4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.11■□□□□ 0.33
RAI1Q7Z5J4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAI1Q7Z5J4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAI1Q7Z5J4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAI1Q7Z5J4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAI1Q7Z5J4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAI1Q7Z5J4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAI1Q7Z5J4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.11■□□□□ 0.33
RAI1Q7Z5J4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.11■□□□□ 0.33
RAI1Q7Z5J4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAI1Q7Z5J4 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.11■□□□□ 0.33
RAI1Q7Z5J4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.11■□□□□ 0.33
RAI1Q7Z5J4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAI1Q7Z5J4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAI1Q7Z5J4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAI1Q7Z5J4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RAI1Q7Z5J4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAI1Q7Z5J4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
RAI1Q7Z5J4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RAI1Q7Z5J4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.1■□□□□ 0.33
RAI1Q7Z5J4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAI1Q7Z5J4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.1■□□□□ 0.33
RAI1Q7Z5J4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.1■□□□□ 0.33
RAI1Q7Z5J4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.1■□□□□ 0.33
RAI1Q7Z5J4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.1■□□□□ 0.33
RAI1Q7Z5J4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAI1Q7Z5J4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAI1Q7Z5J4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.1■□□□□ 0.33
RAI1Q7Z5J4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.1■□□□□ 0.33
RAI1Q7Z5J4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAI1Q7Z5J4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAI1Q7Z5J4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAI1Q7Z5J4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAI1Q7Z5J4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAI1Q7Z5J4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAI1Q7Z5J4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.1■□□□□ 0.33
RAI1Q7Z5J4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.1■□□□□ 0.33
RAI1Q7Z5J4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RAI1Q7Z5J4 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.09■□□□□ 0.33
RAI1Q7Z5J4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.09■□□□□ 0.33
RAI1Q7Z5J4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAI1Q7Z5J4 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.09■□□□□ 0.33
RAI1Q7Z5J4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.09■□□□□ 0.33
RAI1Q7Z5J4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.09■□□□□ 0.33
RAI1Q7Z5J4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RAI1Q7Z5J4 AL445228.2-201ENST00000605589 952 ntBASIC17.09■□□□□ 0.33
RAI1Q7Z5J4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.09■□□□□ 0.33
RAI1Q7Z5J4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAI1Q7Z5J4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAI1Q7Z5J4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAI1Q7Z5J4 HTR7P1-201ENST00000538670 1336 ntBASIC17.09■□□□□ 0.33
RAI1Q7Z5J4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RAI1Q7Z5J4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RAI1Q7Z5J4 FP700111.2-201ENST00000619190 1892 ntBASIC17.09■□□□□ 0.33
RAI1Q7Z5J4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAI1Q7Z5J4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAI1Q7Z5J4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RAI1Q7Z5J4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAI1Q7Z5J4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RAI1Q7Z5J4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAI1Q7Z5J4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAI1Q7Z5J4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAI1Q7Z5J4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
RAI1Q7Z5J4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAI1Q7Z5J4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAI1Q7Z5J4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.09■□□□□ 0.33
RAI1Q7Z5J4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RAI1Q7Z5J4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms