Protein–RNA interactions for Protein: Q08387

DNL4, DNA ligase 4, yeastyeast

Predicted RBP Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DNL4Q08387 YOR161W-AYOR161W-A 81 nt0.81□□□□□ -2.28
DNL4Q08387 ASE1YOR058C 2658 nt0.81□□□□□ -2.28
DNL4Q08387 YGL123C-AYGL123C-A 231 nt0.8□□□□□ -2.28
DNL4Q08387 RPL26BYGR034W 384 nt0.8□□□□□ -2.28
DNL4Q08387 APQ12YIL040W 417 nt0.8□□□□□ -2.28
DNL4Q08387 RKR1YMR247C 4689 nt0.79□□□□□ -2.28
DNL4Q08387 YDR406W-AYDR406W-A 246 nt0.78□□□□□ -2.28
DNL4Q08387 YEL014CYEL014C 306 nt0.78□□□□□ -2.28
DNL4Q08387 YLR282CYLR282C 342 nt0.78□□□□□ -2.28
DNL4Q08387 YNL097C-BYNL097C-B 123 nt0.78□□□□□ -2.28
DNL4Q08387 snR190snR190 190 nt0.78□□□□□ -2.28
DNL4Q08387 YER053C-AYER053C-A 114 nt0.77□□□□□ -2.29
DNL4Q08387 tT(AGU)BtT(AGU)B 73 nt0.77□□□□□ -2.29
DNL4Q08387 tT(AGU)CtT(AGU)C 73 nt0.77□□□□□ -2.29
DNL4Q08387 tT(AGU)DtT(AGU)D 73 nt0.77□□□□□ -2.29
DNL4Q08387 tT(AGU)HtT(AGU)H 73 nt0.77□□□□□ -2.29
DNL4Q08387 tT(AGU)I1tT(AGU)I1 73 nt0.77□□□□□ -2.29
DNL4Q08387 tT(AGU)I2tT(AGU)I2 73 nt0.77□□□□□ -2.29
DNL4Q08387 tT(AGU)JtT(AGU)J 73 nt0.77□□□□□ -2.29
DNL4Q08387 tT(AGU)N1tT(AGU)N1 73 nt0.77□□□□□ -2.29
DNL4Q08387 tT(AGU)N2tT(AGU)N2 73 nt0.77□□□□□ -2.29
DNL4Q08387 tT(AGU)O1tT(AGU)O1 73 nt0.77□□□□□ -2.29
DNL4Q08387 tT(AGU)O2tT(AGU)O2 73 nt0.77□□□□□ -2.29
DNL4Q08387 YMR046W-AYMR046W-A 129 nt0.77□□□□□ -2.29
DNL4Q08387 YKL145W-AYKL145W-A 93 nt0.76□□□□□ -2.29
DNL4Q08387 tM(CAU)Q1tM(CAU)Q1 76 nt0.75□□□□□ -2.29
DNL4Q08387 snR52snR52 92 nt0.75□□□□□ -2.29
DNL4Q08387 SEC1YDR164C 2175 nt0.74□□□□□ -2.29
DNL4Q08387 PMP1YCR024C-A 123 nt0.74□□□□□ -2.29
DNL4Q08387 MYO1YHR023W 5787 nt0.73□□□□□ -2.29
DNL4Q08387 YIL002W-AYIL002W-A 210 nt0.73□□□□□ -2.29
DNL4Q08387 YML002WYML002W 2214 nt0.72□□□□□ -2.29
DNL4Q08387 FYV10YIL097W 1551 nt0.72□□□□□ -2.29
DNL4Q08387 COX5BYIL111W 456 nt0.72□□□□□ -2.29
DNL4Q08387 YJL182CYJL182C 318 nt0.71□□□□□ -2.3
DNL4Q08387 YKL100W-AYKL100W-A 90 nt0.71□□□□□ -2.3
DNL4Q08387 SEC8YPR055W 3198 nt0.7□□□□□ -2.3
DNL4Q08387 HAL9YOL089C 3093 nt0.7□□□□□ -2.3
DNL4Q08387 tN(GUU)QtN(GUU)Q 71 nt0.69□□□□□ -2.3
DNL4Q08387 YMR272W-AYMR272W-A 114 nt0.69□□□□□ -2.3
DNL4Q08387 YPR160W-AYPR160W-A 81 nt0.69□□□□□ -2.3
DNL4Q08387 UTP8YGR128C 2142 nt0.68□□□□□ -2.3
DNL4Q08387 PRP42YDR235W 1635 nt0.68□□□□□ -2.3
DNL4Q08387 YNL198CYNL198C 303 nt0.68□□□□□ -2.3
DNL4Q08387 CHS6YJL099W 2241 nt0.67□□□□□ -2.3
DNL4Q08387 YJL150WYJL150W 303 nt0.67□□□□□ -2.3
DNL4Q08387 snR46snR46 197 nt0.67□□□□□ -2.3
DNL4Q08387 BIR1YJR089W 2865 nt0.66□□□□□ -2.3
DNL4Q08387 YLR399W-AYLR399W-A 105 nt0.66□□□□□ -2.3
DNL4Q08387 PRP5YBR237W 2550 nt0.65□□□□□ -2.3
DNL4Q08387 YLR342W-AYLR342W-A 174 nt0.65□□□□□ -2.31
DNL4Q08387 YPR159C-AYPR159C-A 102 nt0.65□□□□□ -2.31
DNL4Q08387 PRP39YML046W 1890 nt0.65□□□□□ -2.31
DNL4Q08387 ULP2YIL031W 3105 nt0.64□□□□□ -2.31
DNL4Q08387 YLR041WYLR041W 321 nt0.64□□□□□ -2.31
DNL4Q08387 YEL073CYEL073C 324 nt0.63□□□□□ -2.31
DNL4Q08387 YNL337WYNL337W 255 nt0.62□□□□□ -2.31
DNL4Q08387 TRS65YGR166W 1683 nt0.62□□□□□ -2.31
DNL4Q08387 TAH1YCR060W 336 nt0.61□□□□□ -2.31
DNL4Q08387 OST4YDL232W 111 nt0.61□□□□□ -2.31
DNL4Q08387 YDR544CYDR544C 429 nt0.61□□□□□ -2.31
DNL4Q08387 LTE1YAL024C 4308 nt0.6□□□□□ -2.31
DNL4Q08387 YOR192C-BYOR192C-B 5313 nt0.6□□□□□ -2.31
DNL4Q08387 AI1Q0050 2505 nt0.6□□□□□ -2.31
DNL4Q08387 YHR131W-AYHR131W-A 246 nt0.6□□□□□ -2.31
DNL4Q08387 YLR466C-BYLR466C-B 117 nt0.6□□□□□ -2.31
DNL4Q08387 SNU13YEL026W 381 nt0.59□□□□□ -2.31
DNL4Q08387 YLR232WYLR232W 348 nt0.59□□□□□ -2.31
DNL4Q08387 YBL039C-AYBL039C-A 84 nt0.59□□□□□ -2.31
DNL4Q08387 FMP27YLR454W 7887 nt0.59□□□□□ -2.32
DNL4Q08387 BEM3YPL115C 3387 nt0.59□□□□□ -2.32
DNL4Q08387 UTP10YJL109C 5310 nt0.58□□□□□ -2.32
DNL4Q08387 YGL182CYGL182C 324 nt0.58□□□□□ -2.32
DNL4Q08387 YJL127W-AYJL127W-A 117 nt0.58□□□□□ -2.32
DNL4Q08387 YGR151CYGR151C 336 nt0.57□□□□□ -2.32
DNL4Q08387 YOR381W-AYOR381W-A 168 nt0.57□□□□□ -2.32
DNL4Q08387 YNL338WYNL338W 159 nt0.54□□□□□ -2.32
DNL4Q08387 YSP1YHR155W 3687 nt0.52□□□□□ -2.33
DNL4Q08387 NNF2YGR089W 2811 nt0.52□□□□□ -2.33
DNL4Q08387 YLL006W-AYLL006W-A 177 nt0.51□□□□□ -2.33
DNL4Q08387 PET111YMR257C 2403 nt0.51□□□□□ -2.33
DNL4Q08387 YBR072C-AYBR072C-A 162 nt0.51□□□□□ -2.33
DNL4Q08387 IQG1YPL242C 4488 nt0.5□□□□□ -2.33
DNL4Q08387 SDH6YDR379C-A 240 nt0.49□□□□□ -2.33
DNL4Q08387 YGL007C-AYGL007C-A 87 nt0.48□□□□□ -2.33
DNL4Q08387 YHL015W-AYHL015W-A 84 nt0.48□□□□□ -2.33
DNL4Q08387 YBL053WYBL053W 375 nt0.48□□□□□ -2.33
DNL4Q08387 YOR170WYOR170W 306 nt0.48□□□□□ -2.33
DNL4Q08387 COG6YNL041C 2520 nt0.48□□□□□ -2.33
DNL4Q08387 YOR329W-AYOR329W-A 210 nt0.47□□□□□ -2.33
DNL4Q08387 Q0032Q0032 291 nt0.46□□□□□ -2.34
DNL4Q08387 YDR371C-AYDR371C-A 105 nt0.46□□□□□ -2.34
DNL4Q08387 RPS26AYGL189C 360 nt0.46□□□□□ -2.34
DNL4Q08387 YOR102WYOR102W 351 nt0.46□□□□□ -2.34
DNL4Q08387 YOR314W-AYOR314W-A 111 nt0.45□□□□□ -2.34
DNL4Q08387 ORC3YLL004W 1851 nt0.44□□□□□ -2.34
DNL4Q08387 YDR210WYDR210W 228 nt0.44□□□□□ -2.34
DNL4Q08387 tM(CAU)Q2tM(CAU)Q2 78 nt0.44□□□□□ -2.34
DNL4Q08387 snR48snR48 113 nt0.44□□□□□ -2.34
DNL4Q08387 NIP1YMR309C 2439 nt0.44□□□□□ -2.34
Retrieved 100 of 7,029 protein–RNA pairs in 12.9 ms