Protein–RNA interactions for Protein: Q08273

HRT1, RING-box protein HRT1, yeastyeast

Predictions only

Length 121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRT1Q08273 YIL002W-AYIL002W-A 210 nt0.62□□□□□ -2.31
HRT1Q08273 YIL142C-AYIL142C-A 333 nt0.62□□□□□ -2.31
HRT1Q08273 UTP8YGR128C 2142 nt0.62□□□□□ -2.31
HRT1Q08273 FYV10YIL097W 1551 nt0.62□□□□□ -2.31
HRT1Q08273 COX5BYIL111W 456 nt0.61□□□□□ -2.31
HRT1Q08273 YJL150WYJL150W 303 nt0.61□□□□□ -2.31
HRT1Q08273 tT(AGU)BtT(AGU)B 73 nt0.6□□□□□ -2.31
HRT1Q08273 tT(AGU)CtT(AGU)C 73 nt0.6□□□□□ -2.31
HRT1Q08273 tT(AGU)DtT(AGU)D 73 nt0.6□□□□□ -2.31
HRT1Q08273 tT(AGU)HtT(AGU)H 73 nt0.6□□□□□ -2.31
HRT1Q08273 tT(AGU)I1tT(AGU)I1 73 nt0.6□□□□□ -2.31
HRT1Q08273 tT(AGU)I2tT(AGU)I2 73 nt0.6□□□□□ -2.31
HRT1Q08273 tT(AGU)JtT(AGU)J 73 nt0.6□□□□□ -2.31
HRT1Q08273 tT(AGU)N1tT(AGU)N1 73 nt0.6□□□□□ -2.31
HRT1Q08273 tT(AGU)N2tT(AGU)N2 73 nt0.6□□□□□ -2.31
HRT1Q08273 tT(AGU)O1tT(AGU)O1 73 nt0.6□□□□□ -2.31
HRT1Q08273 tT(AGU)O2tT(AGU)O2 73 nt0.6□□□□□ -2.31
HRT1Q08273 YKL100W-AYKL100W-A 90 nt0.6□□□□□ -2.31
HRT1Q08273 YPR117WYPR117W 7470 nt0.59□□□□□ -2.31
HRT1Q08273 YLR342W-AYLR342W-A 174 nt0.59□□□□□ -2.31
HRT1Q08273 YNL337WYNL337W 255 nt0.59□□□□□ -2.31
HRT1Q08273 snR46snR46 197 nt0.59□□□□□ -2.31
HRT1Q08273 PRP42YDR235W 1635 nt0.59□□□□□ -2.32
HRT1Q08273 PRP5YBR237W 2550 nt0.58□□□□□ -2.32
HRT1Q08273 KAP120YPL125W 3099 nt0.58□□□□□ -2.32
HRT1Q08273 tN(GUU)QtN(GUU)Q 71 nt0.58□□□□□ -2.32
HRT1Q08273 SEC8YPR055W 3198 nt0.58□□□□□ -2.32
HRT1Q08273 YLR466C-BYLR466C-B 117 nt0.57□□□□□ -2.32
HRT1Q08273 YMR272W-AYMR272W-A 114 nt0.57□□□□□ -2.32
HRT1Q08273 YPR159C-AYPR159C-A 102 nt0.57□□□□□ -2.32
HRT1Q08273 YPR160W-AYPR160W-A 81 nt0.57□□□□□ -2.32
HRT1Q08273 HAL9YOL089C 3093 nt0.56□□□□□ -2.32
HRT1Q08273 YEL073CYEL073C 324 nt0.56□□□□□ -2.32
HRT1Q08273 YGR151CYGR151C 336 nt0.56□□□□□ -2.32
HRT1Q08273 CHS6YJL099W 2241 nt0.55□□□□□ -2.32
HRT1Q08273 YDR544CYDR544C 429 nt0.55□□□□□ -2.32
HRT1Q08273 PRP39YML046W 1890 nt0.54□□□□□ -2.32
HRT1Q08273 BEM3YPL115C 3387 nt0.54□□□□□ -2.32
HRT1Q08273 TAH1YCR060W 336 nt0.54□□□□□ -2.32
HRT1Q08273 YDL073WYDL073W 2955 nt0.54□□□□□ -2.32
HRT1Q08273 YLR399W-AYLR399W-A 105 nt0.54□□□□□ -2.32
HRT1Q08273 TRS65YGR166W 1683 nt0.53□□□□□ -2.32
HRT1Q08273 STF2YGR008C 255 nt0.53□□□□□ -2.32
HRT1Q08273 YNL338WYNL338W 159 nt0.53□□□□□ -2.32
HRT1Q08273 YLR041WYLR041W 321 nt0.52□□□□□ -2.33
HRT1Q08273 YLR232WYLR232W 348 nt0.52□□□□□ -2.33
HRT1Q08273 UBP3YER151C 2739 nt0.52□□□□□ -2.33
HRT1Q08273 YOR192C-BYOR192C-B 5313 nt0.51□□□□□ -2.33
HRT1Q08273 SNU13YEL026W 381 nt0.51□□□□□ -2.33
HRT1Q08273 YGL182CYGL182C 324 nt0.51□□□□□ -2.33
HRT1Q08273 YHR131W-AYHR131W-A 246 nt0.51□□□□□ -2.33
HRT1Q08273 YBL039C-AYBL039C-A 84 nt0.51□□□□□ -2.33
HRT1Q08273 OST4YDL232W 111 nt0.5□□□□□ -2.33
HRT1Q08273 HUG1YML058W-A 207 nt0.5□□□□□ -2.33
HRT1Q08273 YJL127W-AYJL127W-A 117 nt0.49□□□□□ -2.33
HRT1Q08273 YOR381W-AYOR381W-A 168 nt0.49□□□□□ -2.33
HRT1Q08273 YHL015W-AYHL015W-A 84 nt0.47□□□□□ -2.33
HRT1Q08273 YBL053WYBL053W 375 nt0.47□□□□□ -2.33
HRT1Q08273 UTP10YJL109C 5310 nt0.46□□□□□ -2.34
HRT1Q08273 YGL007C-AYGL007C-A 87 nt0.46□□□□□ -2.34
HRT1Q08273 CLU1YMR012W 3834 nt0.46□□□□□ -2.34
HRT1Q08273 YMR160WYMR160W 2451 nt0.46□□□□□ -2.34
HRT1Q08273 YBR072C-AYBR072C-A 162 nt0.45□□□□□ -2.34
HRT1Q08273 NNF2YGR089W 2811 nt0.44□□□□□ -2.34
HRT1Q08273 Q0032Q0032 291 nt0.44□□□□□ -2.34
HRT1Q08273 YOR102WYOR102W 351 nt0.44□□□□□ -2.34
HRT1Q08273 LTE1YAL024C 4308 nt0.44□□□□□ -2.34
HRT1Q08273 YSP1YHR155W 3687 nt0.44□□□□□ -2.34
HRT1Q08273 PET111YMR257C 2403 nt0.44□□□□□ -2.34
HRT1Q08273 SDH6YDR379C-A 240 nt0.43□□□□□ -2.34
HRT1Q08273 YLL006W-AYLL006W-A 177 nt0.43□□□□□ -2.34
HRT1Q08273 YOR225WYOR225W 330 nt0.43□□□□□ -2.34
HRT1Q08273 YOR329W-AYOR329W-A 210 nt0.43□□□□□ -2.34
HRT1Q08273 YOR170WYOR170W 306 nt0.42□□□□□ -2.34
HRT1Q08273 COG6YNL041C 2520 nt0.42□□□□□ -2.34
HRT1Q08273 tL(UAA)QtL(UAA)Q 85 nt0.41□□□□□ -2.34
HRT1Q08273 tM(CAU)Q2tM(CAU)Q2 78 nt0.41□□□□□ -2.34
HRT1Q08273 CSE1YGL238W 2883 nt0.4□□□□□ -2.34
HRT1Q08273 YDR210WYDR210W 228 nt0.4□□□□□ -2.35
HRT1Q08273 QCR9YGR183C 201 nt0.4□□□□□ -2.35
HRT1Q08273 PAU12YGR294W 363 nt0.4□□□□□ -2.35
HRT1Q08273 YLR294CYLR294C 330 nt0.39□□□□□ -2.35
HRT1Q08273 YOR314W-AYOR314W-A 111 nt0.39□□□□□ -2.35
HRT1Q08273 YDR371C-AYDR371C-A 105 nt0.38□□□□□ -2.35
HRT1Q08273 SBH1YER087C-B 249 nt0.38□□□□□ -2.35
HRT1Q08273 snR39BsnR39B 96 nt0.38□□□□□ -2.35
HRT1Q08273 snR48snR48 113 nt0.38□□□□□ -2.35
HRT1Q08273 ORC3YLL004W 1851 nt0.37□□□□□ -2.35
HRT1Q08273 RPS26AYGL189C 360 nt0.37□□□□□ -2.35
HRT1Q08273 GLG1YKR058W 1851 nt0.36□□□□□ -2.35
HRT1Q08273 YKL145W-AYKL145W-A 93 nt0.36□□□□□ -2.35
HRT1Q08273 NIP1YMR309C 2439 nt0.36□□□□□ -2.35
HRT1Q08273 YDL007C-AYDL007C-A 258 nt0.35□□□□□ -2.35
HRT1Q08273 YNL067W-BYNL067W-B 141 nt0.34□□□□□ -2.36
HRT1Q08273 tF(GAA)BtF(GAA)B 73 nt0.33□□□□□ -2.36
HRT1Q08273 tF(GAA)FtF(GAA)F 73 nt0.33□□□□□ -2.36
HRT1Q08273 tF(GAA)GtF(GAA)G 73 nt0.33□□□□□ -2.36
HRT1Q08273 tF(GAA)H1tF(GAA)H1 73 nt0.33□□□□□ -2.36
HRT1Q08273 tF(GAA)H2tF(GAA)H2 73 nt0.33□□□□□ -2.36
HRT1Q08273 tF(GAA)MtF(GAA)M 73 nt0.33□□□□□ -2.36
Retrieved 100 of 7,029 protein–RNA pairs in 31.4 ms