Protein–RNA interactions for Protein: P54730

UBX4, UBX domain-containing protein 4, yeastyeast

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBX4P54730 tF(GAA)FtF(GAA)F 73 nt0.82□□□□□ -2.28
UBX4P54730 tF(GAA)GtF(GAA)G 73 nt0.82□□□□□ -2.28
UBX4P54730 tF(GAA)H1tF(GAA)H1 73 nt0.82□□□□□ -2.28
UBX4P54730 tF(GAA)H2tF(GAA)H2 73 nt0.82□□□□□ -2.28
UBX4P54730 tF(GAA)MtF(GAA)M 73 nt0.82□□□□□ -2.28
UBX4P54730 tF(GAA)P1tF(GAA)P1 73 nt0.82□□□□□ -2.28
UBX4P54730 tF(GAA)P2tF(GAA)P2 73 nt0.82□□□□□ -2.28
UBX4P54730 YJL127W-AYJL127W-A 117 nt0.82□□□□□ -2.28
UBX4P54730 YLR041WYLR041W 321 nt0.82□□□□□ -2.28
UBX4P54730 YIL002W-AYIL002W-A 210 nt0.81□□□□□ -2.28
UBX4P54730 YIL134C-AYIL134C-A 204 nt0.81□□□□□ -2.28
UBX4P54730 YPR159C-AYPR159C-A 102 nt0.81□□□□□ -2.28
UBX4P54730 BEM3YPL115C 3387 nt0.81□□□□□ -2.28
UBX4P54730 snR8snR8 190 nt0.8□□□□□ -2.28
UBX4P54730 YER053C-AYER053C-A 114 nt0.8□□□□□ -2.28
UBX4P54730 tN(GUU)QtN(GUU)Q 71 nt0.8□□□□□ -2.28
UBX4P54730 YOR345CYOR345C 351 nt0.8□□□□□ -2.28
UBX4P54730 YCR038W-AYCR038W-A 126 nt0.79□□□□□ -2.28
UBX4P54730 YDR366CYDR366C 399 nt0.77□□□□□ -2.29
UBX4P54730 YSP1YHR155W 3687 nt0.76□□□□□ -2.29
UBX4P54730 QCR9YGR183C 201 nt0.74□□□□□ -2.29
UBX4P54730 YHR131W-AYHR131W-A 246 nt0.74□□□□□ -2.29
UBX4P54730 APQ12YIL040W 417 nt0.74□□□□□ -2.29
UBX4P54730 UTP8YGR128C 2142 nt0.73□□□□□ -2.29
UBX4P54730 PET111YMR257C 2403 nt0.73□□□□□ -2.29
UBX4P54730 TRS65YGR166W 1683 nt0.72□□□□□ -2.29
UBX4P54730 snR80snR80 171 nt0.72□□□□□ -2.29
UBX4P54730 YOR302WYOR302W 78 nt0.72□□□□□ -2.29
UBX4P54730 YIL142C-AYIL142C-A 333 nt0.71□□□□□ -2.3
UBX4P54730 YBR131C-AYBR131C-A 90 nt0.71□□□□□ -2.3
UBX4P54730 SNU13YEL026W 381 nt0.7□□□□□ -2.3
UBX4P54730 MLP1YKR095W 5628 nt0.68□□□□□ -2.3
UBX4P54730 tT(AGU)BtT(AGU)B 73 nt0.68□□□□□ -2.3
UBX4P54730 tT(AGU)CtT(AGU)C 73 nt0.68□□□□□ -2.3
UBX4P54730 tT(AGU)DtT(AGU)D 73 nt0.68□□□□□ -2.3
UBX4P54730 tT(AGU)HtT(AGU)H 73 nt0.68□□□□□ -2.3
UBX4P54730 tT(AGU)I1tT(AGU)I1 73 nt0.68□□□□□ -2.3
UBX4P54730 tT(AGU)I2tT(AGU)I2 73 nt0.68□□□□□ -2.3
UBX4P54730 tT(AGU)JtT(AGU)J 73 nt0.68□□□□□ -2.3
UBX4P54730 tT(AGU)N1tT(AGU)N1 73 nt0.68□□□□□ -2.3
UBX4P54730 tT(AGU)N2tT(AGU)N2 73 nt0.68□□□□□ -2.3
UBX4P54730 tT(AGU)O1tT(AGU)O1 73 nt0.68□□□□□ -2.3
UBX4P54730 tT(AGU)O2tT(AGU)O2 73 nt0.68□□□□□ -2.3
UBX4P54730 YMR160WYMR160W 2451 nt0.68□□□□□ -2.3
UBX4P54730 NNF2YGR089W 2811 nt0.68□□□□□ -2.3
UBX4P54730 YOL014WYOL014W 375 nt0.67□□□□□ -2.3
UBX4P54730 BIR1YJR089W 2865 nt0.67□□□□□ -2.3
UBX4P54730 YKL145W-AYKL145W-A 93 nt0.65□□□□□ -2.31
UBX4P54730 MYO1YHR023W 5787 nt0.65□□□□□ -2.31
UBX4P54730 UTP10YJL109C 5310 nt0.65□□□□□ -2.31
UBX4P54730 YLR232WYLR232W 348 nt0.64□□□□□ -2.31
UBX4P54730 YMR272W-AYMR272W-A 114 nt0.64□□□□□ -2.31
UBX4P54730 YNL097C-BYNL097C-B 123 nt0.64□□□□□ -2.31
UBX4P54730 YOR192C-BYOR192C-B 5313 nt0.63□□□□□ -2.31
UBX4P54730 YLL006W-AYLL006W-A 177 nt0.6□□□□□ -2.31
UBX4P54730 PRP39YML046W 1890 nt0.6□□□□□ -2.31
UBX4P54730 SBH1YER087C-B 249 nt0.59□□□□□ -2.31
UBX4P54730 IQG1YPL242C 4488 nt0.57□□□□□ -2.32
UBX4P54730 TAH1YCR060W 336 nt0.57□□□□□ -2.32
UBX4P54730 RPS26AYGL189C 360 nt0.57□□□□□ -2.32
UBX4P54730 NIP1YMR309C 2439 nt0.57□□□□□ -2.32
UBX4P54730 YDR371C-AYDR371C-A 105 nt0.56□□□□□ -2.32
UBX4P54730 YBR072C-AYBR072C-A 162 nt0.56□□□□□ -2.32
UBX4P54730 YJL182CYJL182C 318 nt0.55□□□□□ -2.32
UBX4P54730 ULP2YIL031W 3105 nt0.54□□□□□ -2.32
UBX4P54730 YEL014CYEL014C 306 nt0.54□□□□□ -2.32
UBX4P54730 BUL2YML111W 2763 nt0.53□□□□□ -2.32
UBX4P54730 YBL039C-AYBL039C-A 84 nt0.53□□□□□ -2.32
UBX4P54730 RPM2YML091C 3609 nt0.52□□□□□ -2.33
UBX4P54730 AI1Q0050 2505 nt0.5□□□□□ -2.33
UBX4P54730 GLG1YKR058W 1851 nt0.5□□□□□ -2.33
UBX4P54730 YGL182CYGL182C 324 nt0.49□□□□□ -2.33
UBX4P54730 THO2YNL139C 4794 nt0.49□□□□□ -2.33
UBX4P54730 ORC3YLL004W 1851 nt0.48□□□□□ -2.33
UBX4P54730 snR46snR46 197 nt0.48□□□□□ -2.33
UBX4P54730 MLP2YIL149C 5040 nt0.48□□□□□ -2.33
UBX4P54730 SPG3YDR504C 384 nt0.47□□□□□ -2.33
UBX4P54730 YMR046W-AYMR046W-A 129 nt0.47□□□□□ -2.33
UBX4P54730 YDR544CYDR544C 429 nt0.46□□□□□ -2.34
UBX4P54730 YEL073CYEL073C 324 nt0.46□□□□□ -2.34
UBX4P54730 SDH6YDR379C-A 240 nt0.45□□□□□ -2.34
UBX4P54730 YDR406W-AYDR406W-A 246 nt0.45□□□□□ -2.34
UBX4P54730 YMR158W-BYMR158W-B 321 nt0.45□□□□□ -2.34
UBX4P54730 FMP27YLR454W 7887 nt0.45□□□□□ -2.34
UBX4P54730 YLR342W-AYLR342W-A 174 nt0.44□□□□□ -2.34
UBX4P54730 snR52snR52 92 nt0.44□□□□□ -2.34
UBX4P54730 ESP1YGR098C 4893 nt0.43□□□□□ -2.34
UBX4P54730 COG6YNL041C 2520 nt0.43□□□□□ -2.34
UBX4P54730 RCO1YMR075W 2055 nt0.41□□□□□ -2.34
UBX4P54730 YOR381W-AYOR381W-A 168 nt0.41□□□□□ -2.34
UBX4P54730 JLP2YMR132C 627 nt0.39□□□□□ -2.35
UBX4P54730 YOR314W-AYOR314W-A 111 nt0.39□□□□□ -2.35
UBX4P54730 tM(CAU)Q1tM(CAU)Q1 76 nt0.38□□□□□ -2.35
UBX4P54730 YOR170WYOR170W 306 nt0.38□□□□□ -2.35
UBX4P54730 YOR186C-AYOR186C-A 210 nt0.38□□□□□ -2.35
UBX4P54730 YBL100W-BYBL100W-B 5313 nt0.38□□□□□ -2.35
UBX4P54730 CSE1YGL238W 2883 nt0.38□□□□□ -2.35
UBX4P54730 YER078W-AYER078W-A 165 nt0.34□□□□□ -2.36
UBX4P54730 YPL060C-AYPL060C-A 3315 nt0.34□□□□□ -2.36
UBX4P54730 YOL013W-AYOL013W-A 192 nt0.3□□□□□ -2.36
Retrieved 100 of 7,029 protein–RNA pairs in 61.6 ms