Protein–RNA interactions for Protein: P53115

INO80, Chromatin-remodeling ATPase INO80, yeastyeast

Predictions only

Length 1,489 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
INO80P53115 SEC10YLR166C 2616 nt-0.43□□□□□ -2.48
INO80P53115 YLR041WYLR041W 321 nt-0.44□□□□□ -2.48
INO80P53115 YOR161W-AYOR161W-A 81 nt-0.48□□□□□ -2.49
INO80P53115 YBR072C-AYBR072C-A 162 nt-0.48□□□□□ -2.49
INO80P53115 YOR121CYOR121C 306 nt-0.5□□□□□ -2.49
INO80P53115 YPL205CYPL205C 345 nt-0.5□□□□□ -2.49
INO80P53115 YAL016C-BYAL016C-B 186 nt-0.51□□□□□ -2.49
INO80P53115 YMR158W-BYMR158W-B 321 nt-0.51□□□□□ -2.49
INO80P53115 YFL063WYFL063W 456 nt-0.52□□□□□ -2.49
INO80P53115 RPM2YML091C 3609 nt-0.52□□□□□ -2.49
INO80P53115 YCR038W-AYCR038W-A 126 nt-0.54□□□□□ -2.5
INO80P53115 YBR285WYBR285W 435 nt-0.54□□□□□ -2.5
INO80P53115 YBR099CYBR099C 384 nt-0.56□□□□□ -2.5
INO80P53115 BIL1YOR304C-A 231 nt-0.58□□□□□ -2.5
INO80P53115 COG6YNL041C 2520 nt-0.58□□□□□ -2.5
INO80P53115 YIL115W-AYIL115W-A 372 nt-0.59□□□□□ -2.5
INO80P53115 YER137W-AYER137W-A 306 nt-0.6□□□□□ -2.5
INO80P53115 YDR048CYDR048C 315 nt-0.61□□□□□ -2.51
INO80P53115 YJL197C-AYJL197C-A 282 nt-0.61□□□□□ -2.51
INO80P53115 tT(UGU)G1tT(UGU)G1 72 nt-0.61□□□□□ -2.51
INO80P53115 tT(UGU)G2tT(UGU)G2 72 nt-0.61□□□□□ -2.51
INO80P53115 tT(UGU)PtT(UGU)P 72 nt-0.61□□□□□ -2.51
INO80P53115 YMR001C-AYMR001C-A 231 nt-0.62□□□□□ -2.51
INO80P53115 YMR193C-AYMR193C-A 387 nt-0.62□□□□□ -2.51
INO80P53115 YNL324WYNL324W 396 nt-0.64□□□□□ -2.51
INO80P53115 AGA2YGL032C 264 nt-0.65□□□□□ -2.51
INO80P53115 YAL063C-AYAL063C-A 291 nt-0.65□□□□□ -2.51
INO80P53115 snR161snR161 161 nt-0.65□□□□□ -2.51
INO80P53115 YLL019W-AYLL019W-A 93 nt-0.66□□□□□ -2.51
INO80P53115 EST1YLR233C 2100 nt-0.67□□□□□ -2.52
INO80P53115 YIR030W-AYIR030W-A 384 nt-0.7□□□□□ -2.52
INO80P53115 YOR072W-BYOR072W-B 162 nt-0.7□□□□□ -2.52
INO80P53115 YER053C-AYER053C-A 114 nt-0.71□□□□□ -2.52
INO80P53115 tW(UCA)QtW(UCA)Q 74 nt-0.73□□□□□ -2.53
INO80P53115 YER079WYER079W 633 nt-0.74□□□□□ -2.53
INO80P53115 SDH6YDR379C-A 240 nt-0.75□□□□□ -2.53
INO80P53115 YGR069WYGR069W 336 nt-0.75□□□□□ -2.53
INO80P53115 YBR223W-AYBR223W-A 120 nt-0.75□□□□□ -2.53
INO80P53115 snR60snR60 104 nt-0.77□□□□□ -2.53
INO80P53115 YHL009W-BYHL009W-B 5409 nt-0.77□□□□□ -2.53
INO80P53115 YAL068W-AYAL068W-A 255 nt-0.8□□□□□ -2.54
INO80P53115 YPR016W-AYPR016W-A 261 nt-0.82□□□□□ -2.54
INO80P53115 YLR264C-AYLR264C-A 117 nt-0.83□□□□□ -2.54
INO80P53115 YNL028WYNL028W 318 nt-0.83□□□□□ -2.54
INO80P53115 YGR035CYGR035C 351 nt-0.84□□□□□ -2.54
INO80P53115 YIL002W-AYIL002W-A 210 nt-0.84□□□□□ -2.54
INO80P53115 APQ12YIL040W 417 nt-0.85□□□□□ -2.55
INO80P53115 YIL032CYIL032C 357 nt-0.88□□□□□ -2.55
INO80P53115 Q0017Q0017 162 nt-0.88□□□□□ -2.55
INO80P53115 HTL1YCR020W-B 237 nt-0.89□□□□□ -2.55
INO80P53115 YIL071W-AYIL071W-A 477 nt-0.89□□□□□ -2.55
INO80P53115 HMRA1YCR097W 381 nt-0.92□□□□□ -2.56
INO80P53115 YOR293C-AYOR293C-A 150 nt-0.94□□□□□ -2.56
INO80P53115 snR36snR36 182 nt-0.95□□□□□ -2.56
INO80P53115 YGL149WYGL149W 306 nt-0.97□□□□□ -2.56
INO80P53115 YJR157WYJR157W 363 nt-1□□□□□ -2.57
INO80P53115 YDR544CYDR544C 429 nt-1.02□□□□□ -2.57
INO80P53115 YOR015WYOR015W 360 nt-1.02□□□□□ -2.57
INO80P53115 YLR154W-FYLR154W-F 141 nt-1.06□□□□□ -2.58
INO80P53115 YDR183C-AYDR183C-A 258 nt-1.08□□□□□ -2.58
INO80P53115 tA(UGC)QtA(UGC)Q 76 nt-1.09□□□□□ -2.58
INO80P53115 YJL077W-AYJL077W-A 87 nt-1.09□□□□□ -2.58
INO80P53115 snR33snR33 183 nt-1.09□□□□□ -2.58
INO80P53115 YOR314W-AYOR314W-A 111 nt-1.1□□□□□ -2.59
INO80P53115 YDR102CYDR102C 333 nt-1.11□□□□□ -2.59
INO80P53115 YML100W-AYML100W-A 174 nt-1.11□□□□□ -2.59
INO80P53115 YLR120W-AYLR120W-A 102 nt-1.12□□□□□ -2.59
INO80P53115 ATP6Q0085 780 nt-1.12□□□□□ -2.59
INO80P53115 PAU9YBL108C-A 129 nt-1.13□□□□□ -2.59
INO80P53115 YDL007C-AYDL007C-A 258 nt-1.14□□□□□ -2.59
INO80P53115 YNL067W-BYNL067W-B 141 nt-1.15□□□□□ -2.59
INO80P53115 YBL039C-AYBL039C-A 84 nt-1.16□□□□□ -2.59
INO80P53115 YGL052WYGL052W 306 nt-1.17□□□□□ -2.6
INO80P53115 YPL038W-AYPL038W-A 192 nt-1.17□□□□□ -2.6
INO80P53115 YDR157WYDR157W 402 nt-1.18□□□□□ -2.6
INO80P53115 YAF9YNL107W 681 nt-1.18□□□□□ -2.6
INO80P53115 YMR172C-AYMR172C-A 384 nt-1.2□□□□□ -2.6
INO80P53115 snR74snR74 88 nt-1.22□□□□□ -2.6
INO80P53115 tQ(UUG)QtQ(UUG)Q 76 nt-1.24□□□□□ -2.61
INO80P53115 YOR008C-AYOR008C-A 225 nt-1.26□□□□□ -2.61
INO80P53115 YML099W-AYML099W-A 330 nt-1.27□□□□□ -2.61
INO80P53115 YPR197CYPR197C 564 nt-1.27□□□□□ -2.61
INO80P53115 YFL032WYFL032W 321 nt-1.28□□□□□ -2.61
INO80P53115 YPR010C-AYPR010C-A 219 nt-1.28□□□□□ -2.61
INO80P53115 YGL182CYGL182C 324 nt-1.29□□□□□ -2.62
INO80P53115 YLR222C-AYLR222C-A 231 nt-1.34□□□□□ -2.62
INO80P53115 RPL39YJL189W 156 nt-1.35□□□□□ -2.63
INO80P53115 YOL166W-AYOL166W-A 156 nt-1.35□□□□□ -2.63
INO80P53115 YJL182CYJL182C 318 nt-1.36□□□□□ -2.63
INO80P53115 snR49snR49 165 nt-1.36□□□□□ -2.63
INO80P53115 YGL041CYGL041C 204 nt-1.38□□□□□ -2.63
INO80P53115 YBR182C-AYBR182C-A 195 nt-1.39□□□□□ -2.63
INO80P53115 YER090C-AYER090C-A 90 nt-1.43□□□□□ -2.64
INO80P53115 YER097WYER097W 330 nt-1.43□□□□□ -2.64
INO80P53115 tM(CAU)Q2tM(CAU)Q2 78 nt-1.44□□□□□ -2.64
INO80P53115 YDL240C-AYDL240C-A 138 nt-1.46□□□□□ -2.64
INO80P53115 snR69snR69 101 nt-1.47□□□□□ -2.64
INO80P53115 YKL118WYKL118W 312 nt-1.5□□□□□ -2.65
INO80P53115 YOR381W-AYOR381W-A 168 nt-1.5□□□□□ -2.65
INO80P53115 YGR146C-AYGR146C-A 162 nt-1.51□□□□□ -2.65
Retrieved 100 of 7,029 protein–RNA pairs in 30.2 ms