Protein–RNA interactions for Protein: P47171

HIR3, Histone transcription regulator 3, yeastyeast

Predictions only

Length 1,648 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HIR3P47171 YAR029WYAR029W 225 nt-3.31□□□□□ -2.94
HIR3P47171 YOR309CYOR309C 381 nt-3.31□□□□□ -2.94
HIR3P47171 YER090C-AYER090C-A 90 nt-3.34□□□□□ -2.94
HIR3P47171 YMR172C-AYMR172C-A 384 nt-3.34□□□□□ -2.94
HIR3P47171 YJR087WYJR087W 351 nt-3.37□□□□□ -2.95
HIR3P47171 YML054C-AYML054C-A 159 nt-3.37□□□□□ -2.95
HIR3P47171 tQ(UUG)QtQ(UUG)Q 76 nt-3.38□□□□□ -2.95
HIR3P47171 YLR334CYLR334C 381 nt-3.4□□□□□ -2.95
HIR3P47171 YDR048CYDR048C 315 nt-3.41□□□□□ -2.95
HIR3P47171 YHR007C-AYHR007C-A 216 nt-3.41□□□□□ -2.95
HIR3P47171 YNL303WYNL303W 348 nt-3.43□□□□□ -2.96
HIR3P47171 YCR001WYCR001W 315 nt-3.44□□□□□ -2.96
HIR3P47171 MRPL32YCR003W 552 nt-3.44□□□□□ -2.96
HIR3P47171 YDR354C-AYDR354C-A 144 nt-3.44□□□□□ -2.96
HIR3P47171 YOR364WYOR364W 369 nt-3.44□□□□□ -2.96
HIR3P47171 YLR456WYLR456W 615 nt-3.44□□□□□ -2.96
HIR3P47171 YNL266WYNL266W 420 nt-3.45□□□□□ -2.96
HIR3P47171 ATP19YOL077W-A 207 nt-3.46□□□□□ -2.96
HIR3P47171 YGL230CYGL230C 444 nt-3.47□□□□□ -2.96
HIR3P47171 YAF9YNL107W 681 nt-3.47□□□□□ -2.96
HIR3P47171 YFL012WYFL012W 447 nt-3.48□□□□□ -2.97
HIR3P47171 YOL083C-AYOL083C-A 141 nt-3.48□□□□□ -2.97
HIR3P47171 YKL083WYKL083W 615 nt-3.48□□□□□ -2.97
HIR3P47171 YNL146C-AYNL146C-A 195 nt-3.49□□□□□ -2.97
HIR3P47171 PRM3YPL192C 402 nt-3.51□□□□□ -2.97
HIR3P47171 BUD26YDR241W 288 nt-3.53□□□□□ -2.97
HIR3P47171 YNL171CYNL171C 369 nt-3.55□□□□□ -2.98
HIR3P47171 YDR220CYDR220C 294 nt-3.6□□□□□ -2.99
HIR3P47171 IRC13YOR235W 315 nt-3.6□□□□□ -2.99
HIR3P47171 snR50snR50 90 nt-3.6□□□□□ -2.99
HIR3P47171 YLR269CYLR269C 351 nt-3.61□□□□□ -2.99
HIR3P47171 YPR002C-AYPR002C-A 198 nt-3.62□□□□□ -2.99
HIR3P47171 YEL020C-BYEL020C-B 198 nt-3.62□□□□□ -2.99
HIR3P47171 GPI15YNL038W 690 nt-3.64□□□□□ -2.99
HIR3P47171 YGR270C-AYGR270C-A 219 nt-3.65□□□□□ -2.99
HIR3P47171 YPR039WYPR039W 336 nt-3.65□□□□□ -2.99
HIR3P47171 YDR524W-CYDR524W-C 90 nt-3.66□□□□□ -3
HIR3P47171 YMR013C-AYMR013C-A 150 nt-3.66□□□□□ -3
HIR3P47171 YHR050W-AYHR050W-A 171 nt-3.67□□□□□ -3
HIR3P47171 TOM22YNL131W 459 nt-3.74□□□□□ -3.01
HIR3P47171 YJR162CYJR162C 351 nt-3.77□□□□□ -3.01
HIR3P47171 YNL337WYNL337W 255 nt-3.77□□□□□ -3.01
HIR3P47171 YDR426CYDR426C 378 nt-3.78□□□□□ -3.01
HIR3P47171 YDR544CYDR544C 429 nt-3.78□□□□□ -3.01
HIR3P47171 snR67snR67 82 nt-3.81□□□□□ -3.02
HIR3P47171 YDL011CYDL011C 324 nt-3.81□□□□□ -3.02
HIR3P47171 YLR342W-AYLR342W-A 174 nt-3.86□□□□□ -3.03
HIR3P47171 POP6YGR030C 477 nt-3.87□□□□□ -3.03
HIR3P47171 YOR008C-AYOR008C-A 225 nt-3.89□□□□□ -3.03
HIR3P47171 snR69snR69 101 nt-3.91□□□□□ -3.03
HIR3P47171 YLR217WYLR217W 324 nt-3.92□□□□□ -3.04
HIR3P47171 YOR314W-AYOR314W-A 111 nt-3.93□□□□□ -3.04
HIR3P47171 YBR182C-AYBR182C-A 195 nt-3.98□□□□□ -3.05
HIR3P47171 YGR069WYGR069W 336 nt-4.01□□□□□ -3.05
HIR3P47171 TSC3YBR058C-A 243 nt-4.03□□□□□ -3.06
HIR3P47171 YML099W-AYML099W-A 330 nt-4.05□□□□□ -3.06
HIR3P47171 YDR102CYDR102C 333 nt-4.1□□□□□ -3.07
HIR3P47171 YLR163W-AYLR163W-A 114 nt-4.1□□□□□ -3.07
HIR3P47171 YIL029CYIL029C 429 nt-4.12□□□□□ -3.07
HIR3P47171 YOR376W-AYOR376W-A 156 nt-4.12□□□□□ -3.07
HIR3P47171 YBL071CYBL071C 309 nt-4.17□□□□□ -3.08
HIR3P47171 YGL149WYGL149W 306 nt-4.17□□□□□ -3.08
HIR3P47171 PCC1YKR095W-A 267 nt-4.18□□□□□ -3.08
HIR3P47171 YER137W-AYER137W-A 306 nt-4.21□□□□□ -3.08
HIR3P47171 YDL158CYDL158C 309 nt-4.22□□□□□ -3.09
HIR3P47171 YLL019W-AYLL019W-A 93 nt-4.22□□□□□ -3.09
HIR3P47171 YPR197CYPR197C 564 nt-4.28□□□□□ -3.09
HIR3P47171 snR57snR57 88 nt-4.28□□□□□ -3.1
HIR3P47171 YER097WYER097W 330 nt-4.28□□□□□ -3.1
HIR3P47171 YER181CYER181C 324 nt-4.28□□□□□ -3.1
HIR3P47171 YER175W-AYER175W-A 165 nt-4.29□□□□□ -3.1
HIR3P47171 snR9snR9 187 nt-4.32□□□□□ -3.1
HIR3P47171 STE18YJR086W 333 nt-4.32□□□□□ -3.1
HIR3P47171 HMRA1YCR097W 381 nt-4.33□□□□□ -3.1
HIR3P47171 YGR174W-AYGR174W-A 87 nt-4.34□□□□□ -3.1
HIR3P47171 YOR316C-AYOR316C-A 210 nt-4.35□□□□□ -3.11
HIR3P47171 tD(GUC)QtD(GUC)Q 75 nt-4.38□□□□□ -3.11
HIR3P47171 YDR524C-AYDR524C-A 120 nt-4.38□□□□□ -3.11
HIR3P47171 YLR286W-AYLR286W-A 135 nt-4.39□□□□□ -3.11
HIR3P47171 YJL197C-AYJL197C-A 282 nt-4.39□□□□□ -3.11
HIR3P47171 YBR196C-AYBR196C-A 150 nt-4.43□□□□□ -3.12
HIR3P47171 AI5_BETAQ0075 1065 nt-4.46□□□□□ -3.12
HIR3P47171 YOL155W-AYOL155W-A 135 nt-4.48□□□□□ -3.13
HIR3P47171 snR6snR6 112 nt-4.5□□□□□ -3.13
HIR3P47171 YOL038C-AYOL038C-A 96 nt-4.5□□□□□ -3.13
HIR3P47171 snR55snR55 98 nt-4.54□□□□□ -3.14
HIR3P47171 YDL159C-BYDL159C-B 177 nt-4.54□□□□□ -3.14
HIR3P47171 YDL016CYDL016C 303 nt-4.56□□□□□ -3.14
HIR3P47171 YNL198CYNL198C 303 nt-4.57□□□□□ -3.14
HIR3P47171 ATG16YMR159C 453 nt-4.6□□□□□ -3.15
HIR3P47171 YGR146C-AYGR146C-A 162 nt-4.61□□□□□ -3.15
HIR3P47171 YAR047CYAR047C 321 nt-4.64□□□□□ -3.15
HIR3P47171 YOR072W-BYOR072W-B 162 nt-4.65□□□□□ -3.15
HIR3P47171 YIL115W-AYIL115W-A 372 nt-4.68□□□□□ -3.16
HIR3P47171 YFL019CYFL019C 354 nt-4.71□□□□□ -3.16
HIR3P47171 YHR180C-BYHR180C-B 105 nt-4.72□□□□□ -3.17
HIR3P47171 snR73snR73 106 nt-4.74□□□□□ -3.17
HIR3P47171 YPR012WYPR012W 255 nt-4.74□□□□□ -3.17
HIR3P47171 YJR157WYJR157W 363 nt-4.75□□□□□ -3.17
HIR3P47171 YOL013W-BYOL013W-B 291 nt-4.75□□□□□ -3.17
Retrieved 100 of 7,029 protein–RNA pairs in 30.3 ms