Protein–RNA interactions for Protein: P47064

APS3, AP-3 complex subunit sigma, yeastyeast

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
APS3P47064 tW(UCA)QtW(UCA)Q 74 nt-0.55□□□□□ -2.5
APS3P47064 YKL100W-AYKL100W-A 90 nt-0.55□□□□□ -2.5
APS3P47064 YDR048CYDR048C 315 nt-0.56□□□□□ -2.5
APS3P47064 YLR264C-AYLR264C-A 117 nt-0.56□□□□□ -2.5
APS3P47064 YER137W-AYER137W-A 306 nt-0.57□□□□□ -2.5
APS3P47064 YLR406C-AYLR406C-A 150 nt-0.57□□□□□ -2.5
APS3P47064 YIL071W-AYIL071W-A 477 nt-0.59□□□□□ -2.5
APS3P47064 GLG1YKR058W 1851 nt-0.59□□□□□ -2.5
APS3P47064 YDR544CYDR544C 429 nt-0.6□□□□□ -2.51
APS3P47064 YIR030W-AYIR030W-A 384 nt-0.6□□□□□ -2.51
APS3P47064 YNL067W-BYNL067W-B 141 nt-0.6□□□□□ -2.51
APS3P47064 YPR016W-AYPR016W-A 261 nt-0.6□□□□□ -2.51
APS3P47064 YJL197C-AYJL197C-A 282 nt-0.61□□□□□ -2.51
APS3P47064 YMR001C-AYMR001C-A 231 nt-0.61□□□□□ -2.51
APS3P47064 YMR193C-AYMR193C-A 387 nt-0.62□□□□□ -2.51
APS3P47064 AGA2YGL032C 264 nt-0.63□□□□□ -2.51
APS3P47064 snR60snR60 104 nt-0.65□□□□□ -2.51
APS3P47064 YDL007C-AYDL007C-A 258 nt-0.65□□□□□ -2.51
APS3P47064 APQ12YIL040W 417 nt-0.65□□□□□ -2.51
APS3P47064 YOR121CYOR121C 306 nt-0.65□□□□□ -2.51
APS3P47064 YBR285WYBR285W 435 nt-0.65□□□□□ -2.51
APS3P47064 URB1YKL014C 5295 nt-0.65□□□□□ -2.51
APS3P47064 PAU9YBL108C-A 129 nt-0.66□□□□□ -2.52
APS3P47064 YCR038W-AYCR038W-A 126 nt-0.67□□□□□ -2.52
APS3P47064 TAH1YCR060W 336 nt-0.67□□□□□ -2.52
APS3P47064 YDL158CYDL158C 309 nt-0.67□□□□□ -2.52
APS3P47064 YER079WYER079W 633 nt-0.67□□□□□ -2.52
APS3P47064 YPR170W-AYPR170W-A 186 nt-0.67□□□□□ -2.52
APS3P47064 YEL050W-AYEL050W-A 192 nt-0.68□□□□□ -2.52
APS3P47064 HMRA1YCR097W 381 nt-0.69□□□□□ -2.52
APS3P47064 snR36snR36 182 nt-0.69□□□□□ -2.52
APS3P47064 YIL002W-AYIL002W-A 210 nt-0.71□□□□□ -2.52
APS3P47064 YLR202CYLR202C 327 nt-0.71□□□□□ -2.52
APS3P47064 YOR072W-BYOR072W-B 162 nt-0.71□□□□□ -2.52
APS3P47064 tA(UGC)QtA(UGC)Q 76 nt-0.73□□□□□ -2.53
APS3P47064 YJL113WYJL113W 4647 nt-0.73□□□□□ -2.53
APS3P47064 YML100W-AYML100W-A 174 nt-0.74□□□□□ -2.53
APS3P47064 COG6YNL041C 2520 nt-0.74□□□□□ -2.53
APS3P47064 YOR015WYOR015W 360 nt-0.75□□□□□ -2.53
APS3P47064 RPM2YML091C 3609 nt-0.75□□□□□ -2.53
APS3P47064 BIL1YOR304C-A 231 nt-0.76□□□□□ -2.53
APS3P47064 YKL063CYKL063C 504 nt-0.77□□□□□ -2.53
APS3P47064 YIL032CYIL032C 357 nt-0.78□□□□□ -2.53
APS3P47064 YPL060C-AYPL060C-A 3315 nt-0.78□□□□□ -2.53
APS3P47064 snR33snR33 183 nt-0.79□□□□□ -2.54
APS3P47064 snR74snR74 88 nt-0.8□□□□□ -2.54
APS3P47064 YOR293C-AYOR293C-A 150 nt-0.8□□□□□ -2.54
APS3P47064 YNL324WYNL324W 396 nt-0.81□□□□□ -2.54
APS3P47064 snR189snR189 189 nt-0.82□□□□□ -2.54
APS3P47064 YGL052WYGL052W 306 nt-0.83□□□□□ -2.54
APS3P47064 ATP6Q0085 780 nt-0.84□□□□□ -2.54
APS3P47064 YJR157WYJR157W 363 nt-0.84□□□□□ -2.54
APS3P47064 YML099W-AYML099W-A 330 nt-0.84□□□□□ -2.54
APS3P47064 YBL039C-AYBL039C-A 84 nt-0.84□□□□□ -2.54
APS3P47064 YNL028WYNL028W 318 nt-0.84□□□□□ -2.54
APS3P47064 tQ(UUG)QtQ(UUG)Q 76 nt-0.85□□□□□ -2.55
APS3P47064 HTL1YCR020W-B 237 nt-0.86□□□□□ -2.55
APS3P47064 YGL149WYGL149W 306 nt-0.86□□□□□ -2.55
APS3P47064 YGR035CYGR035C 351 nt-0.87□□□□□ -2.55
APS3P47064 YAL068W-AYAL068W-A 255 nt-0.87□□□□□ -2.55
APS3P47064 YLR120W-AYLR120W-A 102 nt-0.87□□□□□ -2.55
APS3P47064 YOR314W-AYOR314W-A 111 nt-0.87□□□□□ -2.55
APS3P47064 YLR154W-FYLR154W-F 141 nt-0.88□□□□□ -2.55
APS3P47064 YPR010C-AYPR010C-A 219 nt-0.88□□□□□ -2.55
APS3P47064 YAL016C-BYAL016C-B 186 nt-0.89□□□□□ -2.55
APS3P47064 YOR170WYOR170W 306 nt-0.89□□□□□ -2.55
APS3P47064 snR49snR49 165 nt-0.9□□□□□ -2.55
APS3P47064 tT(UGU)G1tT(UGU)G1 72 nt-0.91□□□□□ -2.56
APS3P47064 tT(UGU)G2tT(UGU)G2 72 nt-0.91□□□□□ -2.56
APS3P47064 tT(UGU)PtT(UGU)P 72 nt-0.91□□□□□ -2.56
APS3P47064 YAF9YNL107W 681 nt-0.92□□□□□ -2.56
APS3P47064 YDR102CYDR102C 333 nt-0.95□□□□□ -2.56
APS3P47064 YJL182CYJL182C 318 nt-0.95□□□□□ -2.56
APS3P47064 YMR172C-AYMR172C-A 384 nt-0.95□□□□□ -2.56
APS3P47064 YJL077W-AYJL077W-A 87 nt-0.96□□□□□ -2.56
APS3P47064 YFL032WYFL032W 321 nt-0.97□□□□□ -2.56
APS3P47064 YAL063C-AYAL063C-A 291 nt-0.97□□□□□ -2.56
APS3P47064 YGL182CYGL182C 324 nt-0.98□□□□□ -2.57
APS3P47064 snR69snR69 101 nt-1□□□□□ -2.57
APS3P47064 YGL041CYGL041C 204 nt-1.01□□□□□ -2.57
APS3P47064 snR50snR50 90 nt-1.02□□□□□ -2.57
APS3P47064 YNL266WYNL266W 420 nt-1.03□□□□□ -2.57
APS3P47064 YDR183C-AYDR183C-A 258 nt-1.04□□□□□ -2.58
APS3P47064 YER090C-AYER090C-A 90 nt-1.04□□□□□ -2.58
APS3P47064 YFL019CYFL019C 354 nt-1.06□□□□□ -2.58
APS3P47064 YEL014CYEL014C 306 nt-1.07□□□□□ -2.58
APS3P47064 YHL009W-BYHL009W-B 5409 nt-1.09□□□□□ -2.58
APS3P47064 tM(CAU)Q2tM(CAU)Q2 78 nt-1.09□□□□□ -2.58
APS3P47064 snR161snR161 161 nt-1.09□□□□□ -2.58
APS3P47064 JLP2YMR132C 627 nt-1.1□□□□□ -2.59
APS3P47064 YER097WYER097W 330 nt-1.11□□□□□ -2.59
APS3P47064 YOR381W-AYOR381W-A 168 nt-1.11□□□□□ -2.59
APS3P47064 RDS3YPR094W 324 nt-1.12□□□□□ -2.59
APS3P47064 tP(UGG)QtP(UGG)Q 72 nt-1.13□□□□□ -2.59
APS3P47064 YBR131C-AYBR131C-A 90 nt-1.13□□□□□ -2.59
APS3P47064 YBR182C-AYBR182C-A 195 nt-1.14□□□□□ -2.59
APS3P47064 PMP2YEL017C-A 132 nt-1.15□□□□□ -2.59
APS3P47064 YPR197CYPR197C 564 nt-1.16□□□□□ -2.6
APS3P47064 snR39BsnR39B 96 nt-1.17□□□□□ -2.6
APS3P47064 YPL038W-AYPL038W-A 192 nt-1.18□□□□□ -2.6
Retrieved 100 of 7,029 protein–RNA pairs in 13.1 ms