Protein–RNA interactions for Protein: P40357

SEC9, Protein transport protein SEC9, yeastyeast

Predictions only

Length 651 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SEC9P40357 tT(AGU)DtT(AGU)D 73 nt0.72□□□□□ -2.29
SEC9P40357 tT(AGU)HtT(AGU)H 73 nt0.72□□□□□ -2.29
SEC9P40357 tT(AGU)I1tT(AGU)I1 73 nt0.72□□□□□ -2.29
SEC9P40357 tT(AGU)I2tT(AGU)I2 73 nt0.72□□□□□ -2.29
SEC9P40357 tT(AGU)JtT(AGU)J 73 nt0.72□□□□□ -2.29
SEC9P40357 tT(AGU)N1tT(AGU)N1 73 nt0.72□□□□□ -2.29
SEC9P40357 tT(AGU)N2tT(AGU)N2 73 nt0.72□□□□□ -2.29
SEC9P40357 tT(AGU)O1tT(AGU)O1 73 nt0.72□□□□□ -2.29
SEC9P40357 tT(AGU)O2tT(AGU)O2 73 nt0.72□□□□□ -2.29
SEC9P40357 YPR160W-AYPR160W-A 81 nt0.72□□□□□ -2.29
SEC9P40357 snR46snR46 197 nt0.72□□□□□ -2.29
SEC9P40357 YIL002W-AYIL002W-A 210 nt0.71□□□□□ -2.3
SEC9P40357 COX5BYIL111W 456 nt0.71□□□□□ -2.3
SEC9P40357 BLI1YKL061W 342 nt0.71□□□□□ -2.3
SEC9P40357 YLR041WYLR041W 321 nt0.71□□□□□ -2.3
SEC9P40357 PRP5YBR237W 2550 nt0.71□□□□□ -2.3
SEC9P40357 YMR272W-AYMR272W-A 114 nt0.7□□□□□ -2.3
SEC9P40357 CHS6YJL099W 2241 nt0.69□□□□□ -2.3
SEC9P40357 tN(GUU)QtN(GUU)Q 71 nt0.69□□□□□ -2.3
SEC9P40357 YEL014CYEL014C 306 nt0.68□□□□□ -2.3
SEC9P40357 YIL142C-AYIL142C-A 333 nt0.68□□□□□ -2.3
SEC9P40357 YJL182CYJL182C 318 nt0.68□□□□□ -2.3
SEC9P40357 YMR046W-AYMR046W-A 129 nt0.68□□□□□ -2.3
SEC9P40357 PRP39YML046W 1890 nt0.67□□□□□ -2.3
SEC9P40357 tM(CAU)Q1tM(CAU)Q1 76 nt0.67□□□□□ -2.3
SEC9P40357 SEC8YPR055W 3198 nt0.67□□□□□ -2.3
SEC9P40357 YML002WYML002W 2214 nt0.66□□□□□ -2.3
SEC9P40357 FYV10YIL097W 1551 nt0.66□□□□□ -2.3
SEC9P40357 YJL150WYJL150W 303 nt0.66□□□□□ -2.3
SEC9P40357 YDR406W-AYDR406W-A 246 nt0.65□□□□□ -2.31
SEC9P40357 YLR399W-AYLR399W-A 105 nt0.65□□□□□ -2.31
SEC9P40357 LTE1YAL024C 4308 nt0.64□□□□□ -2.31
SEC9P40357 OST4YDL232W 111 nt0.64□□□□□ -2.31
SEC9P40357 HUG1YML058W-A 207 nt0.63□□□□□ -2.31
SEC9P40357 PRP42YDR235W 1635 nt0.63□□□□□ -2.31
SEC9P40357 STF2YGR008C 255 nt0.62□□□□□ -2.31
SEC9P40357 FMP27YLR454W 7887 nt0.61□□□□□ -2.31
SEC9P40357 YKL100W-AYKL100W-A 90 nt0.6□□□□□ -2.31
SEC9P40357 YHR131W-AYHR131W-A 246 nt0.59□□□□□ -2.31
SEC9P40357 snR52snR52 92 nt0.59□□□□□ -2.31
SEC9P40357 YBL039C-AYBL039C-A 84 nt0.58□□□□□ -2.32
SEC9P40357 YNL198CYNL198C 303 nt0.58□□□□□ -2.32
SEC9P40357 SNU13YEL026W 381 nt0.56□□□□□ -2.32
SEC9P40357 TRS65YGR166W 1683 nt0.56□□□□□ -2.32
SEC9P40357 UTP10YJL109C 5310 nt0.55□□□□□ -2.32
SEC9P40357 YOR192C-BYOR192C-B 5313 nt0.55□□□□□ -2.32
SEC9P40357 TAH1YCR060W 336 nt0.55□□□□□ -2.32
SEC9P40357 YGL182CYGL182C 324 nt0.55□□□□□ -2.32
SEC9P40357 YJL127W-AYJL127W-A 117 nt0.55□□□□□ -2.32
SEC9P40357 YEL073CYEL073C 324 nt0.53□□□□□ -2.32
SEC9P40357 BUL2YML111W 2763 nt0.52□□□□□ -2.33
SEC9P40357 YMR160WYMR160W 2451 nt0.52□□□□□ -2.33
SEC9P40357 YOR381W-AYOR381W-A 168 nt0.52□□□□□ -2.33
SEC9P40357 YSP1YHR155W 3687 nt0.52□□□□□ -2.33
SEC9P40357 UTP8YGR128C 2142 nt0.52□□□□□ -2.33
SEC9P40357 BEM3YPL115C 3387 nt0.51□□□□□ -2.33
SEC9P40357 YDR544CYDR544C 429 nt0.51□□□□□ -2.33
SEC9P40357 YLR232WYLR232W 348 nt0.51□□□□□ -2.33
SEC9P40357 YLR466C-BYLR466C-B 117 nt0.51□□□□□ -2.33
SEC9P40357 YBL053WYBL053W 375 nt0.51□□□□□ -2.33
SEC9P40357 YLR342W-AYLR342W-A 174 nt0.5□□□□□ -2.33
SEC9P40357 YNL337WYNL337W 255 nt0.5□□□□□ -2.33
SEC9P40357 YOR170WYOR170W 306 nt0.5□□□□□ -2.33
SEC9P40357 PAU12YGR294W 363 nt0.49□□□□□ -2.33
SEC9P40357 UTP20YBL004W 7482 nt0.49□□□□□ -2.33
SEC9P40357 YGR151CYGR151C 336 nt0.48□□□□□ -2.33
SEC9P40357 YOR225WYOR225W 330 nt0.48□□□□□ -2.33
SEC9P40357 YPL060C-AYPL060C-A 3315 nt0.48□□□□□ -2.33
SEC9P40357 NNF2YGR089W 2811 nt0.48□□□□□ -2.33
SEC9P40357 PET111YMR257C 2403 nt0.46□□□□□ -2.34
SEC9P40357 SDH6YDR379C-A 240 nt0.46□□□□□ -2.34
SEC9P40357 tL(UAA)QtL(UAA)Q 85 nt0.46□□□□□ -2.34
SEC9P40357 snR48snR48 113 nt0.46□□□□□ -2.34
SEC9P40357 NIP1YMR309C 2439 nt0.46□□□□□ -2.34
SEC9P40357 COG6YNL041C 2520 nt0.45□□□□□ -2.34
SEC9P40357 YGL007C-AYGL007C-A 87 nt0.45□□□□□ -2.34
SEC9P40357 RPS26AYGL189C 360 nt0.45□□□□□ -2.34
SEC9P40357 YBR072C-AYBR072C-A 162 nt0.45□□□□□ -2.34
SEC9P40357 ORC3YLL004W 1851 nt0.44□□□□□ -2.34
SEC9P40357 tF(GAA)BtF(GAA)B 73 nt0.44□□□□□ -2.34
SEC9P40357 YDR371C-AYDR371C-A 105 nt0.44□□□□□ -2.34
SEC9P40357 tF(GAA)FtF(GAA)F 73 nt0.44□□□□□ -2.34
SEC9P40357 tF(GAA)GtF(GAA)G 73 nt0.44□□□□□ -2.34
SEC9P40357 tF(GAA)H1tF(GAA)H1 73 nt0.44□□□□□ -2.34
SEC9P40357 tF(GAA)H2tF(GAA)H2 73 nt0.44□□□□□ -2.34
SEC9P40357 tF(GAA)MtF(GAA)M 73 nt0.44□□□□□ -2.34
SEC9P40357 tF(GAA)P1tF(GAA)P1 73 nt0.44□□□□□ -2.34
SEC9P40357 tF(GAA)P2tF(GAA)P2 73 nt0.44□□□□□ -2.34
SEC9P40357 YOR314W-AYOR314W-A 111 nt0.44□□□□□ -2.34
SEC9P40357 snR39BsnR39B 96 nt0.44□□□□□ -2.34
SEC9P40357 SBH1YER087C-B 249 nt0.43□□□□□ -2.34
SEC9P40357 YLL006W-AYLL006W-A 177 nt0.43□□□□□ -2.34
SEC9P40357 YNL338WYNL338W 159 nt0.42□□□□□ -2.34
SEC9P40357 YOR329W-AYOR329W-A 210 nt0.42□□□□□ -2.34
SEC9P40357 ULP2YIL031W 3105 nt0.41□□□□□ -2.34
SEC9P40357 Q0032Q0032 291 nt0.41□□□□□ -2.34
SEC9P40357 YNL054W-BYNL054W-B 5250 nt0.4□□□□□ -2.35
SEC9P40357 GLG1YKR058W 1851 nt0.4□□□□□ -2.35
SEC9P40357 BIR1YJR089W 2865 nt0.39□□□□□ -2.35
SEC9P40357 YDR210WYDR210W 228 nt0.39□□□□□ -2.35
Retrieved 100 of 7,029 protein–RNA pairs in 41.6 ms