Protein–RNA interactions for Protein: P40070

LSM4, U6 snRNA-associated Sm-like protein LSm4, yeastyeast

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM4P40070 YMR172C-AYMR172C-A 384 nt0.4□□□□□ -2.35
LSM4P40070 YPR010C-AYPR010C-A 219 nt0.4□□□□□ -2.35
LSM4P40070 FMP27YLR454W 7887 nt0.4□□□□□ -2.35
LSM4P40070 YGL052WYGL052W 306 nt0.39□□□□□ -2.35
LSM4P40070 YOR008C-AYOR008C-A 225 nt0.39□□□□□ -2.35
LSM4P40070 YPR092WYPR092W 306 nt0.39□□□□□ -2.35
LSM4P40070 snR65snR65 100 nt0.38□□□□□ -2.35
LSM4P40070 snR74snR74 88 nt0.38□□□□□ -2.35
LSM4P40070 COX5BYIL111W 456 nt0.38□□□□□ -2.35
LSM4P40070 YLR282CYLR282C 342 nt0.38□□□□□ -2.35
LSM4P40070 YNL146WYNL146W 303 nt0.38□□□□□ -2.35
LSM4P40070 YOR072W-BYOR072W-B 162 nt0.38□□□□□ -2.35
LSM4P40070 COY1YKL179C 2040 nt0.38□□□□□ -2.35
LSM4P40070 OST4YDL232W 111 nt0.37□□□□□ -2.35
LSM4P40070 YJL127W-AYJL127W-A 117 nt0.37□□□□□ -2.35
LSM4P40070 YOR161W-AYOR161W-A 81 nt0.37□□□□□ -2.35
LSM4P40070 ULI1YFR026C 510 nt0.36□□□□□ -2.35
LSM4P40070 tN(GUU)QtN(GUU)Q 71 nt0.36□□□□□ -2.35
LSM4P40070 PRP42YDR235W 1635 nt0.35□□□□□ -2.35
LSM4P40070 YCR022CYCR022C 345 nt0.35□□□□□ -2.35
LSM4P40070 YGL123C-AYGL123C-A 231 nt0.35□□□□□ -2.35
LSM4P40070 YOR345CYOR345C 351 nt0.35□□□□□ -2.35
LSM4P40070 BEM3YPL115C 3387 nt0.35□□□□□ -2.35
LSM4P40070 YIL134C-AYIL134C-A 204 nt0.34□□□□□ -2.36
LSM4P40070 YLR041WYLR041W 321 nt0.34□□□□□ -2.36
LSM4P40070 BLI1YKL061W 342 nt0.33□□□□□ -2.36
LSM4P40070 COX12YLR038C 252 nt0.33□□□□□ -2.36
LSM4P40070 YKL100W-AYKL100W-A 90 nt0.32□□□□□ -2.36
LSM4P40070 YOR231C-AYOR231C-A 201 nt0.32□□□□□ -2.36
LSM4P40070 YSP1YHR155W 3687 nt0.32□□□□□ -2.36
LSM4P40070 YIR030W-AYIR030W-A 384 nt0.31□□□□□ -2.36
LSM4P40070 PET111YMR257C 2403 nt0.3□□□□□ -2.36
LSM4P40070 YOR192C-BYOR192C-B 5313 nt0.3□□□□□ -2.36
LSM4P40070 tF(GAA)QtF(GAA)Q 75 nt0.3□□□□□ -2.36
LSM4P40070 YER053C-AYER053C-A 114 nt0.3□□□□□ -2.36
LSM4P40070 YPL152W-AYPL152W-A 99 nt0.3□□□□□ -2.36
LSM4P40070 ABF2YMR072W 552 nt0.29□□□□□ -2.36
LSM4P40070 SBH1YER087C-B 249 nt0.28□□□□□ -2.36
LSM4P40070 YHR131W-AYHR131W-A 246 nt0.28□□□□□ -2.36
LSM4P40070 snR49snR49 165 nt0.28□□□□□ -2.36
LSM4P40070 YKU70YMR284W 1809 nt0.27□□□□□ -2.37
LSM4P40070 NNF2YGR089W 2811 nt0.27□□□□□ -2.37
LSM4P40070 YCR038W-AYCR038W-A 126 nt0.27□□□□□ -2.37
LSM4P40070 YIL002W-AYIL002W-A 210 nt0.27□□□□□ -2.37
LSM4P40070 YBR182C-AYBR182C-A 195 nt0.27□□□□□ -2.37
LSM4P40070 snR55snR55 98 nt0.26□□□□□ -2.37
LSM4P40070 YDR366CYDR366C 399 nt0.26□□□□□ -2.37
LSM4P40070 SNU13YEL026W 381 nt0.26□□□□□ -2.37
LSM4P40070 IQG1YPL242C 4488 nt0.26□□□□□ -2.37
LSM4P40070 MLP1YKR095W 5628 nt0.25□□□□□ -2.37
LSM4P40070 YDR371C-AYDR371C-A 105 nt0.25□□□□□ -2.37
LSM4P40070 YER181CYER181C 324 nt0.25□□□□□ -2.37
LSM4P40070 RPS26AYGL189C 360 nt0.25□□□□□ -2.37
LSM4P40070 NIP1YMR309C 2439 nt0.24□□□□□ -2.37
LSM4P40070 APQ12YIL040W 417 nt0.23□□□□□ -2.37
LSM4P40070 YOL155W-AYOL155W-A 135 nt0.23□□□□□ -2.37
LSM4P40070 ORC3YLL004W 1851 nt0.22□□□□□ -2.37
LSM4P40070 YGL041CYGL041C 204 nt0.22□□□□□ -2.37
LSM4P40070 YLL006W-AYLL006W-A 177 nt0.22□□□□□ -2.37
LSM4P40070 YML099W-AYML099W-A 330 nt0.21□□□□□ -2.38
LSM4P40070 YGL188C-AYGL188C-A 141 nt0.2□□□□□ -2.38
LSM4P40070 YBL100W-BYBL100W-B 5313 nt0.2□□□□□ -2.38
LSM4P40070 THO2YNL139C 4794 nt0.2□□□□□ -2.38
LSM4P40070 RCO1YMR075W 2055 nt0.19□□□□□ -2.38
LSM4P40070 YLR232WYLR232W 348 nt0.19□□□□□ -2.38
LSM4P40070 YBR131C-AYBR131C-A 90 nt0.19□□□□□ -2.38
LSM4P40070 ESP1YGR098C 4893 nt0.18□□□□□ -2.38
LSM4P40070 YNL054W-BYNL054W-B 5250 nt0.18□□□□□ -2.38
LSM4P40070 YOR302WYOR302W 78 nt0.18□□□□□ -2.38
LSM4P40070 YBR072C-AYBR072C-A 162 nt0.18□□□□□ -2.38
LSM4P40070 YNL097C-BYNL097C-B 123 nt0.17□□□□□ -2.38
LSM4P40070 MLP2YIL149C 5040 nt0.16□□□□□ -2.38
LSM4P40070 YEL073CYEL073C 324 nt0.16□□□□□ -2.38
LSM4P40070 snR45snR45 172 nt0.16□□□□□ -2.38
LSM4P40070 snR80snR80 171 nt0.15□□□□□ -2.39
LSM4P40070 YBL039C-AYBL039C-A 84 nt0.15□□□□□ -2.39
LSM4P40070 GLG1YKR058W 1851 nt0.15□□□□□ -2.39
LSM4P40070 MYO1YHR023W 5787 nt0.14□□□□□ -2.39
LSM4P40070 SDH6YDR379C-A 240 nt0.14□□□□□ -2.39
LSM4P40070 YMR158W-BYMR158W-B 321 nt0.14□□□□□ -2.39
LSM4P40070 YOL013W-AYOL013W-A 192 nt0.14□□□□□ -2.39
LSM4P40070 YDR544CYDR544C 429 nt0.13□□□□□ -2.39
LSM4P40070 YJL182CYJL182C 318 nt0.13□□□□□ -2.39
LSM4P40070 YEL014CYEL014C 306 nt0.12□□□□□ -2.39
LSM4P40070 YOR186C-AYOR186C-A 210 nt0.12□□□□□ -2.39
LSM4P40070 RPM2YML091C 3609 nt0.12□□□□□ -2.39
LSM4P40070 YGL182CYGL182C 324 nt0.11□□□□□ -2.39
LSM4P40070 COG6YNL041C 2520 nt0.11□□□□□ -2.39
LSM4P40070 snR8snR8 190 nt0.1□□□□□ -2.39
LSM4P40070 YOR314W-AYOR314W-A 111 nt0.08□□□□□ -2.4
LSM4P40070 CSE1YGL238W 2883 nt0.08□□□□□ -2.4
LSM4P40070 SOV1YMR066W 2697 nt0.07□□□□□ -2.4
LSM4P40070 YOR381W-AYOR381W-A 168 nt0.06□□□□□ -2.4
LSM4P40070 YBR099CYBR099C 384 nt0.06□□□□□ -2.4
LSM4P40070 YPL060C-AYPL060C-A 3315 nt0.06□□□□□ -2.4
LSM4P40070 snR46snR46 197 nt0.05□□□□□ -2.4
LSM4P40070 YOR170WYOR170W 306 nt0.04□□□□□ -2.4
LSM4P40070 EST1YLR233C 2100 nt0.01□□□□□ -2.41
LSM4P40070 TFB5YDR079C-A 219 nt0□□□□□ -2.41
LSM4P40070 YDR210WYDR210W 228 nt0□□□□□ -2.41
Retrieved 100 of 7,029 protein–RNA pairs in 46.2 ms