Protein–RNA interactions for Protein: P38902

RPB11, DNA-directed RNA polymerase II subunit RPB11, yeastyeast

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB11P38902 YBR223W-AYBR223W-A 120 nt-1.52□□□□□ -2.65
RPB11P38902 YER084W-AYER084W-A 513 nt-1.56□□□□□ -2.66
RPB11P38902 YMR193C-AYMR193C-A 387 nt-1.58□□□□□ -2.66
RPB11P38902 YER053C-AYER053C-A 114 nt-1.59□□□□□ -2.66
RPB11P38902 MPC1YGL080W 393 nt-1.61□□□□□ -2.67
RPB11P38902 snR49snR49 165 nt-1.61□□□□□ -2.67
RPB11P38902 RPS27BYHR021C 249 nt-1.62□□□□□ -2.67
RPB11P38902 VPS20YMR077C 666 nt-1.62□□□□□ -2.67
RPB11P38902 APQ12YIL040W 417 nt-1.64□□□□□ -2.67
RPB11P38902 YJL047C-AYJL047C-A 135 nt-1.64□□□□□ -2.67
RPB11P38902 CSE2YNR010W 450 nt-1.65□□□□□ -2.67
RPB11P38902 YGL052WYGL052W 306 nt-1.66□□□□□ -2.68
RPB11P38902 YGR069WYGR069W 336 nt-1.67□□□□□ -2.68
RPB11P38902 EAF6YJR082C 342 nt-1.67□□□□□ -2.68
RPB11P38902 CSN9YDR179C 489 nt-1.7□□□□□ -2.68
RPB11P38902 YGL182CYGL182C 324 nt-1.7□□□□□ -2.68
RPB11P38902 YLR154W-FYLR154W-F 141 nt-1.7□□□□□ -2.68
RPB11P38902 YPR010C-AYPR010C-A 219 nt-1.7□□□□□ -2.68
RPB11P38902 snR54snR54 86 nt-1.7□□□□□ -2.68
RPB11P38902 YDR544CYDR544C 429 nt-1.71□□□□□ -2.68
RPB11P38902 YJL197C-AYJL197C-A 282 nt-1.72□□□□□ -2.68
RPB11P38902 YLL019W-AYLL019W-A 93 nt-1.72□□□□□ -2.68
RPB11P38902 TOM22YNL131W 459 nt-1.73□□□□□ -2.69
RPB11P38902 YOR170WYOR170W 306 nt-1.74□□□□□ -2.69
RPB11P38902 TAH1YCR060W 336 nt-1.75□□□□□ -2.69
RPB11P38902 YIL115W-AYIL115W-A 372 nt-1.75□□□□□ -2.69
RPB11P38902 tP(UGG)QtP(UGG)Q 72 nt-1.77□□□□□ -2.69
RPB11P38902 Q0255Q0255 1419 nt-1.77□□□□□ -2.69
RPB11P38902 YJL077W-AYJL077W-A 87 nt-1.78□□□□□ -2.69
RPB11P38902 BI2Q0110 1272 nt-1.79□□□□□ -2.7
RPB11P38902 YLR285C-AYLR285C-A 171 nt-1.81□□□□□ -2.7
RPB11P38902 YAF9YNL107W 681 nt-1.82□□□□□ -2.7
RPB11P38902 YER006C-AYER006C-A 318 nt-1.83□□□□□ -2.7
RPB11P38902 tQ(UUG)QtQ(UUG)Q 76 nt-1.84□□□□□ -2.7
RPB11P38902 HMRA1YCR097W 381 nt-1.86□□□□□ -2.71
RPB11P38902 YOR015WYOR015W 360 nt-1.88□□□□□ -2.71
RPB11P38902 YML099W-AYML099W-A 330 nt-1.92□□□□□ -2.72
RPB11P38902 YPR016W-AYPR016W-A 261 nt-1.92□□□□□ -2.72
RPB11P38902 YIL032CYIL032C 357 nt-1.93□□□□□ -2.72
RPB11P38902 YOR072W-BYOR072W-B 162 nt-1.93□□□□□ -2.72
RPB11P38902 YER137W-AYER137W-A 306 nt-1.94□□□□□ -2.72
RPB11P38902 YOR314W-AYOR314W-A 111 nt-1.94□□□□□ -2.72
RPB11P38902 snR74snR74 88 nt-1.95□□□□□ -2.72
RPB11P38902 YKL123WYKL123W 381 nt-1.95□□□□□ -2.72
RPB11P38902 YGL149WYGL149W 306 nt-1.96□□□□□ -2.72
RPB11P38902 JLP2YMR132C 627 nt-1.96□□□□□ -2.72
RPB11P38902 YNR077CYNR077C 255 nt-1.96□□□□□ -2.72
RPB11P38902 snR41snR41 95 nt-1.98□□□□□ -2.73
RPB11P38902 STE18YJR086W 333 nt-1.99□□□□□ -2.73
RPB11P38902 YDR048CYDR048C 315 nt-2.01□□□□□ -2.73
RPB11P38902 YER090C-AYER090C-A 90 nt-2.01□□□□□ -2.73
RPB11P38902 YLR434CYLR434C 384 nt-2.02□□□□□ -2.73
RPB11P38902 YNL266WYNL266W 420 nt-2.02□□□□□ -2.73
RPB11P38902 YBL039C-AYBL039C-A 84 nt-2.03□□□□□ -2.73
RPB11P38902 YNL122CYNL122C 348 nt-2.03□□□□□ -2.73
RPB11P38902 snR189snR189 189 nt-2.03□□□□□ -2.73
RPB11P38902 snR69snR69 101 nt-2.04□□□□□ -2.74
RPB11P38902 snR50snR50 90 nt-2.05□□□□□ -2.74
RPB11P38902 snR60snR60 104 nt-2.08□□□□□ -2.74
RPB11P38902 YDL158CYDL158C 309 nt-2.08□□□□□ -2.74
RPB11P38902 SKI7YOR076C 2244 nt-2.08□□□□□ -2.74
RPB11P38902 YOR121CYOR121C 306 nt-2.09□□□□□ -2.74
RPB11P38902 YBR285WYBR285W 435 nt-2.11□□□□□ -2.75
RPB11P38902 YDR102CYDR102C 333 nt-2.13□□□□□ -2.75
RPB11P38902 tY(GUA)QtY(GUA)Q 84 nt-2.17□□□□□ -2.76
RPB11P38902 RDS3YPR094W 324 nt-2.17□□□□□ -2.76
RPB11P38902 tW(UCA)QtW(UCA)Q 74 nt-2.2□□□□□ -2.76
RPB11P38902 snR67snR67 82 nt-2.24□□□□□ -2.77
RPB11P38902 YMR001C-AYMR001C-A 231 nt-2.24□□□□□ -2.77
RPB11P38902 YLR406C-AYLR406C-A 150 nt-2.26□□□□□ -2.77
RPB11P38902 YNL028WYNL028W 318 nt-2.27□□□□□ -2.77
RPB11P38902 YER097WYER097W 330 nt-2.29□□□□□ -2.78
RPB11P38902 YFL032WYFL032W 321 nt-2.29□□□□□ -2.78
RPB11P38902 YNL324WYNL324W 396 nt-2.29□□□□□ -2.78
RPB11P38902 PMP2YEL017C-A 132 nt-2.31□□□□□ -2.78
RPB11P38902 CDC65tQ(CUG)M 72 nt-2.32□□□□□ -2.78
RPB11P38902 BIL1YOR304C-A 231 nt-2.35□□□□□ -2.79
RPB11P38902 YGR240C-AYGR240C-A 201 nt-2.37□□□□□ -2.79
RPB11P38902 YML054C-AYML054C-A 159 nt-2.37□□□□□ -2.79
RPB11P38902 YOL013W-BYOL013W-B 291 nt-2.37□□□□□ -2.79
RPB11P38902 ATP6Q0085 780 nt-2.38□□□□□ -2.79
RPB11P38902 tM(CAU)Q2tM(CAU)Q2 78 nt-2.38□□□□□ -2.79
RPB11P38902 YLR120W-AYLR120W-A 102 nt-2.39□□□□□ -2.79
RPB11P38902 YLR202CYLR202C 327 nt-2.39□□□□□ -2.79
RPB11P38902 HTL1YCR020W-B 237 nt-2.4□□□□□ -2.79
RPB11P38902 YNR025CYNR025C 360 nt-2.4□□□□□ -2.79
RPB11P38902 YGR146C-AYGR146C-A 162 nt-2.42□□□□□ -2.8
RPB11P38902 YNL205CYNL205C 423 nt-2.42□□□□□ -2.8
RPB11P38902 YOR008C-AYOR008C-A 225 nt-2.44□□□□□ -2.8
RPB11P38902 snR77snR77 88 nt-2.47□□□□□ -2.8
RPB11P38902 YGL041CYGL041C 204 nt-2.48□□□□□ -2.81
RPB11P38902 snR39BsnR39B 96 nt-2.48□□□□□ -2.81
RPB11P38902 tD(GUC)QtD(GUC)Q 75 nt-2.5□□□□□ -2.81
RPB11P38902 YFL019CYFL019C 354 nt-2.5□□□□□ -2.81
RPB11P38902 YLR286W-AYLR286W-A 135 nt-2.5□□□□□ -2.81
RPB11P38902 YKL063CYKL063C 504 nt-2.51□□□□□ -2.81
RPB11P38902 YOR381W-AYOR381W-A 168 nt-2.51□□□□□ -2.81
RPB11P38902 snR81snR81 201 nt-2.52□□□□□ -2.81
RPB11P38902 YMR315W-AYMR315W-A 108 nt-2.55□□□□□ -2.82
RPB11P38902 ATP19YOL077W-A 207 nt-2.56□□□□□ -2.82
Retrieved 100 of 7,029 protein–RNA pairs in 12.1 ms