Protein–RNA interactions for Protein: P38329

VHC1, Vacuolar cation-chloride cotransporter 1, yeastyeast

Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VHC1P38329 ULI1YFR026C 510 nt0.71□□□□□ -2.3
VHC1P38329 YKL145W-AYKL145W-A 93 nt0.71□□□□□ -2.3
VHC1P38329 COX12YLR038C 252 nt0.71□□□□□ -2.3
VHC1P38329 YCR022CYCR022C 345 nt0.7□□□□□ -2.3
VHC1P38329 tT(AGU)BtT(AGU)B 73 nt0.7□□□□□ -2.3
VHC1P38329 tT(AGU)CtT(AGU)C 73 nt0.7□□□□□ -2.3
VHC1P38329 tT(AGU)DtT(AGU)D 73 nt0.7□□□□□ -2.3
VHC1P38329 tT(AGU)HtT(AGU)H 73 nt0.7□□□□□ -2.3
VHC1P38329 tT(AGU)I1tT(AGU)I1 73 nt0.7□□□□□ -2.3
VHC1P38329 tT(AGU)I2tT(AGU)I2 73 nt0.7□□□□□ -2.3
VHC1P38329 tT(AGU)JtT(AGU)J 73 nt0.7□□□□□ -2.3
VHC1P38329 tT(AGU)N1tT(AGU)N1 73 nt0.7□□□□□ -2.3
VHC1P38329 tT(AGU)N2tT(AGU)N2 73 nt0.7□□□□□ -2.3
VHC1P38329 tT(AGU)O1tT(AGU)O1 73 nt0.7□□□□□ -2.3
VHC1P38329 tT(AGU)O2tT(AGU)O2 73 nt0.7□□□□□ -2.3
VHC1P38329 YKL100W-AYKL100W-A 90 nt0.7□□□□□ -2.3
VHC1P38329 YOL155W-AYOL155W-A 135 nt0.7□□□□□ -2.3
VHC1P38329 OST4YDL232W 111 nt0.69□□□□□ -2.3
VHC1P38329 YIL134C-AYIL134C-A 204 nt0.69□□□□□ -2.3
VHC1P38329 YLR041WYLR041W 321 nt0.69□□□□□ -2.3
VHC1P38329 LTE1YAL024C 4308 nt0.68□□□□□ -2.3
VHC1P38329 YGL188C-AYGL188C-A 141 nt0.68□□□□□ -2.3
VHC1P38329 ABF2YMR072W 552 nt0.68□□□□□ -2.3
VHC1P38329 tN(GUU)QtN(GUU)Q 71 nt0.67□□□□□ -2.3
VHC1P38329 PRP42YDR235W 1635 nt0.67□□□□□ -2.3
VHC1P38329 BEM3YPL115C 3387 nt0.66□□□□□ -2.3
VHC1P38329 YGL041CYGL041C 204 nt0.66□□□□□ -2.3
VHC1P38329 YJL127W-AYJL127W-A 117 nt0.66□□□□□ -2.3
VHC1P38329 YPR159C-AYPR159C-A 102 nt0.66□□□□□ -2.3
VHC1P38329 YOR345CYOR345C 351 nt0.65□□□□□ -2.31
VHC1P38329 YER053C-AYER053C-A 114 nt0.64□□□□□ -2.31
VHC1P38329 YIL002W-AYIL002W-A 210 nt0.64□□□□□ -2.31
VHC1P38329 BIR1YJR089W 2865 nt0.63□□□□□ -2.31
VHC1P38329 YMR272W-AYMR272W-A 114 nt0.63□□□□□ -2.31
VHC1P38329 YCR038W-AYCR038W-A 126 nt0.61□□□□□ -2.31
VHC1P38329 snR8snR8 190 nt0.6□□□□□ -2.31
VHC1P38329 YDR366CYDR366C 399 nt0.6□□□□□ -2.31
VHC1P38329 TRS65YGR166W 1683 nt0.59□□□□□ -2.31
VHC1P38329 snR80snR80 171 nt0.59□□□□□ -2.31
VHC1P38329 YHR131W-AYHR131W-A 246 nt0.59□□□□□ -2.31
VHC1P38329 YOR302WYOR302W 78 nt0.59□□□□□ -2.31
VHC1P38329 YSP1YHR155W 3687 nt0.59□□□□□ -2.32
VHC1P38329 APQ12YIL040W 417 nt0.58□□□□□ -2.32
VHC1P38329 PET111YMR257C 2403 nt0.56□□□□□ -2.32
VHC1P38329 YNL097C-BYNL097C-B 123 nt0.56□□□□□ -2.32
VHC1P38329 YBR131C-AYBR131C-A 90 nt0.56□□□□□ -2.32
VHC1P38329 SNU13YEL026W 381 nt0.55□□□□□ -2.32
VHC1P38329 MYO1YHR023W 5787 nt0.55□□□□□ -2.32
VHC1P38329 ULP2YIL031W 3105 nt0.54□□□□□ -2.32
VHC1P38329 UTP10YJL109C 5310 nt0.54□□□□□ -2.32
VHC1P38329 NNF2YGR089W 2811 nt0.53□□□□□ -2.32
VHC1P38329 AI1Q0050 2505 nt0.53□□□□□ -2.33
VHC1P38329 YOR192C-BYOR192C-B 5313 nt0.52□□□□□ -2.33
VHC1P38329 UTP8YGR128C 2142 nt0.51□□□□□ -2.33
VHC1P38329 PRP39YML046W 1890 nt0.5□□□□□ -2.33
VHC1P38329 MLP1YKR095W 5628 nt0.5□□□□□ -2.33
VHC1P38329 SBH1YER087C-B 249 nt0.49□□□□□ -2.33
VHC1P38329 FMP27YLR454W 7887 nt0.48□□□□□ -2.33
VHC1P38329 YLR232WYLR232W 348 nt0.48□□□□□ -2.33
VHC1P38329 IQG1YPL242C 4488 nt0.47□□□□□ -2.33
VHC1P38329 BUL2YML111W 2763 nt0.47□□□□□ -2.33
VHC1P38329 NIP1YMR309C 2439 nt0.47□□□□□ -2.33
VHC1P38329 RPS26AYGL189C 360 nt0.46□□□□□ -2.34
VHC1P38329 YLL006W-AYLL006W-A 177 nt0.46□□□□□ -2.34
VHC1P38329 YDR371C-AYDR371C-A 105 nt0.45□□□□□ -2.34
VHC1P38329 TAH1YCR060W 336 nt0.44□□□□□ -2.34
VHC1P38329 YJL182CYJL182C 318 nt0.44□□□□□ -2.34
VHC1P38329 YBR072C-AYBR072C-A 162 nt0.43□□□□□ -2.34
VHC1P38329 YEL014CYEL014C 306 nt0.42□□□□□ -2.34
VHC1P38329 YBL039C-AYBL039C-A 84 nt0.42□□□□□ -2.34
VHC1P38329 RPM2YML091C 3609 nt0.42□□□□□ -2.34
VHC1P38329 ORC3YLL004W 1851 nt0.41□□□□□ -2.34
VHC1P38329 snR46snR46 197 nt0.4□□□□□ -2.35
VHC1P38329 YER078W-AYER078W-A 165 nt0.39□□□□□ -2.35
VHC1P38329 YGL182CYGL182C 324 nt0.39□□□□□ -2.35
VHC1P38329 THO2YNL139C 4794 nt0.38□□□□□ -2.35
VHC1P38329 GLG1YKR058W 1851 nt0.37□□□□□ -2.35
VHC1P38329 SDH6YDR379C-A 240 nt0.36□□□□□ -2.35
VHC1P38329 RCO1YMR075W 2055 nt0.36□□□□□ -2.35
VHC1P38329 MLP2YIL149C 5040 nt0.35□□□□□ -2.35
VHC1P38329 YDR544CYDR544C 429 nt0.35□□□□□ -2.35
VHC1P38329 YBL100W-BYBL100W-B 5313 nt0.34□□□□□ -2.36
VHC1P38329 COG6YNL041C 2520 nt0.33□□□□□ -2.36
VHC1P38329 YEL073CYEL073C 324 nt0.33□□□□□ -2.36
VHC1P38329 YMR158W-BYMR158W-B 321 nt0.33□□□□□ -2.36
VHC1P38329 SPG3YDR504C 384 nt0.31□□□□□ -2.36
VHC1P38329 YOR381W-AYOR381W-A 168 nt0.31□□□□□ -2.36
VHC1P38329 ESP1YGR098C 4893 nt0.31□□□□□ -2.36
VHC1P38329 YMR046W-AYMR046W-A 129 nt0.3□□□□□ -2.36
VHC1P38329 YOR170WYOR170W 306 nt0.3□□□□□ -2.36
VHC1P38329 YOR314W-AYOR314W-A 111 nt0.3□□□□□ -2.36
VHC1P38329 YNL054W-BYNL054W-B 5250 nt0.29□□□□□ -2.36
VHC1P38329 snR52snR52 92 nt0.29□□□□□ -2.36
VHC1P38329 YDR406W-AYDR406W-A 246 nt0.28□□□□□ -2.36
VHC1P38329 JLP2YMR132C 627 nt0.27□□□□□ -2.37
VHC1P38329 YLR342W-AYLR342W-A 174 nt0.26□□□□□ -2.37
VHC1P38329 YOR186C-AYOR186C-A 210 nt0.26□□□□□ -2.37
VHC1P38329 YOL013W-AYOL013W-A 192 nt0.25□□□□□ -2.37
VHC1P38329 CSE1YGL238W 2883 nt0.24□□□□□ -2.37
VHC1P38329 YPL060C-AYPL060C-A 3315 nt0.23□□□□□ -2.37
Retrieved 100 of 7,029 protein–RNA pairs in 29.8 ms