Protein–RNA interactions for Protein: P38123

SWD3, COMPASS component SWD3, yeastyeast

Predictions only

Length 315 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SWD3P38123 tV(UAC)BtV(UAC)B 74 nt0.91□□□□□ -2.26
SWD3P38123 tV(UAC)DtV(UAC)D 74 nt0.91□□□□□ -2.26
SWD3P38123 YDL007C-AYDL007C-A 258 nt0.9□□□□□ -2.27
SWD3P38123 BUD3YCL014W 4911 nt0.9□□□□□ -2.27
SWD3P38123 CLU1YMR012W 3834 nt0.89□□□□□ -2.27
SWD3P38123 FYV10YIL097W 1551 nt0.89□□□□□ -2.27
SWD3P38123 IML1YJR138W 4755 nt0.89□□□□□ -2.27
SWD3P38123 YOR102WYOR102W 351 nt0.88□□□□□ -2.27
SWD3P38123 YGR130CYGR130C 2451 nt0.88□□□□□ -2.27
SWD3P38123 ASE1YOR058C 2658 nt0.87□□□□□ -2.27
SWD3P38123 Q0092Q0092 141 nt0.87□□□□□ -2.27
SWD3P38123 BEM2YER155C 6504 nt0.87□□□□□ -2.27
SWD3P38123 VAM6YDL077C 3150 nt0.86□□□□□ -2.27
SWD3P38123 SEC8YPR055W 3198 nt0.86□□□□□ -2.27
SWD3P38123 YGL182CYGL182C 324 nt0.86□□□□□ -2.27
SWD3P38123 YOR170WYOR170W 306 nt0.86□□□□□ -2.27
SWD3P38123 PRP16YKR086W 3216 nt0.85□□□□□ -2.27
SWD3P38123 NST1YNL091W 3723 nt0.85□□□□□ -2.27
SWD3P38123 YBL053WYBL053W 375 nt0.85□□□□□ -2.27
SWD3P38123 YJR029WYJR029W 5268 nt0.85□□□□□ -2.27
SWD3P38123 YPR137C-BYPR137C-B 5268 nt0.85□□□□□ -2.27
SWD3P38123 TAH1YCR060W 336 nt0.84□□□□□ -2.27
SWD3P38123 ATP8Q0080 147 nt0.84□□□□□ -2.27
SWD3P38123 SNU13YEL026W 381 nt0.83□□□□□ -2.28
SWD3P38123 YLR041WYLR041W 321 nt0.83□□□□□ -2.28
SWD3P38123 YLR232WYLR232W 348 nt0.83□□□□□ -2.28
SWD3P38123 YBL039C-AYBL039C-A 84 nt0.83□□□□□ -2.28
SWD3P38123 KAP120YPL125W 3099 nt0.83□□□□□ -2.28
SWD3P38123 EMT1tM(CAU)D 73 nt0.82□□□□□ -2.28
SWD3P38123 EMT5tM(CAU)J1 73 nt0.82□□□□□ -2.28
SWD3P38123 EMT3tM(CAU)J2 73 nt0.82□□□□□ -2.28
SWD3P38123 EMT4tM(CAU)M 73 nt0.82□□□□□ -2.28
SWD3P38123 EMT2tM(CAU)O2 73 nt0.82□□□□□ -2.28
SWD3P38123 YGR164WYGR164W 336 nt0.82□□□□□ -2.28
SWD3P38123 YLR399W-AYLR399W-A 105 nt0.82□□□□□ -2.28
SWD3P38123 YOR314W-AYOR314W-A 111 nt0.82□□□□□ -2.28
SWD3P38123 snR48snR48 113 nt0.82□□□□□ -2.28
SWD3P38123 YNL170WYNL170W 396 nt0.81□□□□□ -2.28
SWD3P38123 CHS6YJL099W 2241 nt0.81□□□□□ -2.28
SWD3P38123 YPR160W-AYPR160W-A 81 nt0.8□□□□□ -2.28
SWD3P38123 BEM3YPL115C 3387 nt0.8□□□□□ -2.28
SWD3P38123 YHR131W-AYHR131W-A 246 nt0.79□□□□□ -2.28
SWD3P38123 SCC2YDR180W 4482 nt0.78□□□□□ -2.28
SWD3P38123 YDR544CYDR544C 429 nt0.78□□□□□ -2.28
SWD3P38123 tL(UAA)QtL(UAA)Q 85 nt0.77□□□□□ -2.29
SWD3P38123 tN(GUU)QtN(GUU)Q 71 nt0.77□□□□□ -2.29
SWD3P38123 PAU24YBR301W 363 nt0.77□□□□□ -2.29
SWD3P38123 UBP3YER151C 2739 nt0.76□□□□□ -2.29
SWD3P38123 SDH6YDR379C-A 240 nt0.76□□□□□ -2.29
SWD3P38123 tM(CAU)Q2tM(CAU)Q2 78 nt0.76□□□□□ -2.29
SWD3P38123 YOR329W-AYOR329W-A 210 nt0.76□□□□□ -2.29
SWD3P38123 YDL073WYDL073W 2955 nt0.75□□□□□ -2.29
SWD3P38123 QCR9YGR183C 201 nt0.74□□□□□ -2.29
SWD3P38123 YSP1YHR155W 3687 nt0.73□□□□□ -2.29
SWD3P38123 RKR1YMR247C 4689 nt0.73□□□□□ -2.29
SWD3P38123 YNL067W-BYNL067W-B 141 nt0.72□□□□□ -2.29
SWD3P38123 DOP1YDR141C 5097 nt0.72□□□□□ -2.29
SWD3P38123 COG6YNL041C 2520 nt0.7□□□□□ -2.3
SWD3P38123 OST4YDL232W 111 nt0.7□□□□□ -2.3
SWD3P38123 YPR117WYPR117W 7470 nt0.69□□□□□ -2.3
SWD3P38123 snR39BsnR39B 96 nt0.69□□□□□ -2.3
SWD3P38123 YBR072C-AYBR072C-A 162 nt0.68□□□□□ -2.3
SWD3P38123 YDR210WYDR210W 228 nt0.67□□□□□ -2.3
SWD3P38123 YCL001W-BYCL001W-B 255 nt0.67□□□□□ -2.3
SWD3P38123 YJL127W-AYJL127W-A 117 nt0.66□□□□□ -2.3
SWD3P38123 SEC1YDR164C 2175 nt0.65□□□□□ -2.31
SWD3P38123 YLL006W-AYLL006W-A 177 nt0.64□□□□□ -2.31
SWD3P38123 GLG1YKR058W 1851 nt0.64□□□□□ -2.31
SWD3P38123 NNF2YGR089W 2811 nt0.63□□□□□ -2.31
SWD3P38123 YCR095W-AYCR095W-A 159 nt0.63□□□□□ -2.31
SWD3P38123 SOM1YEL059C-A 225 nt0.63□□□□□ -2.31
SWD3P38123 ULP2YIL031W 3105 nt0.62□□□□□ -2.31
SWD3P38123 YGR146C-AYGR146C-A 162 nt0.61□□□□□ -2.31
SWD3P38123 YOR192C-BYOR192C-B 5313 nt0.6□□□□□ -2.31
SWD3P38123 RPM2YML091C 3609 nt0.59□□□□□ -2.32
SWD3P38123 CSE1YGL238W 2883 nt0.59□□□□□ -2.32
SWD3P38123 YBR099CYBR099C 384 nt0.58□□□□□ -2.32
SWD3P38123 PET111YMR257C 2403 nt0.57□□□□□ -2.32
SWD3P38123 tT(AGU)BtT(AGU)B 73 nt0.57□□□□□ -2.32
SWD3P38123 tT(AGU)CtT(AGU)C 73 nt0.57□□□□□ -2.32
SWD3P38123 tT(AGU)DtT(AGU)D 73 nt0.57□□□□□ -2.32
SWD3P38123 tT(AGU)HtT(AGU)H 73 nt0.57□□□□□ -2.32
SWD3P38123 tT(AGU)I1tT(AGU)I1 73 nt0.57□□□□□ -2.32
SWD3P38123 tT(AGU)I2tT(AGU)I2 73 nt0.57□□□□□ -2.32
SWD3P38123 tT(AGU)JtT(AGU)J 73 nt0.57□□□□□ -2.32
SWD3P38123 tT(AGU)N1tT(AGU)N1 73 nt0.57□□□□□ -2.32
SWD3P38123 tT(AGU)N2tT(AGU)N2 73 nt0.57□□□□□ -2.32
SWD3P38123 tT(AGU)O1tT(AGU)O1 73 nt0.57□□□□□ -2.32
SWD3P38123 tT(AGU)O2tT(AGU)O2 73 nt0.57□□□□□ -2.32
SWD3P38123 STF2YGR008C 255 nt0.56□□□□□ -2.32
SWD3P38123 YIL142C-AYIL142C-A 333 nt0.56□□□□□ -2.32
SWD3P38123 HUG1YML058W-A 207 nt0.56□□□□□ -2.32
SWD3P38123 YNL205CYNL205C 423 nt0.56□□□□□ -2.32
SWD3P38123 LTE1YAL024C 4308 nt0.55□□□□□ -2.32
SWD3P38123 YIL071W-AYIL071W-A 477 nt0.55□□□□□ -2.32
SWD3P38123 YMR272W-AYMR272W-A 114 nt0.55□□□□□ -2.32
SWD3P38123 YPR159C-AYPR159C-A 102 nt0.54□□□□□ -2.32
SWD3P38123 NIP1YMR309C 2439 nt0.54□□□□□ -2.32
SWD3P38123 UTP10YJL109C 5310 nt0.53□□□□□ -2.33
SWD3P38123 RPS26AYGL189C 360 nt0.52□□□□□ -2.33
Retrieved 100 of 7,029 protein–RNA pairs in 22.2 ms