Protein–RNA interactions for Protein: P33890

TIR2, Cold shock-induced protein TIR2, yeastyeast

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TIR2P33890 YER053C-AYER053C-A 114 nt0.49□□□□□ -2.33
TIR2P33890 tT(AGU)BtT(AGU)B 73 nt0.49□□□□□ -2.33
TIR2P33890 tT(AGU)CtT(AGU)C 73 nt0.49□□□□□ -2.33
TIR2P33890 tT(AGU)DtT(AGU)D 73 nt0.49□□□□□ -2.33
TIR2P33890 tT(AGU)HtT(AGU)H 73 nt0.49□□□□□ -2.33
TIR2P33890 tT(AGU)I1tT(AGU)I1 73 nt0.49□□□□□ -2.33
TIR2P33890 tT(AGU)I2tT(AGU)I2 73 nt0.49□□□□□ -2.33
TIR2P33890 tT(AGU)JtT(AGU)J 73 nt0.49□□□□□ -2.33
TIR2P33890 tT(AGU)N1tT(AGU)N1 73 nt0.49□□□□□ -2.33
TIR2P33890 tT(AGU)N2tT(AGU)N2 73 nt0.49□□□□□ -2.33
TIR2P33890 tT(AGU)O1tT(AGU)O1 73 nt0.49□□□□□ -2.33
TIR2P33890 tT(AGU)O2tT(AGU)O2 73 nt0.49□□□□□ -2.33
TIR2P33890 YOR192C-BYOR192C-B 5313 nt0.48□□□□□ -2.33
TIR2P33890 YHR131W-AYHR131W-A 246 nt0.47□□□□□ -2.33
TIR2P33890 YIL002W-AYIL002W-A 210 nt0.47□□□□□ -2.33
TIR2P33890 YSP1YHR155W 3687 nt0.46□□□□□ -2.34
TIR2P33890 YCR038W-AYCR038W-A 126 nt0.46□□□□□ -2.34
TIR2P33890 PAU12YGR294W 363 nt0.46□□□□□ -2.34
TIR2P33890 YOL155W-AYOL155W-A 135 nt0.46□□□□□ -2.34
TIR2P33890 YDR366CYDR366C 399 nt0.45□□□□□ -2.34
TIR2P33890 SBH1YER087C-B 249 nt0.45□□□□□ -2.34
TIR2P33890 YIL142C-AYIL142C-A 333 nt0.45□□□□□ -2.34
TIR2P33890 NNF2YGR089W 2811 nt0.45□□□□□ -2.34
TIR2P33890 SNU13YEL026W 381 nt0.44□□□□□ -2.34
TIR2P33890 YGL041CYGL041C 204 nt0.43□□□□□ -2.34
TIR2P33890 YGL188C-AYGL188C-A 141 nt0.43□□□□□ -2.34
TIR2P33890 YML099W-AYML099W-A 330 nt0.42□□□□□ -2.34
TIR2P33890 ABF2YMR072W 552 nt0.42□□□□□ -2.34
TIR2P33890 TRS65YGR166W 1683 nt0.42□□□□□ -2.34
TIR2P33890 MLP1YKR095W 5628 nt0.41□□□□□ -2.34
TIR2P33890 APQ12YIL040W 417 nt0.41□□□□□ -2.34
TIR2P33890 UTP8YGR128C 2142 nt0.39□□□□□ -2.35
TIR2P33890 RPS26AYGL189C 360 nt0.38□□□□□ -2.35
TIR2P33890 YLL006W-AYLL006W-A 177 nt0.38□□□□□ -2.35
TIR2P33890 NIP1YMR309C 2439 nt0.38□□□□□ -2.35
TIR2P33890 YDR371C-AYDR371C-A 105 nt0.37□□□□□ -2.35
TIR2P33890 YBR131C-AYBR131C-A 90 nt0.37□□□□□ -2.35
TIR2P33890 ORC3YLL004W 1851 nt0.35□□□□□ -2.35
TIR2P33890 YMR160WYMR160W 2451 nt0.35□□□□□ -2.35
TIR2P33890 YLR232WYLR232W 348 nt0.35□□□□□ -2.35
TIR2P33890 YOR302WYOR302W 78 nt0.34□□□□□ -2.36
TIR2P33890 YBR072C-AYBR072C-A 162 nt0.34□□□□□ -2.36
TIR2P33890 BUL2YML111W 2763 nt0.34□□□□□ -2.36
TIR2P33890 snR80snR80 171 nt0.32□□□□□ -2.36
TIR2P33890 PRP39YML046W 1890 nt0.31□□□□□ -2.36
TIR2P33890 TAH1YCR060W 336 nt0.31□□□□□ -2.36
TIR2P33890 YNL097C-BYNL097C-B 123 nt0.31□□□□□ -2.36
TIR2P33890 snR8snR8 190 nt0.3□□□□□ -2.36
TIR2P33890 RCO1YMR075W 2055 nt0.29□□□□□ -2.36
TIR2P33890 IQG1YPL242C 4488 nt0.28□□□□□ -2.36
TIR2P33890 ULP2YIL031W 3105 nt0.28□□□□□ -2.37
TIR2P33890 BIR1YJR089W 2865 nt0.27□□□□□ -2.37
TIR2P33890 GLG1YKR058W 1851 nt0.27□□□□□ -2.37
TIR2P33890 YDR544CYDR544C 429 nt0.26□□□□□ -2.37
TIR2P33890 YEL014CYEL014C 306 nt0.26□□□□□ -2.37
TIR2P33890 YJL182CYJL182C 318 nt0.26□□□□□ -2.37
TIR2P33890 YBL039C-AYBL039C-A 84 nt0.26□□□□□ -2.37
TIR2P33890 SDH6YDR379C-A 240 nt0.25□□□□□ -2.37
TIR2P33890 YBL100W-BYBL100W-B 5313 nt0.24□□□□□ -2.37
TIR2P33890 YGL182CYGL182C 324 nt0.24□□□□□ -2.37
TIR2P33890 YMR158W-BYMR158W-B 321 nt0.24□□□□□ -2.37
TIR2P33890 YOR186C-AYOR186C-A 210 nt0.24□□□□□ -2.37
TIR2P33890 MLP2YIL149C 5040 nt0.23□□□□□ -2.37
TIR2P33890 YOL013W-AYOL013W-A 192 nt0.23□□□□□ -2.37
TIR2P33890 MYO1YHR023W 5787 nt0.22□□□□□ -2.37
TIR2P33890 YEL073CYEL073C 324 nt0.22□□□□□ -2.37
TIR2P33890 YKL145W-AYKL145W-A 93 nt0.22□□□□□ -2.37
TIR2P33890 COG6YNL041C 2520 nt0.22□□□□□ -2.37
TIR2P33890 STF2YGR008C 255 nt0.21□□□□□ -2.38
TIR2P33890 ESP1YGR098C 4893 nt0.2□□□□□ -2.38
TIR2P33890 CSE1YGL238W 2883 nt0.19□□□□□ -2.38
TIR2P33890 FMP27YLR454W 7887 nt0.17□□□□□ -2.38
TIR2P33890 YOR314W-AYOR314W-A 111 nt0.16□□□□□ -2.38
TIR2P33890 snR46snR46 197 nt0.16□□□□□ -2.38
TIR2P33890 HUG1YML058W-A 207 nt0.15□□□□□ -2.39
TIR2P33890 YOR381W-AYOR381W-A 168 nt0.15□□□□□ -2.39
TIR2P33890 RPM2YML091C 3609 nt0.15□□□□□ -2.39
TIR2P33890 YOR170WYOR170W 306 nt0.13□□□□□ -2.39
TIR2P33890 YBR099CYBR099C 384 nt0.13□□□□□ -2.39
TIR2P33890 UTP20YBL004W 7482 nt0.12□□□□□ -2.39
TIR2P33890 tF(GAA)BtF(GAA)B 73 nt0.12□□□□□ -2.39
TIR2P33890 tF(GAA)FtF(GAA)F 73 nt0.12□□□□□ -2.39
TIR2P33890 tF(GAA)GtF(GAA)G 73 nt0.12□□□□□ -2.39
TIR2P33890 tF(GAA)H1tF(GAA)H1 73 nt0.12□□□□□ -2.39
TIR2P33890 tF(GAA)H2tF(GAA)H2 73 nt0.12□□□□□ -2.39
TIR2P33890 tF(GAA)MtF(GAA)M 73 nt0.12□□□□□ -2.39
TIR2P33890 tF(GAA)P1tF(GAA)P1 73 nt0.12□□□□□ -2.39
TIR2P33890 tF(GAA)P2tF(GAA)P2 73 nt0.12□□□□□ -2.39
TIR2P33890 snR52snR52 92 nt0.12□□□□□ -2.39
TIR2P33890 AI1Q0050 2505 nt0.11□□□□□ -2.39
TIR2P33890 YLR342W-AYLR342W-A 174 nt0.09□□□□□ -2.4
TIR2P33890 SOV1YMR066W 2697 nt0.09□□□□□ -2.4
TIR2P33890 YNL054W-BYNL054W-B 5250 nt0.08□□□□□ -2.4
TIR2P33890 YDR406W-AYDR406W-A 246 nt0.08□□□□□ -2.4
TIR2P33890 tM(CAU)Q2tM(CAU)Q2 78 nt0.07□□□□□ -2.4
TIR2P33890 YDR210WYDR210W 228 nt0.06□□□□□ -2.4
TIR2P33890 EST1YLR233C 2100 nt0.03□□□□□ -2.4
TIR2P33890 YMR046W-AYMR046W-A 129 nt0.02□□□□□ -2.41
TIR2P33890 YOL014WYOL014W 375 nt0.02□□□□□ -2.41
TIR2P33890 SPG3YDR504C 384 nt0.01□□□□□ -2.41
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms