Protein–RNA interactions for Protein: P29539

RIF1, Telomere length regulator protein RIF1, yeastyeast

Predictions only

Length 1,916 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIF1P29539 tT(UGU)G2tT(UGU)G2 72 nt-0.43□□□□□ -2.48
RIF1P29539 tT(UGU)PtT(UGU)P 72 nt-0.43□□□□□ -2.48
RIF1P29539 YLL019W-AYLL019W-A 93 nt-0.43□□□□□ -2.48
RIF1P29539 VPS20YMR077C 666 nt-0.43□□□□□ -2.48
RIF1P29539 YPL205CYPL205C 345 nt-0.44□□□□□ -2.48
RIF1P29539 AGA2YGL032C 264 nt-0.46□□□□□ -2.48
RIF1P29539 YFL063WYFL063W 456 nt-0.46□□□□□ -2.48
RIF1P29539 RPM2YML091C 3609 nt-0.47□□□□□ -2.48
RIF1P29539 YLR434CYLR434C 384 nt-0.47□□□□□ -2.48
RIF1P29539 PRM3YPL192C 402 nt-0.47□□□□□ -2.48
RIF1P29539 SDH6YDR379C-A 240 nt-0.48□□□□□ -2.49
RIF1P29539 YMR001C-AYMR001C-A 231 nt-0.48□□□□□ -2.49
RIF1P29539 YBR223W-AYBR223W-A 120 nt-0.48□□□□□ -2.49
RIF1P29539 EST1YLR233C 2100 nt-0.49□□□□□ -2.49
RIF1P29539 YIL071W-AYIL071W-A 477 nt-0.5□□□□□ -2.49
RIF1P29539 YGR069WYGR069W 336 nt-0.51□□□□□ -2.49
RIF1P29539 YNL067W-BYNL067W-B 141 nt-0.52□□□□□ -2.49
RIF1P29539 YER053C-AYER053C-A 114 nt-0.52□□□□□ -2.49
RIF1P29539 YJL197C-AYJL197C-A 282 nt-0.53□□□□□ -2.49
RIF1P29539 YCR038W-AYCR038W-A 126 nt-0.54□□□□□ -2.5
RIF1P29539 YPR016W-AYPR016W-A 261 nt-0.54□□□□□ -2.5
RIF1P29539 YEL050W-AYEL050W-A 192 nt-0.54□□□□□ -2.5
RIF1P29539 YIL002W-AYIL002W-A 210 nt-0.55□□□□□ -2.5
RIF1P29539 YOR161W-AYOR161W-A 81 nt-0.55□□□□□ -2.5
RIF1P29539 snR33snR33 183 nt-0.55□□□□□ -2.5
RIF1P29539 YMR193C-AYMR193C-A 387 nt-0.56□□□□□ -2.5
RIF1P29539 YPR010C-AYPR010C-A 219 nt-0.56□□□□□ -2.5
RIF1P29539 tA(UGC)QtA(UGC)Q 76 nt-0.56□□□□□ -2.5
RIF1P29539 CSN9YDR179C 489 nt-0.58□□□□□ -2.5
RIF1P29539 YOR072W-BYOR072W-B 162 nt-0.58□□□□□ -2.5
RIF1P29539 YLR202CYLR202C 327 nt-0.6□□□□□ -2.5
RIF1P29539 YBR285WYBR285W 435 nt-0.6□□□□□ -2.51
RIF1P29539 YGL149WYGL149W 306 nt-0.62□□□□□ -2.51
RIF1P29539 YML100W-AYML100W-A 174 nt-0.62□□□□□ -2.51
RIF1P29539 YER137W-AYER137W-A 306 nt-0.64□□□□□ -2.51
RIF1P29539 PAU9YBL108C-A 129 nt-0.64□□□□□ -2.51
RIF1P29539 snR60snR60 104 nt-0.65□□□□□ -2.51
RIF1P29539 YDL158CYDL158C 309 nt-0.66□□□□□ -2.51
RIF1P29539 YNL028WYNL028W 318 nt-0.67□□□□□ -2.52
RIF1P29539 YOR121CYOR121C 306 nt-0.67□□□□□ -2.52
RIF1P29539 tW(UCA)QtW(UCA)Q 74 nt-0.69□□□□□ -2.52
RIF1P29539 YDR048CYDR048C 315 nt-0.7□□□□□ -2.52
RIF1P29539 YLR264C-AYLR264C-A 117 nt-0.7□□□□□ -2.52
RIF1P29539 YAL068W-AYAL068W-A 255 nt-0.7□□□□□ -2.52
RIF1P29539 BIL1YOR304C-A 231 nt-0.7□□□□□ -2.52
RIF1P29539 APQ12YIL040W 417 nt-0.71□□□□□ -2.52
RIF1P29539 snR36snR36 182 nt-0.72□□□□□ -2.52
RIF1P29539 YAL063C-AYAL063C-A 291 nt-0.72□□□□□ -2.53
RIF1P29539 COG6YNL041C 2520 nt-0.73□□□□□ -2.53
RIF1P29539 YER079WYER079W 633 nt-0.74□□□□□ -2.53
RIF1P29539 YDR544CYDR544C 429 nt-0.75□□□□□ -2.53
RIF1P29539 ATP19YOL077W-A 207 nt-0.76□□□□□ -2.53
RIF1P29539 HMRA1YCR097W 381 nt-0.77□□□□□ -2.53
RIF1P29539 YGL182CYGL182C 324 nt-0.77□□□□□ -2.53
RIF1P29539 YGR035CYGR035C 351 nt-0.77□□□□□ -2.53
RIF1P29539 YJR157WYJR157W 363 nt-0.77□□□□□ -2.53
RIF1P29539 YOR293C-AYOR293C-A 150 nt-0.78□□□□□ -2.53
RIF1P29539 HTL1YCR020W-B 237 nt-0.79□□□□□ -2.54
RIF1P29539 YNL324WYNL324W 396 nt-0.79□□□□□ -2.54
RIF1P29539 YAL016C-BYAL016C-B 186 nt-0.79□□□□□ -2.54
RIF1P29539 YOR314W-AYOR314W-A 111 nt-0.79□□□□□ -2.54
RIF1P29539 YDR102CYDR102C 333 nt-0.83□□□□□ -2.54
RIF1P29539 YOR015WYOR015W 360 nt-0.83□□□□□ -2.54
RIF1P29539 YDL007C-AYDL007C-A 258 nt-0.84□□□□□ -2.54
RIF1P29539 ATP6Q0085 780 nt-0.84□□□□□ -2.54
RIF1P29539 snR161snR161 161 nt-0.84□□□□□ -2.54
RIF1P29539 YBR182C-AYBR182C-A 195 nt-0.85□□□□□ -2.55
RIF1P29539 YIL032CYIL032C 357 nt-0.86□□□□□ -2.55
RIF1P29539 YBL039C-AYBL039C-A 84 nt-0.88□□□□□ -2.55
RIF1P29539 YAF9YNL107W 681 nt-0.88□□□□□ -2.55
RIF1P29539 snR189snR189 189 nt-0.88□□□□□ -2.55
RIF1P29539 YDR183C-AYDR183C-A 258 nt-0.89□□□□□ -2.55
RIF1P29539 YMR172C-AYMR172C-A 384 nt-0.89□□□□□ -2.55
RIF1P29539 snR74snR74 88 nt-0.89□□□□□ -2.55
RIF1P29539 YLR120W-AYLR120W-A 102 nt-0.89□□□□□ -2.55
RIF1P29539 Q0017Q0017 162 nt-0.9□□□□□ -2.55
RIF1P29539 YGL052WYGL052W 306 nt-0.91□□□□□ -2.55
RIF1P29539 YOR008C-AYOR008C-A 225 nt-0.91□□□□□ -2.56
RIF1P29539 YER090C-AYER090C-A 90 nt-0.92□□□□□ -2.56
RIF1P29539 YPR197CYPR197C 564 nt-0.92□□□□□ -2.56
RIF1P29539 YDR157WYDR157W 402 nt-0.93□□□□□ -2.56
RIF1P29539 snR49snR49 165 nt-0.93□□□□□ -2.56
RIF1P29539 YKL118WYKL118W 312 nt-0.93□□□□□ -2.56
RIF1P29539 YJL077W-AYJL077W-A 87 nt-0.94□□□□□ -2.56
RIF1P29539 YFL032WYFL032W 321 nt-0.95□□□□□ -2.56
RIF1P29539 YDR413CYDR413C 576 nt-0.98□□□□□ -2.57
RIF1P29539 YLR154W-FYLR154W-F 141 nt-0.98□□□□□ -2.57
RIF1P29539 YJL182CYJL182C 318 nt-0.99□□□□□ -2.57
RIF1P29539 YER181CYER181C 324 nt-1.02□□□□□ -2.57
RIF1P29539 tQ(UUG)QtQ(UUG)Q 76 nt-1.03□□□□□ -2.57
RIF1P29539 YNL266WYNL266W 420 nt-1.03□□□□□ -2.57
RIF1P29539 YER097WYER097W 330 nt-1.03□□□□□ -2.57
RIF1P29539 YFL019CYFL019C 354 nt-1.04□□□□□ -2.58
RIF1P29539 YEL014CYEL014C 306 nt-1.06□□□□□ -2.58
RIF1P29539 YGR146C-AYGR146C-A 162 nt-1.1□□□□□ -2.59
RIF1P29539 RDS3YPR094W 324 nt-1.1□□□□□ -2.59
RIF1P29539 YOR170WYOR170W 306 nt-1.12□□□□□ -2.59
RIF1P29539 YPL038W-AYPL038W-A 192 nt-1.13□□□□□ -2.59
RIF1P29539 YDL240C-AYDL240C-A 138 nt-1.13□□□□□ -2.59
RIF1P29539 YOR329W-AYOR329W-A 210 nt-1.13□□□□□ -2.59
Retrieved 100 of 7,029 protein–RNA pairs in 52.8 ms