Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MMP11P24347 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
MMP11P24347 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MMP11P24347 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
MMP11P24347 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.97■□□□□ 0.63
MMP11P24347 UBE2SP1-201ENST00000450587 669 ntBASIC18.97■□□□□ 0.63
MMP11P24347 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.97■□□□□ 0.63
MMP11P24347 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.97■□□□□ 0.63
MMP11P24347 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.97■□□□□ 0.63
MMP11P24347 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.97■□□□□ 0.63
MMP11P24347 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MMP11P24347 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MMP11P24347 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.97■□□□□ 0.63
MMP11P24347 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
MMP11P24347 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MMP11P24347 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MMP11P24347 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MMP11P24347 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
MMP11P24347 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
MMP11P24347 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MMP11P24347 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.96■□□□□ 0.63
MMP11P24347 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MMP11P24347 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
MMP11P24347 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MMP11P24347 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
MMP11P24347 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MMP11P24347 RPPH1-201ENST00000516869 333 ntBASIC18.96■□□□□ 0.63
MMP11P24347 C1QBPP2-201ENST00000528754 825 ntBASIC18.96■□□□□ 0.63
MMP11P24347 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MMP11P24347 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.96■□□□□ 0.63
MMP11P24347 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MMP11P24347 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MMP11P24347 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MMP11P24347 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
MMP11P24347 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MMP11P24347 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MMP11P24347 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MMP11P24347 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MMP11P24347 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
MMP11P24347 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP11P24347 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP11P24347 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
MMP11P24347 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MMP11P24347 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP11P24347 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.95■□□□□ 0.62
MMP11P24347 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP11P24347 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.95■□□□□ 0.62
MMP11P24347 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP11P24347 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP11P24347 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP11P24347 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
MMP11P24347 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.95■□□□□ 0.62
MMP11P24347 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
MMP11P24347 AL390719.1-204ENST00000412397 1219 ntBASIC18.95■□□□□ 0.62
MMP11P24347 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.95■□□□□ 0.62
MMP11P24347 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
MMP11P24347 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.95■□□□□ 0.62
MMP11P24347 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.95■□□□□ 0.62
MMP11P24347 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.95■□□□□ 0.62
MMP11P24347 AC233263.1-201ENST00000578059 224 ntBASIC18.95■□□□□ 0.62
MMP11P24347 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
MMP11P24347 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
MMP11P24347 AC020907.5-201ENST00000624372 1936 ntBASIC18.95■□□□□ 0.62
MMP11P24347 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.95■□□□□ 0.62
MMP11P24347 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.95■□□□□ 0.62
MMP11P24347 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP11P24347 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MMP11P24347 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.95■□□□□ 0.62
MMP11P24347 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
MMP11P24347 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MMP11P24347 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP11P24347 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
MMP11P24347 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP11P24347 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP11P24347 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP11P24347 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP11P24347 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
MMP11P24347 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
MMP11P24347 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP11P24347 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
MMP11P24347 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP11P24347 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP11P24347 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.94■□□□□ 0.62
MMP11P24347 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.94■□□□□ 0.62
MMP11P24347 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
MMP11P24347 FAM197Y4-202ENST00000622692 608 ntBASIC18.94■□□□□ 0.62
MMP11P24347 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.94■□□□□ 0.62
MMP11P24347 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
MMP11P24347 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
MMP11P24347 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP11P24347 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.94■□□□□ 0.62
MMP11P24347 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.94■□□□□ 0.62
MMP11P24347 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
MMP11P24347 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
MMP11P24347 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.94■□□□□ 0.62
MMP11P24347 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
MMP11P24347 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
MMP11P24347 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.93■□□□□ 0.62
MMP11P24347 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MMP11P24347 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms