Protein–RNA interactions for Protein: P23615

SPT6, Transcription elongation factor SPT6, yeastyeast

Known RBP Predictions only

Length 1,451 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPT6P23615 YDR220CYDR220C 294 nt-3.56□□□□□ -2.98
SPT6P23615 YOR121CYOR121C 306 nt-3.56□□□□□ -2.98
SPT6P23615 YJR162CYJR162C 351 nt-3.57□□□□□ -2.98
SPT6P23615 YNL337WYNL337W 255 nt-3.57□□□□□ -2.98
SPT6P23615 ATP19YOL077W-A 207 nt-3.58□□□□□ -2.98
SPT6P23615 YNL303WYNL303W 348 nt-3.59□□□□□ -2.98
SPT6P23615 YJR087WYJR087W 351 nt-3.61□□□□□ -2.99
SPT6P23615 BUD26YDR241W 288 nt-3.62□□□□□ -2.99
SPT6P23615 YMR193C-AYMR193C-A 387 nt-3.64□□□□□ -2.99
SPT6P23615 CSE2YNR010W 450 nt-3.64□□□□□ -2.99
SPT6P23615 YOR309CYOR309C 381 nt-3.65□□□□□ -2.99
SPT6P23615 YDR354C-AYDR354C-A 144 nt-3.66□□□□□ -2.99
SPT6P23615 YMR013C-AYMR013C-A 150 nt-3.66□□□□□ -2.99
SPT6P23615 YLR334CYLR334C 381 nt-3.67□□□□□ -3
SPT6P23615 YLR456WYLR456W 615 nt-3.67□□□□□ -3
SPT6P23615 POP6YGR030C 477 nt-3.69□□□□□ -3
SPT6P23615 YHR050W-AYHR050W-A 171 nt-3.7□□□□□ -3
SPT6P23615 YPR039WYPR039W 336 nt-3.71□□□□□ -3
SPT6P23615 YHR007C-AYHR007C-A 216 nt-3.73□□□□□ -3.01
SPT6P23615 RPS30AYLR287C-A 192 nt-3.73□□□□□ -3.01
SPT6P23615 YLR202CYLR202C 327 nt-3.75□□□□□ -3.01
SPT6P23615 YEL020C-BYEL020C-B 198 nt-3.78□□□□□ -3.01
SPT6P23615 YKL083WYKL083W 615 nt-3.78□□□□□ -3.01
SPT6P23615 BI2Q0110 1272 nt-3.79□□□□□ -3.02
SPT6P23615 YIL029CYIL029C 429 nt-3.79□□□□□ -3.02
SPT6P23615 YPR002C-AYPR002C-A 198 nt-3.79□□□□□ -3.02
SPT6P23615 MRPL32YCR003W 552 nt-3.8□□□□□ -3.02
SPT6P23615 tQ(UUG)QtQ(UUG)Q 76 nt-3.81□□□□□ -3.02
SPT6P23615 YMR172C-AYMR172C-A 384 nt-3.82□□□□□ -3.02
SPT6P23615 YAF9YNL107W 681 nt-3.82□□□□□ -3.02
SPT6P23615 YML054C-AYML054C-A 159 nt-3.83□□□□□ -3.02
SPT6P23615 YOL083C-AYOL083C-A 141 nt-3.83□□□□□ -3.02
SPT6P23615 IRC13YOR235W 315 nt-3.84□□□□□ -3.02
SPT6P23615 YNL266WYNL266W 420 nt-3.86□□□□□ -3.03
SPT6P23615 YFL012WYFL012W 447 nt-3.86□□□□□ -3.03
SPT6P23615 YER090C-AYER090C-A 90 nt-3.87□□□□□ -3.03
SPT6P23615 YDR048CYDR048C 315 nt-3.9□□□□□ -3.03
SPT6P23615 snR50snR50 90 nt-3.98□□□□□ -3.05
SPT6P23615 YLR163W-AYLR163W-A 114 nt-4□□□□□ -3.05
SPT6P23615 YDR426CYDR426C 378 nt-4.03□□□□□ -3.05
SPT6P23615 PRM3YPL192C 402 nt-4.03□□□□□ -3.05
SPT6P23615 YDL011CYDL011C 324 nt-4.05□□□□□ -3.06
SPT6P23615 YDR524W-CYDR524W-C 90 nt-4.07□□□□□ -3.06
SPT6P23615 snR57snR57 88 nt-4.09□□□□□ -3.06
SPT6P23615 GPI15YNL038W 690 nt-4.09□□□□□ -3.06
SPT6P23615 YGR270C-AYGR270C-A 219 nt-4.13□□□□□ -3.07
SPT6P23615 TOM22YNL131W 459 nt-4.13□□□□□ -3.07
SPT6P23615 AI5_BETAQ0075 1065 nt-4.15□□□□□ -3.07
SPT6P23615 YDR544CYDR544C 429 nt-4.18□□□□□ -3.08
SPT6P23615 YLR269CYLR269C 351 nt-4.18□□□□□ -3.08
SPT6P23615 snR67snR67 82 nt-4.27□□□□□ -3.09
SPT6P23615 PCC1YKR095W-A 267 nt-4.29□□□□□ -3.1
SPT6P23615 snR69snR69 101 nt-4.3□□□□□ -3.1
SPT6P23615 YOR314W-AYOR314W-A 111 nt-4.33□□□□□ -3.1
SPT6P23615 YOR008C-AYOR008C-A 225 nt-4.34□□□□□ -3.1
SPT6P23615 TSC3YBR058C-A 243 nt-4.34□□□□□ -3.1
SPT6P23615 YGR069WYGR069W 336 nt-4.35□□□□□ -3.11
SPT6P23615 YML099W-AYML099W-A 330 nt-4.39□□□□□ -3.11
SPT6P23615 YBL071CYBL071C 309 nt-4.43□□□□□ -3.12
SPT6P23615 YLR217WYLR217W 324 nt-4.43□□□□□ -3.12
SPT6P23615 YBR182C-AYBR182C-A 195 nt-4.46□□□□□ -3.12
SPT6P23615 YER175W-AYER175W-A 165 nt-4.51□□□□□ -3.13
SPT6P23615 YGR174W-AYGR174W-A 87 nt-4.52□□□□□ -3.13
SPT6P23615 YLR342W-AYLR342W-A 174 nt-4.52□□□□□ -3.13
SPT6P23615 snR9snR9 187 nt-4.53□□□□□ -3.13
SPT6P23615 YDR102CYDR102C 333 nt-4.54□□□□□ -3.14
SPT6P23615 YDR524C-AYDR524C-A 120 nt-4.56□□□□□ -3.14
SPT6P23615 YGL149WYGL149W 306 nt-4.56□□□□□ -3.14
SPT6P23615 ATG16YMR159C 453 nt-4.57□□□□□ -3.14
SPT6P23615 YLL019W-AYLL019W-A 93 nt-4.61□□□□□ -3.15
SPT6P23615 YDL016CYDL016C 303 nt-4.62□□□□□ -3.15
SPT6P23615 HMRA1YCR097W 381 nt-4.62□□□□□ -3.15
SPT6P23615 YJL197C-AYJL197C-A 282 nt-4.63□□□□□ -3.15
SPT6P23615 YOR376W-AYOR376W-A 156 nt-4.65□□□□□ -3.15
SPT6P23615 YER137W-AYER137W-A 306 nt-4.73□□□□□ -3.17
SPT6P23615 STE18YJR086W 333 nt-4.77□□□□□ -3.17
SPT6P23615 YNL198CYNL198C 303 nt-4.84□□□□□ -3.18
SPT6P23615 YDL158CYDL158C 309 nt-4.87□□□□□ -3.19
SPT6P23615 YAR047CYAR047C 321 nt-4.88□□□□□ -3.19
SPT6P23615 YER181CYER181C 324 nt-4.94□□□□□ -3.2
SPT6P23615 YLR286W-AYLR286W-A 135 nt-4.95□□□□□ -3.2
SPT6P23615 YER097WYER097W 330 nt-4.97□□□□□ -3.21
SPT6P23615 YOL038C-AYOL038C-A 96 nt-4.99□□□□□ -3.21
SPT6P23615 YPR197CYPR197C 564 nt-4.99□□□□□ -3.21
SPT6P23615 tD(GUC)QtD(GUC)Q 75 nt-5□□□□□ -3.21
SPT6P23615 YOR072W-BYOR072W-B 162 nt-5□□□□□ -3.21
SPT6P23615 YIL115W-AYIL115W-A 372 nt-5.01□□□□□ -3.21
SPT6P23615 YOL155W-AYOL155W-A 135 nt-5.01□□□□□ -3.21
SPT6P23615 YOR316C-AYOR316C-A 210 nt-5.02□□□□□ -3.21
SPT6P23615 snR6snR6 112 nt-5.03□□□□□ -3.21
SPT6P23615 BIL1YOR304C-A 231 nt-5.08□□□□□ -3.22
SPT6P23615 YGR146C-AYGR146C-A 162 nt-5.09□□□□□ -3.22
SPT6P23615 YDL159C-BYDL159C-B 177 nt-5.17□□□□□ -3.24
SPT6P23615 YBR196C-AYBR196C-A 150 nt-5.22□□□□□ -3.25
SPT6P23615 snR73snR73 106 nt-5.23□□□□□ -3.25
SPT6P23615 snR55snR55 98 nt-5.27□□□□□ -3.25
SPT6P23615 CSN9YDR179C 489 nt-5.27□□□□□ -3.25
SPT6P23615 MPC1YGL080W 393 nt-5.27□□□□□ -3.25
SPT6P23615 tM(CAU)Q2tM(CAU)Q2 78 nt-5.27□□□□□ -3.25
SPT6P23615 YPR012WYPR012W 255 nt-5.27□□□□□ -3.25
Retrieved 100 of 7,029 protein–RNA pairs in 21.2 ms