Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV25A0A0B4J276 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV25A0A0B4J276 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC15.03■□□□□ -0
TRAV25A0A0B4J276 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TRAV25A0A0B4J276 POM121L13P-201ENST00000422362 380 ntBASIC15.03■□□□□ -0
TRAV25A0A0B4J276 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC15.03■□□□□ -0
TRAV25A0A0B4J276 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TRAV25A0A0B4J276 ADM-205ENST00000528544 586 ntTSL 2 BASIC15.03■□□□□ -0
TRAV25A0A0B4J276 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC15.03■□□□□ -0
TRAV25A0A0B4J276 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV25A0A0B4J276 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV25A0A0B4J276 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV25A0A0B4J276 AP005212.1-201ENST00000581547 1997 ntBASIC15.03■□□□□ -0
TRAV25A0A0B4J276 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV25A0A0B4J276 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
TRAV25A0A0B4J276 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV25A0A0B4J276 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV25A0A0B4J276 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV25A0A0B4J276 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV25A0A0B4J276 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV25A0A0B4J276 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV25A0A0B4J276 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV25A0A0B4J276 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV25A0A0B4J276 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV25A0A0B4J276 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV25A0A0B4J276 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC15.02■□□□□ -0
TRAV25A0A0B4J276 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC15.02■□□□□ -0
TRAV25A0A0B4J276 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC15.02■□□□□ -0
TRAV25A0A0B4J276 AC006557.6-201ENST00000623071 864 ntBASIC15.02■□□□□ -0
TRAV25A0A0B4J276 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV25A0A0B4J276 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV25A0A0B4J276 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC15.02□□□□□ -0.01
TRAV25A0A0B4J276 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC15.02□□□□□ -0.01
TRAV25A0A0B4J276 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV25A0A0B4J276 FEM1AP1-201ENST00000431297 1995 ntBASIC15.02□□□□□ -0.01
TRAV25A0A0B4J276 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC15.02□□□□□ -0.01
TRAV25A0A0B4J276 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV25A0A0B4J276 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV25A0A0B4J276 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV25A0A0B4J276 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV25A0A0B4J276 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV25A0A0B4J276 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV25A0A0B4J276 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TRAV25A0A0B4J276 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV25A0A0B4J276 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV25A0A0B4J276 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAV25A0A0B4J276 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV25A0A0B4J276 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
TRAV25A0A0B4J276 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV25A0A0B4J276 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV25A0A0B4J276 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV25A0A0B4J276 AC008403.3-201ENST00000598924 454 ntBASIC15.01□□□□□ -0.01
TRAV25A0A0B4J276 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC15.01□□□□□ -0.01
TRAV25A0A0B4J276 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV25A0A0B4J276 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV25A0A0B4J276 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TRAV25A0A0B4J276 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV25A0A0B4J276 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV25A0A0B4J276 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV25A0A0B4J276 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV25A0A0B4J276 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TRAV25A0A0B4J276 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV25A0A0B4J276 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV25A0A0B4J276 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAV25A0A0B4J276 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV25A0A0B4J276 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TRAV25A0A0B4J276 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC15□□□□□ -0.01
TRAV25A0A0B4J276 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15□□□□□ -0.01
TRAV25A0A0B4J276 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV25A0A0B4J276 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV25A0A0B4J276 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV25A0A0B4J276 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TRAV25A0A0B4J276 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV25A0A0B4J276 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV25A0A0B4J276 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC15□□□□□ -0.01
TRAV25A0A0B4J276 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC15□□□□□ -0.01
TRAV25A0A0B4J276 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV25A0A0B4J276 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TRAV25A0A0B4J276 HES2-206ENST00000489730 730 ntTSL 2 BASIC15□□□□□ -0.01
TRAV25A0A0B4J276 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC15□□□□□ -0.01
TRAV25A0A0B4J276 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC15□□□□□ -0.01
TRAV25A0A0B4J276 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC15□□□□□ -0.01
TRAV25A0A0B4J276 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC15□□□□□ -0.01
TRAV25A0A0B4J276 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC15□□□□□ -0.01
TRAV25A0A0B4J276 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TRAV25A0A0B4J276 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV25A0A0B4J276 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV25A0A0B4J276 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC15□□□□□ -0.01
TRAV25A0A0B4J276 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TRAV25A0A0B4J276 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC15□□□□□ -0.01
TRAV25A0A0B4J276 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV25A0A0B4J276 CD37-204ENST00000535669 1674 ntTSL 2 BASIC15□□□□□ -0.01
TRAV25A0A0B4J276 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TRAV25A0A0B4J276 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TRAV25A0A0B4J276 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
TRAV25A0A0B4J276 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV25A0A0B4J276 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TRAV25A0A0B4J276 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TRAV25A0A0B4J276 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV25A0A0B4J276 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms