Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 SSR3-206ENST00000476217 807 ntTSL 3 BASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 RN7SL314P-201ENST00000490735 292 ntBASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 AC112219.1-201ENST00000491567 947 ntTSL 3 BASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 AC069306.1-201ENST00000507006 843 ntBASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 AC138866.1-201ENST00000514522 497 ntBASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 ADI1P2-201ENST00000514945 429 ntBASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 NRON-201ENST00000517270 370 ntBASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 AC011726.3-201ENST00000518031 568 ntTSL 4 BASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 AC044839.1-209ENST00000529769 878 ntTSL 5 BASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 PRR13-205ENST00000549068 755 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 NUTF2P2-201ENST00000551207 384 ntBASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 AC079313.2-202ENST00000552053 511 ntTSL 3 BASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 AC010735.1-201ENST00000567305 1026 ntBASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 AC124283.2-201ENST00000575085 318 ntTSL 3 BASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 RN7SL311P-201ENST00000579858 306 ntBASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 AC093484.4-201ENST00000583934 461 ntTSL 5 BASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 AC011472.3-201ENST00000586051 906 ntTSL 3 BASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 RIT2-202ENST00000589109 1156 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 AL589765.6-201ENST00000601909 549 ntBASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 AC064872.1-201ENST00000604823 1072 ntBASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 AC104117.5-201ENST00000606195 547 ntBASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 7SK.12-201ENST00000612820 244 ntBASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 AL137246.2-201ENST00000613439 662 ntBASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 AC010320.5-201ENST00000619124 676 ntBASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 MTRF1-203ENST00000379480 2185 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 PIWIL2-205ENST00000611073 2864 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 IL31RA-205ENST00000396836 2426 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 CAP1-201ENST00000340450 2592 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 THAP12P1-201ENST00000398672 2203 ntBASIC6.56□□□□□ -1.36
SSBP3Q9BWW4 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 NAA11-201ENST00000286794 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 ETS1-204ENST00000526145 3389 ntTSL 5 BASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 MYO6-207ENST00000615563 4026 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 REG4-203ENST00000369401 2327 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 AOAH-208ENST00000612871 2336 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 AC092999.1-201ENST00000624004 1924 ntBASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 BCL6-201ENST00000232014 2710 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 OR6M2P-202ENST00000641780 2063 ntBASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 RNA5SP301-201ENST00000362537 121 ntBASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 RNA5SP463-201ENST00000363030 120 ntBASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 RNA5SP149-201ENST00000364952 92 ntBASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 RNA5SP297-201ENST00000391029 113 ntBASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 CSE1L-AS1-201ENST00000417781 556 ntTSL 2 BASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 OFD1P11Y-201ENST00000418213 1177 ntBASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 GAPDHP46-201ENST00000424043 994 ntBASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 AL353706.1-201ENST00000436728 494 ntBASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 AL606490.8-201ENST00000441624 319 ntBASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 AL136454.1-201ENST00000443181 466 ntBASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 VN1R25P-201ENST00000443385 738 ntBASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 MTND2P4-201ENST00000445034 1004 ntBASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 AC093157.1-205ENST00000449473 1298 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 AL161937.1-202ENST00000451960 341 ntTSL 3 BASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 AL451074.1-202ENST00000453762 989 ntBASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 TNR-IT1-201ENST00000455447 630 ntTSL 3 BASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 RPL10P6-201ENST00000457497 318 ntBASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 RPL7AP56-201ENST00000476420 791 ntBASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 SYT14P1-201ENST00000481459 721 ntBASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 DLX5-202ENST00000486603 1074 ntTSL 2 BASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 RN7SL124P-201ENST00000498656 285 ntBASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 AK6-203ENST00000502819 743 ntTSL 5 BASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 SUMO2P5-201ENST00000506790 245 ntBASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 NAT2-202ENST00000520116 716 ntTSL 3 BASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 AP001636.1-201ENST00000531997 1122 ntBASIC6.55□□□□□ -1.36
SSBP3Q9BWW4 LRRC6P1-201ENST00000532188 885 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms