Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC4.93□□□□□ -1.62
RPL39P62891 VN1R66P-201ENST00000412929 916 ntBASIC4.93□□□□□ -1.62
RPL39P62891 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC4.93□□□□□ -1.62
RPL39P62891 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC4.93□□□□□ -1.62
RPL39P62891 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC4.93□□□□□ -1.62
RPL39P62891 UQCRHP1-204ENST00000424609 274 ntBASIC4.93□□□□□ -1.62
RPL39P62891 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC4.93□□□□□ -1.62
RPL39P62891 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC4.93□□□□□ -1.62
RPL39P62891 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC4.93□□□□□ -1.62
RPL39P62891 LINC01284-201ENST00000442994 730 ntTSL 5 BASIC4.93□□□□□ -1.62
RPL39P62891 AC244021.2-201ENST00000445260 529 ntTSL 5 BASIC4.93□□□□□ -1.62
RPL39P62891 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RPL39P62891 LAPTM4BP1-201ENST00000447781 690 ntBASIC4.93□□□□□ -1.62
RPL39P62891 AL135929.1-201ENST00000449287 552 ntBASIC4.93□□□□□ -1.62
RPL39P62891 RPS29P5-201ENST00000452777 171 ntBASIC4.93□□□□□ -1.62
RPL39P62891 AL590648.1-201ENST00000456479 460 ntBASIC4.93□□□□□ -1.62
RPL39P62891 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC4.93□□□□□ -1.62
RPL39P62891 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC4.93□□□□□ -1.62
RPL39P62891 AC096743.1-201ENST00000485172 319 ntBASIC4.93□□□□□ -1.62
RPL39P62891 AP005202.1-201ENST00000489915 867 ntBASIC4.93□□□□□ -1.62
RPL39P62891 AC112219.1-201ENST00000491567 947 ntTSL 3 BASIC4.93□□□□□ -1.62
RPL39P62891 RN7SL124P-201ENST00000498656 285 ntBASIC4.93□□□□□ -1.62
RPL39P62891 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC4.93□□□□□ -1.62
RPL39P62891 CENPK-208ENST00000508421 1586 ntTSL 3 BASIC4.93□□□□□ -1.62
RPL39P62891 EEF1B2P2-201ENST00000519625 676 ntBASIC4.93□□□□□ -1.62
RPL39P62891 LINC01591-202ENST00000522279 1240 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RPL39P62891 CCDC58P5-201ENST00000536923 432 ntBASIC4.93□□□□□ -1.62
RPL39P62891 LINC02413-202ENST00000552353 898 ntTSL 5 BASIC4.93□□□□□ -1.62
RPL39P62891 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC4.93□□□□□ -1.62
RPL39P62891 SPATA8-AS1-202ENST00000560888 392 ntTSL 5 BASIC4.93□□□□□ -1.62
RPL39P62891 AC073657.1-202ENST00000562063 334 ntTSL 3 BASIC4.93□□□□□ -1.62
RPL39P62891 RN7SL192P-201ENST00000584303 299 ntBASIC4.93□□□□□ -1.62
RPL39P62891 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC4.93□□□□□ -1.62
RPL39P62891 AC010719.1-201ENST00000602992 747 ntBASIC4.93□□□□□ -1.62
RPL39P62891 AC068802.1-201ENST00000603420 732 ntBASIC4.93□□□□□ -1.62
RPL39P62891 OR13Z2P-201ENST00000606338 555 ntBASIC4.93□□□□□ -1.62
RPL39P62891 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC4.93□□□□□ -1.62
RPL39P62891 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC4.93□□□□□ -1.62
RPL39P62891 AL354702.2-202ENST00000641481 890 ntBASIC4.93□□□□□ -1.62
RPL39P62891 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RPL39P62891 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
RPL39P62891 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
RPL39P62891 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RPL39P62891 C15orf41-214ENST00000569302 1325 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
RPL39P62891 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RPL39P62891 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RPL39P62891 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC4.93□□□□□ -1.62
RPL39P62891 VEZF1P1-201ENST00000423931 1541 ntBASIC4.92□□□□□ -1.62
RPL39P62891 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC4.92□□□□□ -1.62
RPL39P62891 AC022034.1-201ENST00000512867 2156 ntBASIC4.92□□□□□ -1.62
RPL39P62891 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC4.92□□□□□ -1.62
RPL39P62891 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
RPL39P62891 EEF1A1P22-201ENST00000559385 1380 ntBASIC4.92□□□□□ -1.62
RPL39P62891 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RPL39P62891 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
RPL39P62891 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC4.92□□□□□ -1.62
RPL39P62891 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
RPL39P62891 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
RPL39P62891 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RPL39P62891 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
RPL39P62891 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RPL39P62891 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RPL39P62891 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC4.92□□□□□ -1.62
RPL39P62891 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RPL39P62891 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
RPL39P62891 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RPL39P62891 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RPL39P62891 Metazoa_SRP.2-201ENST00000359385 269 ntBASIC4.92□□□□□ -1.62
RPL39P62891 RNA5SP333-201ENST00000363466 118 ntBASIC4.92□□□□□ -1.62
RPL39P62891 RNA5SP334-201ENST00000364825 118 ntBASIC4.92□□□□□ -1.62
RPL39P62891 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RPL39P62891 AC099560.1-201ENST00000412811 500 ntTSL 4 BASIC4.92□□□□□ -1.62
RPL39P62891 AC020983.1-201ENST00000417063 543 ntBASIC4.92□□□□□ -1.62
RPL39P62891 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC4.92□□□□□ -1.62
RPL39P62891 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC4.92□□□□□ -1.62
RPL39P62891 AL607028.1-201ENST00000433455 794 ntTSL 3 BASIC4.92□□□□□ -1.62
RPL39P62891 HMGN2P24-201ENST00000433516 273 ntBASIC4.92□□□□□ -1.62
RPL39P62891 SDHCP3-201ENST00000445371 506 ntBASIC4.92□□□□□ -1.62
RPL39P62891 AC096915.1-201ENST00000456185 512 ntBASIC4.92□□□□□ -1.62
RPL39P62891 RN7SL587P-201ENST00000459853 281 ntBASIC4.92□□□□□ -1.62
RPL39P62891 AC022730.2-201ENST00000465359 452 ntBASIC4.92□□□□□ -1.62
RPL39P62891 LINC02010-201ENST00000470860 516 ntTSL 4 BASIC4.92□□□□□ -1.62
RPL39P62891 LECT2-203ENST00000512872 762 ntTSL 5 BASIC4.92□□□□□ -1.62
RPL39P62891 AC073581.1-201ENST00000519036 575 ntBASIC4.92□□□□□ -1.62
RPL39P62891 AC103409.1-201ENST00000521199 564 ntTSL 5 BASIC4.92□□□□□ -1.62
RPL39P62891 AC022239.1-201ENST00000527922 435 ntTSL 5 BASIC4.92□□□□□ -1.62
RPL39P62891 AP000662.1-201ENST00000530952 487 ntBASIC4.92□□□□□ -1.62
RPL39P62891 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC4.92□□□□□ -1.62
RPL39P62891 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC4.92□□□□□ -1.62
RPL39P62891 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC4.92□□□□□ -1.62
RPL39P62891 RAP1B-230ENST00000543697 734 ntTSL 3 BASIC4.92□□□□□ -1.62
RPL39P62891 AC092375.1-201ENST00000550410 637 ntBASIC4.92□□□□□ -1.62
RPL39P62891 AC034102.7-201ENST00000550840 470 ntTSL 5 BASIC4.92□□□□□ -1.62
RPL39P62891 OR4N3P-201ENST00000559395 818 ntBASIC4.92□□□□□ -1.62
RPL39P62891 AC011840.3-201ENST00000579378 280 ntTSL 3 BASIC4.92□□□□□ -1.62
RPL39P62891 AC137695.1-201ENST00000604126 489 ntBASIC4.92□□□□□ -1.62
RPL39P62891 AL356052.1-201ENST00000605764 376 ntBASIC4.92□□□□□ -1.62
RPL39P62891 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC4.92□□□□□ -1.62
RPL39P62891 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
RPL39P62891 AC006335.3-201ENST00000613408 292 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms