Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC005618.1-201ENST00000606901 3148 ntBASIC4.95□□□□□ -1.62
RPL39P62891 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
RPL39P62891 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RPL39P62891 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RPL39P62891 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
RPL39P62891 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
RPL39P62891 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RPL39P62891 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RPL39P62891 OGFOD1P1-201ENST00000447552 1592 ntBASIC4.95□□□□□ -1.62
RPL39P62891 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RPL39P62891 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
RPL39P62891 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RPL39P62891 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RPL39P62891 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC4.95□□□□□ -1.62
RPL39P62891 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
RPL39P62891 AL391261.1-201ENST00000555712 1479 ntBASIC4.94□□□□□ -1.62
RPL39P62891 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
RPL39P62891 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC4.94□□□□□ -1.62
RPL39P62891 MTHFD1P1-201ENST00000413059 2764 ntBASIC4.94□□□□□ -1.62
RPL39P62891 AL022323.4-201ENST00000623980 13120 ntBASIC4.94□□□□□ -1.62
RPL39P62891 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC4.94□□□□□ -1.62
RPL39P62891 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC4.94□□□□□ -1.62
RPL39P62891 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC4.94□□□□□ -1.62
RPL39P62891 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RPL39P62891 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RPL39P62891 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RPL39P62891 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC4.94□□□□□ -1.62
RPL39P62891 LARP7-201ENST00000324052 2164 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RPL39P62891 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RPL39P62891 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RPL39P62891 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC4.94□□□□□ -1.62
RPL39P62891 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
RPL39P62891 ATP9B-208ENST00000586722 1650 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RPL39P62891 SPATA19-201ENST00000299140 861 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RPL39P62891 C2orf80-201ENST00000341287 1238 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RPL39P62891 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RPL39P62891 RNU6-1017P-201ENST00000363613 106 ntBASIC4.94□□□□□ -1.62
RPL39P62891 RN7SKP107-201ENST00000364157 290 ntBASIC4.94□□□□□ -1.62
RPL39P62891 RNA5SP172-201ENST00000365061 118 ntBASIC4.94□□□□□ -1.62
RPL39P62891 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC4.94□□□□□ -1.62
RPL39P62891 RN7SKP271-201ENST00000410528 320 ntBASIC4.94□□□□□ -1.62
RPL39P62891 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RPL39P62891 AC004129.1-201ENST00000417617 796 ntBASIC4.94□□□□□ -1.62
RPL39P62891 AC231533.2-201ENST00000419045 978 ntBASIC4.94□□□□□ -1.62
RPL39P62891 EIF4A1P2-201ENST00000422633 1220 ntBASIC4.94□□□□□ -1.62
RPL39P62891 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC4.94□□□□□ -1.62
RPL39P62891 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
RPL39P62891 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC4.94□□□□□ -1.62
RPL39P62891 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC4.94□□□□□ -1.62
RPL39P62891 AC245047.6-201ENST00000445444 617 ntBASIC4.94□□□□□ -1.62
RPL39P62891 OR7E62P-201ENST00000456741 477 ntBASIC4.94□□□□□ -1.62
RPL39P62891 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RPL39P62891 AC114300.1-201ENST00000502347 280 ntBASIC4.94□□□□□ -1.62
RPL39P62891 PTPN20-219ENST00000508602 742 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RPL39P62891 PTPN20-221ENST00000509599 945 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RPL39P62891 PTPN20-223ENST00000509900 693 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RPL39P62891 PTPN20-228ENST00000513266 818 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RPL39P62891 AP004607.6-201ENST00000525033 1202 ntBASIC4.94□□□□□ -1.62
RPL39P62891 DCN-207ENST00000546370 586 ntTSL 3 BASIC4.94□□□□□ -1.62
RPL39P62891 AL357093.2-202ENST00000556942 498 ntTSL 2 BASIC4.94□□□□□ -1.62
RPL39P62891 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC4.94□□□□□ -1.62
RPL39P62891 AC012181.2-201ENST00000570210 699 ntBASIC4.94□□□□□ -1.62
RPL39P62891 RN7SL376P-201ENST00000578594 264 ntBASIC4.94□□□□□ -1.62
RPL39P62891 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC4.94□□□□□ -1.62
RPL39P62891 AL137190.1-201ENST00000603288 282 ntBASIC4.94□□□□□ -1.62
RPL39P62891 AL683813.2-201ENST00000605245 502 ntBASIC4.94□□□□□ -1.62
RPL39P62891 AL080250.1-202ENST00000607221 915 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RPL39P62891 AL136304.1-201ENST00000607790 509 ntBASIC4.94□□□□□ -1.62
RPL39P62891 AL590560.2-201ENST00000608430 732 ntBASIC4.94□□□□□ -1.62
RPL39P62891 MIR6754-201ENST00000621121 66 ntBASIC4.94□□□□□ -1.62
RPL39P62891 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
RPL39P62891 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC4.94□□□□□ -1.62
RPL39P62891 PLSCR2-205ENST00000497985 1441 ntTSL 2 BASIC4.94□□□□□ -1.62
RPL39P62891 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RPL39P62891 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC4.94□□□□□ -1.62
RPL39P62891 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
RPL39P62891 DIO2-AS1-201ENST00000553979 1597 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RPL39P62891 IARS-205ENST00000443024 4341 ntTSL 5 BASIC4.94□□□□□ -1.62
RPL39P62891 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RPL39P62891 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
RPL39P62891 AC009779.8-201ENST00000641684 4384 ntBASIC4.94□□□□□ -1.62
RPL39P62891 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
RPL39P62891 NEK2P4-201ENST00000425793 1329 ntBASIC4.94□□□□□ -1.62
RPL39P62891 AL512310.3-201ENST00000547023 1335 ntBASIC4.94□□□□□ -1.62
RPL39P62891 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
RPL39P62891 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RPL39P62891 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
RPL39P62891 NUCB2-201ENST00000323688 1905 ntAPPRIS ALT1 TSL 2 BASIC4.93□□□□□ -1.62
RPL39P62891 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
RPL39P62891 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
RPL39P62891 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RPL39P62891 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RPL39P62891 C1D-202ENST00000407324 1379 ntTSL 3 BASIC4.93□□□□□ -1.62
RPL39P62891 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RPL39P62891 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC4.93□□□□□ -1.62
RPL39P62891 DDX50P1-201ENST00000438163 2400 ntBASIC4.93□□□□□ -1.62
RPL39P62891 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
RPL39P62891 MIR345-201ENST00000362114 98 ntBASIC4.93□□□□□ -1.62
RPL39P62891 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RPL39P62891 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms