Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC8.56□□□□□ -1.04
SNED1Q8TER0 AP002800.1-201ENST00000624982 2225 ntBASIC8.56□□□□□ -1.04
SNED1Q8TER0 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC8.56□□□□□ -1.04
SNED1Q8TER0 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC8.56□□□□□ -1.04
SNED1Q8TER0 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
SNED1Q8TER0 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SNED1Q8TER0 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC8.56□□□□□ -1.04
SNED1Q8TER0 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC8.56□□□□□ -1.04
SNED1Q8TER0 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
SNED1Q8TER0 FLNB-212ENST00000490882 8079 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
SNED1Q8TER0 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
SNED1Q8TER0 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC8.56□□□□□ -1.04
SNED1Q8TER0 ARNT2-207ENST00000533983 6690 ntAPPRIS ALT1 TSL 5 BASIC8.56□□□□□ -1.04
SNED1Q8TER0 GINS4-209ENST00000523277 3873 ntTSL 5 BASIC8.56□□□□□ -1.04
SNED1Q8TER0 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC8.55□□□□□ -1.04
SNED1Q8TER0 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC8.55□□□□□ -1.04
SNED1Q8TER0 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
SNED1Q8TER0 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SNED1Q8TER0 AC010132.4-201ENST00000569883 1368 ntBASIC8.55□□□□□ -1.04
SNED1Q8TER0 MRPS21P5-201ENST00000417885 231 ntBASIC8.55□□□□□ -1.04
SNED1Q8TER0 GAPDHP51-201ENST00000426454 1000 ntBASIC8.55□□□□□ -1.04
SNED1Q8TER0 NPM1P23-201ENST00000440193 849 ntBASIC8.55□□□□□ -1.04
SNED1Q8TER0 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC8.55□□□□□ -1.04
SNED1Q8TER0 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC8.55□□□□□ -1.04
SNED1Q8TER0 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC8.55□□□□□ -1.04
SNED1Q8TER0 AC026826.3-201ENST00000561747 158 ntBASIC8.55□□□□□ -1.04
SNED1Q8TER0 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC8.55□□□□□ -1.04
SNED1Q8TER0 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC8.55□□□□□ -1.04
SNED1Q8TER0 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC8.55□□□□□ -1.04
SNED1Q8TER0 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC8.55□□□□□ -1.04
SNED1Q8TER0 AC011891.2-201ENST00000604949 397 ntBASIC8.55□□□□□ -1.04
SNED1Q8TER0 OR4M2-201ENST00000614722 1133 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
SNED1Q8TER0 AC127071.2-201ENST00000623293 527 ntBASIC8.55□□□□□ -1.04
SNED1Q8TER0 PARP4-201ENST00000381989 5474 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SNED1Q8TER0 NYAP2-202ENST00000636099 5461 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
SNED1Q8TER0 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC8.55□□□□□ -1.04
SNED1Q8TER0 ARHGEF9-234ENST00000637557 4775 ntTSL 5 BASIC8.55□□□□□ -1.04
SNED1Q8TER0 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC8.55□□□□□ -1.04
SNED1Q8TER0 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
SNED1Q8TER0 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC8.55□□□□□ -1.04
SNED1Q8TER0 PHF2P2-202ENST00000444553 2865 ntBASIC8.55□□□□□ -1.04
SNED1Q8TER0 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SNED1Q8TER0 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
SNED1Q8TER0 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC8.55□□□□□ -1.04
SNED1Q8TER0 TRPM3-213ENST00000396285 4701 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
SNED1Q8TER0 NACA-216ENST00000550952 2922 ntTSL 2 BASIC8.55□□□□□ -1.04
SNED1Q8TER0 NHSL2-207ENST00000633930 13660 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
SNED1Q8TER0 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
SNED1Q8TER0 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SNED1Q8TER0 MYO1E-201ENST00000288235 8673 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SNED1Q8TER0 ZEB2-236ENST00000636471 9583 ntTSL 5 BASIC8.55□□□□□ -1.04
SNED1Q8TER0 UBXN10-201ENST00000375099 5571 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SNED1Q8TER0 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC8.55□□□□□ -1.04
SNED1Q8TER0 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SNED1Q8TER0 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC8.55□□□□□ -1.04
SNED1Q8TER0 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
SNED1Q8TER0 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SNED1Q8TER0 OR7E156P-201ENST00000400303 464 ntBASIC8.54□□□□□ -1.04
SNED1Q8TER0 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SNED1Q8TER0 VN1R66P-201ENST00000412929 916 ntBASIC8.54□□□□□ -1.04
SNED1Q8TER0 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SNED1Q8TER0 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC8.54□□□□□ -1.04
SNED1Q8TER0 AC007383.1-201ENST00000445875 636 ntBASIC8.54□□□□□ -1.04
SNED1Q8TER0 NMNAT1P3-201ENST00000457517 888 ntBASIC8.54□□□□□ -1.04
SNED1Q8TER0 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC8.54□□□□□ -1.04
SNED1Q8TER0 AP002884.1-201ENST00000479691 655 ntBASIC8.54□□□□□ -1.04
SNED1Q8TER0 AC122718.2-201ENST00000505325 591 ntBASIC8.54□□□□□ -1.04
SNED1Q8TER0 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
SNED1Q8TER0 HMGN1P16-201ENST00000508308 283 ntBASIC8.54□□□□□ -1.04
SNED1Q8TER0 MAPK10-223ENST00000511167 1265 ntTSL 5 BASIC8.54□□□□□ -1.04
SNED1Q8TER0 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC8.54□□□□□ -1.04
SNED1Q8TER0 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
SNED1Q8TER0 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC8.54□□□□□ -1.04
SNED1Q8TER0 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC8.54□□□□□ -1.04
SNED1Q8TER0 MIR3154-201ENST00000577829 84 ntBASIC8.54□□□□□ -1.04
SNED1Q8TER0 AC012368.3-201ENST00000604190 219 ntBASIC8.54□□□□□ -1.04
SNED1Q8TER0 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SNED1Q8TER0 AC005514.1-201ENST00000623521 208 ntBASIC8.54□□□□□ -1.04
SNED1Q8TER0 LINC01173-201ENST00000629370 331 ntTSL 3 BASIC8.54□□□□□ -1.04
SNED1Q8TER0 SCN11A-201ENST00000302328 6500 ntAPPRIS P2 TSL 5 BASIC8.54□□□□□ -1.04
SNED1Q8TER0 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC8.54□□□□□ -1.04
SNED1Q8TER0 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SNED1Q8TER0 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
SNED1Q8TER0 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
SNED1Q8TER0 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC8.54□□□□□ -1.04
SNED1Q8TER0 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
SNED1Q8TER0 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC8.54□□□□□ -1.04
SNED1Q8TER0 ZNF19-210ENST00000567225 2838 ntTSL 3 BASIC8.54□□□□□ -1.04
SNED1Q8TER0 LYRM1-204ENST00000439021 1558 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
SNED1Q8TER0 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
SNED1Q8TER0 BCLAF3-203ENST00000379687 6528 ntAPPRIS P2 TSL 5 BASIC8.54□□□□□ -1.04
SNED1Q8TER0 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC8.54□□□□□ -1.04
SNED1Q8TER0 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC8.54□□□□□ -1.04
SNED1Q8TER0 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
SNED1Q8TER0 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SNED1Q8TER0 KCTD6-201ENST00000355076 2425 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SNED1Q8TER0 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC8.54□□□□□ -1.04
SNED1Q8TER0 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC8.54□□□□□ -1.04
SNED1Q8TER0 OR7E122P-202ENST00000641144 6171 ntBASIC8.54□□□□□ -1.04
SNED1Q8TER0 OR51A10P-201ENST00000307165 937 ntBASIC8.54□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms