Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC6.25□□□□□ -1.41
SSX3Q99909 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SSX3Q99909 AC140658.6-201ENST00000603958 201 ntBASIC6.25□□□□□ -1.41
SSX3Q99909 AC020765.1-201ENST00000604296 328 ntBASIC6.25□□□□□ -1.41
SSX3Q99909 AL352984.2-201ENST00000611153 546 ntBASIC6.25□□□□□ -1.41
SSX3Q99909 AC012488.1-201ENST00000611221 640 ntBASIC6.25□□□□□ -1.41
SSX3Q99909 AC005899.7-201ENST00000618199 588 ntBASIC6.25□□□□□ -1.41
SSX3Q99909 AL353898.2-201ENST00000623000 255 ntBASIC6.25□□□□□ -1.41
SSX3Q99909 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC6.25□□□□□ -1.41
SSX3Q99909 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSX3Q99909 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SSX3Q99909 LIPF-202ENST00000355843 1357 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SSX3Q99909 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSX3Q99909 AL132656.3-201ENST00000606384 1595 ntBASIC6.25□□□□□ -1.41
SSX3Q99909 LINC02408-201ENST00000400306 1766 ntTSL 2 BASIC6.25□□□□□ -1.41
SSX3Q99909 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSX3Q99909 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSX3Q99909 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC6.25□□□□□ -1.41
SSX3Q99909 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SSX3Q99909 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.25□□□□□ -1.41
SSX3Q99909 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
SSX3Q99909 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
SSX3Q99909 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
SSX3Q99909 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSX3Q99909 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC6.24□□□□□ -1.41
SSX3Q99909 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.24□□□□□ -1.41
SSX3Q99909 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
SSX3Q99909 CASP10-201ENST00000272879 2073 ntTSL 2 BASIC6.24□□□□□ -1.41
SSX3Q99909 MMP20-201ENST00000260228 1956 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSX3Q99909 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC6.24□□□□□ -1.41
SSX3Q99909 EPHA7-201ENST00000369297 1885 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SSX3Q99909 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSX3Q99909 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SSX3Q99909 NASP-203ENST00000372052 1458 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
SSX3Q99909 OR7E11P-202ENST00000642027 1491 ntBASIC6.24□□□□□ -1.41
SSX3Q99909 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
SSX3Q99909 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.24□□□□□ -1.41
SSX3Q99909 DEFB124-201ENST00000317676 216 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSX3Q99909 FHL1-203ENST00000370676 833 ntTSL 5 BASIC6.24□□□□□ -1.41
SSX3Q99909 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSX3Q99909 SNORA70I-201ENST00000384544 135 ntBASIC6.24□□□□□ -1.41
SSX3Q99909 RPL36A-202ENST00000392994 691 ntTSL 2 BASIC6.24□□□□□ -1.41
SSX3Q99909 RPL7P58-201ENST00000402913 758 ntBASIC6.24□□□□□ -1.41
SSX3Q99909 MIR1231-201ENST00000408101 92 ntBASIC6.24□□□□□ -1.41
SSX3Q99909 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC6.24□□□□□ -1.41
SSX3Q99909 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.24□□□□□ -1.41
SSX3Q99909 ELOBP4-201ENST00000423418 296 ntBASIC6.24□□□□□ -1.41
SSX3Q99909 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC6.24□□□□□ -1.41
SSX3Q99909 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.24□□□□□ -1.41
SSX3Q99909 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC6.24□□□□□ -1.41
SSX3Q99909 AC108039.2-201ENST00000440214 359 ntBASIC6.24□□□□□ -1.41
SSX3Q99909 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC6.24□□□□□ -1.41
SSX3Q99909 AL356311.1-201ENST00000451697 258 ntTSL 3 BASIC6.24□□□□□ -1.41
SSX3Q99909 PCMTD1P3-201ENST00000451824 472 ntBASIC6.24□□□□□ -1.41
SSX3Q99909 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC6.24□□□□□ -1.41
SSX3Q99909 RN7SL55P-201ENST00000464534 297 ntBASIC6.24□□□□□ -1.41
SSX3Q99909 C1orf112-208ENST00000496973 782 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSX3Q99909 FAM177A1P1-201ENST00000503598 473 ntBASIC6.24□□□□□ -1.41
SSX3Q99909 OR7E83P-201ENST00000511021 970 ntBASIC6.24□□□□□ -1.41
SSX3Q99909 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.24□□□□□ -1.41
SSX3Q99909 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC6.24□□□□□ -1.41
SSX3Q99909 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC6.24□□□□□ -1.41
SSX3Q99909 AP003174.3-201ENST00000537926 516 ntBASIC6.24□□□□□ -1.41
SSX3Q99909 CHCHD3P2-201ENST00000550751 639 ntBASIC6.24□□□□□ -1.41
SSX3Q99909 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC6.24□□□□□ -1.41
SSX3Q99909 FDPSP3-201ENST00000556903 1013 ntBASIC6.24□□□□□ -1.41
SSX3Q99909 AC026254.4-201ENST00000581118 454 ntTSL 2 BASIC6.24□□□□□ -1.41
SSX3Q99909 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC6.24□□□□□ -1.41
SSX3Q99909 ACACA-232ENST00000614438 569 ntTSL 2 BASIC6.24□□□□□ -1.41
SSX3Q99909 AC068234.2-201ENST00000619646 522 ntBASIC6.24□□□□□ -1.41
SSX3Q99909 AC110769.3-201ENST00000624567 1173 ntBASIC6.24□□□□□ -1.41
SSX3Q99909 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSX3Q99909 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSX3Q99909 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
SSX3Q99909 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSX3Q99909 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSX3Q99909 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.24□□□□□ -1.41
SSX3Q99909 GTPBP10-202ENST00000257659 1740 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SSX3Q99909 OAS2-207ENST00000620097 2908 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
SSX3Q99909 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSX3Q99909 NUMB-211ENST00000554521 1406 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SSX3Q99909 P2RY14-201ENST00000309170 2513 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSX3Q99909 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
SSX3Q99909 GOT2P1-201ENST00000440922 1309 ntBASIC6.24□□□□□ -1.41
SSX3Q99909 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSX3Q99909 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
SSX3Q99909 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SSX3Q99909 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
SSX3Q99909 MAPK10-287ENST00000641217 3037 ntBASIC6.23□□□□□ -1.41
SSX3Q99909 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.23□□□□□ -1.41
SSX3Q99909 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SSX3Q99909 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SSX3Q99909 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
SSX3Q99909 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.23□□□□□ -1.41
SSX3Q99909 AC104083.1-201ENST00000569449 2615 ntBASIC6.23□□□□□ -1.41
SSX3Q99909 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
SSX3Q99909 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
SSX3Q99909 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SSX3Q99909 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
SSX3Q99909 SCGB2A2-201ENST00000227918 505 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms