Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
ERCC3P19447 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
ERCC3P19447 METTL5-202ENST00000308099 629 ntTSL 3 BASIC8.96□□□□□ -0.98
ERCC3P19447 RNU1-11P-201ENST00000383975 164 ntBASIC8.96□□□□□ -0.98
ERCC3P19447 RN7SKP117-201ENST00000410175 264 ntBASIC8.96□□□□□ -0.98
ERCC3P19447 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC8.96□□□□□ -0.98
ERCC3P19447 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC8.96□□□□□ -0.98
ERCC3P19447 AC009228.1-203ENST00000430105 432 ntTSL 3 BASIC8.96□□□□□ -0.98
ERCC3P19447 OR10G8-201ENST00000431524 1045 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
ERCC3P19447 AL589990.1-201ENST00000432210 592 ntTSL 3 BASIC8.96□□□□□ -0.98
ERCC3P19447 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC8.96□□□□□ -0.98
ERCC3P19447 AC234782.3-201ENST00000461229 433 ntBASIC8.96□□□□□ -0.98
ERCC3P19447 NPSR1-208ENST00000465305 814 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
ERCC3P19447 AC097263.1-201ENST00000496795 606 ntBASIC8.96□□□□□ -0.98
ERCC3P19447 AK4P6-201ENST00000505168 528 ntBASIC8.96□□□□□ -0.98
ERCC3P19447 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC8.96□□□□□ -0.98
ERCC3P19447 NREP-217ENST00000509025 987 ntTSL 3 BASIC8.96□□□□□ -0.98
ERCC3P19447 AC022441.1-201ENST00000512599 794 ntTSL 3 BASIC8.96□□□□□ -0.98
ERCC3P19447 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
ERCC3P19447 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
ERCC3P19447 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC8.96□□□□□ -0.98
ERCC3P19447 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC8.96□□□□□ -0.98
ERCC3P19447 MUCL1-202ENST00000546809 439 ntAPPRIS ALT2 TSL 3 BASIC8.96□□□□□ -0.98
ERCC3P19447 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
ERCC3P19447 MTND1P24-201ENST00000552175 861 ntBASIC8.96□□□□□ -0.98
ERCC3P19447 EIF4EBP2P2-201ENST00000563883 333 ntBASIC8.96□□□□□ -0.98
ERCC3P19447 AC022558.2-201ENST00000566841 754 ntTSL 5 BASIC8.96□□□□□ -0.98
ERCC3P19447 AC139099.1-203ENST00000570366 607 ntTSL 3 BASIC8.96□□□□□ -0.98
ERCC3P19447 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC8.96□□□□□ -0.98
ERCC3P19447 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC8.96□□□□□ -0.98
ERCC3P19447 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC8.96□□□□□ -0.98
ERCC3P19447 MIR7162-201ENST00000611134 69 ntBASIC8.96□□□□□ -0.98
ERCC3P19447 AC023310.4-201ENST00000613130 650 ntBASIC8.96□□□□□ -0.98
ERCC3P19447 AC004801.6-201ENST00000616571 978 ntBASIC8.96□□□□□ -0.98
ERCC3P19447 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC8.96□□□□□ -0.98
ERCC3P19447 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC8.96□□□□□ -0.98
ERCC3P19447 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC8.96□□□□□ -0.98
ERCC3P19447 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC8.96□□□□□ -0.98
ERCC3P19447 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
ERCC3P19447 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
ERCC3P19447 MEF2A-205ENST00000557942 5413 ntTSL 5 BASIC8.96□□□□□ -0.98
ERCC3P19447 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
ERCC3P19447 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
ERCC3P19447 WBP2NL-201ENST00000328823 2255 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
ERCC3P19447 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC8.96□□□□□ -0.98
ERCC3P19447 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC8.96□□□□□ -0.98
ERCC3P19447 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC8.95□□□□□ -0.98
ERCC3P19447 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC8.95□□□□□ -0.98
ERCC3P19447 GCSAM-201ENST00000308910 3336 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
ERCC3P19447 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
ERCC3P19447 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC8.95□□□□□ -0.98
ERCC3P19447 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
ERCC3P19447 CASP10-201ENST00000272879 2073 ntTSL 2 BASIC8.95□□□□□ -0.98
ERCC3P19447 DPY19L1P1-201ENST00000417811 2594 ntBASIC8.95□□□□□ -0.98
ERCC3P19447 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
ERCC3P19447 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
ERCC3P19447 PIGN-231ENST00000639174 4095 ntTSL 5 BASIC8.95□□□□□ -0.98
ERCC3P19447 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
ERCC3P19447 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC8.95□□□□□ -0.98
ERCC3P19447 LINC01105-204ENST00000444416 2695 ntTSL 2 BASIC8.95□□□□□ -0.98
ERCC3P19447 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
ERCC3P19447 LINC02408-201ENST00000400306 1766 ntTSL 2 BASIC8.95□□□□□ -0.98
ERCC3P19447 OR2T10-201ENST00000330500 1049 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
ERCC3P19447 RNA5SP442-201ENST00000365050 107 ntBASIC8.95□□□□□ -0.98
ERCC3P19447 RNA5SP79-201ENST00000365193 109 ntBASIC8.95□□□□□ -0.98
ERCC3P19447 SNORA7B-201ENST00000384360 139 ntBASIC8.95□□□□□ -0.98
ERCC3P19447 PPP1R7-204ENST00000402734 883 ntTSL 3 BASIC8.95□□□□□ -0.98
ERCC3P19447 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC8.95□□□□□ -0.98
ERCC3P19447 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC8.95□□□□□ -0.98
ERCC3P19447 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC8.95□□□□□ -0.98
ERCC3P19447 OR13Z1P-201ENST00000416141 834 ntBASIC8.95□□□□□ -0.98
ERCC3P19447 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
ERCC3P19447 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC8.95□□□□□ -0.98
ERCC3P19447 OR7E36P-201ENST00000419933 954 ntBASIC8.95□□□□□ -0.98
ERCC3P19447 PPIL1P1-201ENST00000423936 499 ntBASIC8.95□□□□□ -0.98
ERCC3P19447 FDPSP6-201ENST00000425091 512 ntBASIC8.95□□□□□ -0.98
ERCC3P19447 AC011747.1-201ENST00000425678 565 ntTSL 4 BASIC8.95□□□□□ -0.98
ERCC3P19447 AC092646.1-201ENST00000427142 901 ntBASIC8.95□□□□□ -0.98
ERCC3P19447 RPS26P4-201ENST00000431743 355 ntBASIC8.95□□□□□ -0.98
ERCC3P19447 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
ERCC3P19447 MTND1P26-201ENST00000440488 538 ntBASIC8.95□□□□□ -0.98
ERCC3P19447 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC8.95□□□□□ -0.98
ERCC3P19447 AL136454.1-201ENST00000443181 466 ntBASIC8.95□□□□□ -0.98
ERCC3P19447 RPL24P8-201ENST00000446071 474 ntBASIC8.95□□□□□ -0.98
ERCC3P19447 RN7SL861P-201ENST00000473793 285 ntBASIC8.95□□□□□ -0.98
ERCC3P19447 AC022336.1-201ENST00000475510 337 ntBASIC8.95□□□□□ -0.98
ERCC3P19447 AC087385.2-201ENST00000477729 498 ntBASIC8.95□□□□□ -0.98
ERCC3P19447 AC018639.1-201ENST00000492994 442 ntBASIC8.95□□□□□ -0.98
ERCC3P19447 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC8.95□□□□□ -0.98
ERCC3P19447 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC8.95□□□□□ -0.98
ERCC3P19447 IGHVII-49-1-201ENST00000521760 224 ntBASIC8.95□□□□□ -0.98
ERCC3P19447 AC104115.2-201ENST00000523026 687 ntBASIC8.95□□□□□ -0.98
ERCC3P19447 C1DP5-201ENST00000525775 383 ntBASIC8.95□□□□□ -0.98
ERCC3P19447 OR7E13P-201ENST00000526052 910 ntBASIC8.95□□□□□ -0.98
ERCC3P19447 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
ERCC3P19447 AC090589.2-201ENST00000532022 332 ntTSL 3 BASIC8.95□□□□□ -0.98
ERCC3P19447 AL049869.4-201ENST00000555669 178 ntBASIC8.95□□□□□ -0.98
ERCC3P19447 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC8.95□□□□□ -0.98
ERCC3P19447 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC8.95□□□□□ -0.98
ERCC3P19447 AC005632.2-201ENST00000564271 828 ntBASIC8.95□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms