Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 EIF3EP2-201ENST00000423042 1814 ntBASIC9.52□□□□□ -0.89
LRCH3Q96II8 LAMB4-203ENST00000418464 2600 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
LRCH3Q96II8 EIF1AX-202ENST00000379607 4427 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LRCH3Q96II8 EIF4G3-202ENST00000356916 2179 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
LRCH3Q96II8 HLTF-208ENST00000494055 3633 ntAPPRIS P3 TSL 2 BASIC9.51□□□□□ -0.89
LRCH3Q96II8 AC023632.6-201ENST00000624338 2177 ntBASIC9.51□□□□□ -0.89
LRCH3Q96II8 MCTP1-202ENST00000429576 3159 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
LRCH3Q96II8 MAPK10-386ENST00000642038 2354 ntBASIC9.51□□□□□ -0.89
LRCH3Q96II8 SPATA46-201ENST00000367935 1711 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LRCH3Q96II8 AC092132.2-201ENST00000611227 2744 ntBASIC9.51□□□□□ -0.89
LRCH3Q96II8 ERN1-201ENST00000433197 7876 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LRCH3Q96II8 TTC23-214ENST00000558663 2068 ntAPPRIS P2 TSL 2 BASIC9.51□□□□□ -0.89
LRCH3Q96II8 AC016526.3-201ENST00000624275 3931 ntBASIC9.51□□□□□ -0.89
LRCH3Q96II8 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LRCH3Q96II8 ZNF41-201ENST00000313116 4297 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LRCH3Q96II8 POLR3B-202ENST00000539066 4118 ntTSL 2 BASIC9.51□□□□□ -0.89
LRCH3Q96II8 GAPVD1-219ENST00000495955 5309 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
LRCH3Q96II8 PABPC1L-203ENST00000217075 670 ntTSL 5 BASIC9.51□□□□□ -0.89
LRCH3Q96II8 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
LRCH3Q96II8 RNFT1P3-201ENST00000340898 1052 ntBASIC9.51□□□□□ -0.89
LRCH3Q96II8 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LRCH3Q96II8 GSTM1-203ENST00000369819 790 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
LRCH3Q96II8 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
LRCH3Q96II8 RNU6-413P-201ENST00000384115 107 ntBASIC9.51□□□□□ -0.89
LRCH3Q96II8 MT-TL1-201ENST00000386347 75 ntBASIC9.51□□□□□ -0.89
LRCH3Q96II8 MCTS2P-201ENST00000394552 546 ntBASIC9.51□□□□□ -0.89
LRCH3Q96II8 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LRCH3Q96II8 TATDN1P1-201ENST00000414123 891 ntBASIC9.51□□□□□ -0.89
LRCH3Q96II8 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC9.51□□□□□ -0.89
LRCH3Q96II8 AMMECR1-IT1-201ENST00000418848 561 ntTSL 5 BASIC9.51□□□□□ -0.89
LRCH3Q96II8 AC004448.2-201ENST00000422360 586 ntBASIC9.51□□□□□ -0.89
LRCH3Q96II8 GLRXP1-201ENST00000423261 334 ntBASIC9.51□□□□□ -0.89
LRCH3Q96II8 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC9.51□□□□□ -0.89
LRCH3Q96II8 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC9.51□□□□□ -0.89
LRCH3Q96II8 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC9.51□□□□□ -0.89
LRCH3Q96II8 AL357037.1-201ENST00000454758 322 ntBASIC9.51□□□□□ -0.89
LRCH3Q96II8 AL354872.1-201ENST00000456361 967 ntBASIC9.51□□□□□ -0.89
LRCH3Q96II8 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC9.51□□□□□ -0.89
LRCH3Q96II8 RN7SL841P-201ENST00000470547 297 ntBASIC9.51□□□□□ -0.89
LRCH3Q96II8 RPL7P17-201ENST00000470927 724 ntBASIC9.51□□□□□ -0.89
LRCH3Q96II8 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
LRCH3Q96II8 AC079841.1-201ENST00000481228 950 ntBASIC9.51□□□□□ -0.89
LRCH3Q96II8 AC109486.1-201ENST00000486833 374 ntBASIC9.51□□□□□ -0.89
LRCH3Q96II8 RN7SL862P-201ENST00000491550 298 ntBASIC9.51□□□□□ -0.89
LRCH3Q96II8 RN7SL124P-201ENST00000498656 285 ntBASIC9.51□□□□□ -0.89
LRCH3Q96II8 AC114967.1-201ENST00000504890 259 ntBASIC9.51□□□□□ -0.89
LRCH3Q96II8 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC9.51□□□□□ -0.89
LRCH3Q96II8 ARL2BPP4-201ENST00000506854 471 ntBASIC9.51□□□□□ -0.89
LRCH3Q96II8 RNU6-1045P-201ENST00000516321 107 ntBASIC9.51□□□□□ -0.89
LRCH3Q96II8 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC9.51□□□□□ -0.89
LRCH3Q96II8 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC9.51□□□□□ -0.89
LRCH3Q96II8 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC9.51□□□□□ -0.89
LRCH3Q96II8 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC9.51□□□□□ -0.89
LRCH3Q96II8 FAM92A1P1-201ENST00000528023 890 ntBASIC9.51□□□□□ -0.89
LRCH3Q96II8 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC9.51□□□□□ -0.89
LRCH3Q96II8 JPT1-211ENST00000581874 517 ntTSL 5 BASIC9.51□□□□□ -0.89
LRCH3Q96II8 RN7SL468P-201ENST00000582256 294 ntBASIC9.51□□□□□ -0.89
LRCH3Q96II8 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC9.51□□□□□ -0.89
LRCH3Q96II8 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC9.51□□□□□ -0.89
LRCH3Q96II8 AC091304.9-201ENST00000612091 226 ntBASIC9.51□□□□□ -0.89
LRCH3Q96II8 MIR6883-201ENST00000614952 78 ntBASIC9.51□□□□□ -0.89
LRCH3Q96II8 AC245033.3-201ENST00000617986 224 ntBASIC9.51□□□□□ -0.89
LRCH3Q96II8 CR381653.2-201ENST00000624041 768 ntBASIC9.51□□□□□ -0.89
LRCH3Q96II8 OR1S1-201ENST00000624470 978 ntBASIC9.51□□□□□ -0.89
LRCH3Q96II8 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC9.51□□□□□ -0.89
LRCH3Q96II8 LINC00032-201ENST00000638495 1040 ntBASIC9.51□□□□□ -0.89
LRCH3Q96II8 IFT122-206ENST00000440957 4007 ntTSL 2 BASIC9.51□□□□□ -0.89
LRCH3Q96II8 SPATA13-204ENST00000399949 3026 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
LRCH3Q96II8 ZNF469-201ENST00000437464 13203 ntAPPRIS P2 TSL 5 BASIC9.51□□□□□ -0.89
LRCH3Q96II8 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
LRCH3Q96II8 ATP8B5P-202ENST00000423138 2157 ntBASIC9.51□□□□□ -0.89
LRCH3Q96II8 SLC17A6-201ENST00000263160 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LRCH3Q96II8 ERCC8-201ENST00000265038 2017 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LRCH3Q96II8 CPA6-201ENST00000297770 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LRCH3Q96II8 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
LRCH3Q96II8 NEK2P4-201ENST00000425793 1329 ntBASIC9.51□□□□□ -0.89
LRCH3Q96II8 SEC16B-204ENST00000464631 2948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
LRCH3Q96II8 ZNF148-207ENST00000492394 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LRCH3Q96II8 PPP6R3-214ENST00000527403 4862 ntTSL 5 BASIC9.51□□□□□ -0.89
LRCH3Q96II8 CPT1B-201ENST00000312108 2592 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LRCH3Q96II8 FBN2-203ENST00000507835 1884 ntTSL 5 BASIC9.51□□□□□ -0.89
LRCH3Q96II8 MAOA-201ENST00000338702 4015 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LRCH3Q96II8 AC018682.1-201ENST00000506009 1519 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
LRCH3Q96II8 RAP2C-205ENST00000620646 3341 ntTSL 5 BASIC9.51□□□□□ -0.89
LRCH3Q96II8 AC007238.1-201ENST00000434096 1741 ntBASIC9.51□□□□□ -0.89
LRCH3Q96II8 DYDC2-207ENST00000616870 1723 ntAPPRIS P3 TSL 3 BASIC9.51□□□□□ -0.89
LRCH3Q96II8 AC092683.1-204ENST00000610408 2830 ntTSL 2 BASIC9.5□□□□□ -0.89
LRCH3Q96II8 AC159540.2-202ENST00000613749 2830 ntTSL 2 BASIC9.5□□□□□ -0.89
LRCH3Q96II8 SERPINB9-201ENST00000380698 4118 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
LRCH3Q96II8 AL354740.1-201ENST00000586726 2681 ntTSL 5 BASIC9.5□□□□□ -0.89
LRCH3Q96II8 AC008758.1-201ENST00000428311 4505 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
LRCH3Q96II8 ALDH1A1-201ENST00000297785 2107 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
LRCH3Q96II8 MFSD8-259ENST00000642042 2303 ntBASIC9.5□□□□□ -0.89
LRCH3Q96II8 RABGAP1-202ENST00000373647 4997 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
LRCH3Q96II8 ZNF774-202ENST00000379090 5613 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
LRCH3Q96II8 TGFB2-201ENST00000366929 5053 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
LRCH3Q96II8 SLC11A2-212ENST00000547688 2401 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
LRCH3Q96II8 AC011815.1-201ENST00000586922 4382 ntTSL 2 BASIC9.5□□□□□ -0.89
LRCH3Q96II8 AC104825.2-201ENST00000505448 3249 ntBASIC9.5□□□□□ -0.89
LRCH3Q96II8 AC083902.2-201ENST00000511828 10086 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms