Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 CTH-201ENST00000346806 1196 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
AP1S3Q96PC3 TAC1-203ENST00000350485 975 ntTSL 5 BASIC5.4□□□□□ -1.54
AP1S3Q96PC3 TRAV17-201ENST00000390445 484 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
AP1S3Q96PC3 ISY1-202ENST00000393292 988 ntTSL 5 BASIC5.4□□□□□ -1.54
AP1S3Q96PC3 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
AP1S3Q96PC3 U3.34-201ENST00000408198 212 ntBASIC5.4□□□□□ -1.54
AP1S3Q96PC3 AC011753.4-201ENST00000417974 311 ntBASIC5.4□□□□□ -1.54
AP1S3Q96PC3 GSTA6P-201ENST00000424144 582 ntBASIC5.4□□□□□ -1.54
AP1S3Q96PC3 Z83838.1-201ENST00000431036 925 ntBASIC5.4□□□□□ -1.54
AP1S3Q96PC3 AC091132.2-201ENST00000433601 769 ntTSL 3 BASIC5.4□□□□□ -1.54
AP1S3Q96PC3 AC022816.1-201ENST00000436469 804 ntTSL 5 BASIC5.4□□□□□ -1.54
AP1S3Q96PC3 OSBPL10-AS1-204ENST00000436598 513 ntTSL 3 BASIC5.4□□□□□ -1.54
AP1S3Q96PC3 AL359502.1-201ENST00000437334 692 ntTSL 3 BASIC5.4□□□□□ -1.54
AP1S3Q96PC3 AC005040.1-201ENST00000437783 482 ntBASIC5.4□□□□□ -1.54
AP1S3Q96PC3 AL121885.2-201ENST00000440255 819 ntTSL 3 BASIC5.4□□□□□ -1.54
AP1S3Q96PC3 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC5.4□□□□□ -1.54
AP1S3Q96PC3 AL137074.1-201ENST00000442640 465 ntBASIC5.4□□□□□ -1.54
AP1S3Q96PC3 IGKV1OR2-2-201ENST00000451163 355 ntBASIC5.4□□□□□ -1.54
AP1S3Q96PC3 AC080129.1-201ENST00000457815 406 ntTSL 3 BASIC5.4□□□□□ -1.54
AP1S3Q96PC3 VN1R6P-201ENST00000458417 907 ntBASIC5.4□□□□□ -1.54
AP1S3Q96PC3 RN7SL869P-201ENST00000497032 300 ntBASIC5.4□□□□□ -1.54
AP1S3Q96PC3 AC017007.5-201ENST00000511590 874 ntTSL 2 BASIC5.4□□□□□ -1.54
AP1S3Q96PC3 AC027801.3-201ENST00000515049 698 ntBASIC5.4□□□□□ -1.54
AP1S3Q96PC3 HTR4-204ENST00000517929 1201 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
AP1S3Q96PC3 ERLIN2-210ENST00000523107 771 ntTSL 3 BASIC5.4□□□□□ -1.54
AP1S3Q96PC3 C11orf65-203ENST00000525729 1263 ntTSL 2 BASIC5.4□□□□□ -1.54
AP1S3Q96PC3 OR2AL1P-201ENST00000529862 507 ntBASIC5.4□□□□□ -1.54
AP1S3Q96PC3 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC5.4□□□□□ -1.54
AP1S3Q96PC3 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC5.4□□□□□ -1.54
AP1S3Q96PC3 Z95115.1-202ENST00000565764 981 ntTSL 2 BASIC5.4□□□□□ -1.54
AP1S3Q96PC3 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
AP1S3Q96PC3 AC023983.1-201ENST00000579347 567 ntTSL 5 BASIC5.4□□□□□ -1.54
AP1S3Q96PC3 AC007136.1-201ENST00000589141 199 ntBASIC5.4□□□□□ -1.54
AP1S3Q96PC3 DARS-AS1-213ENST00000596410 741 ntTSL 5 BASIC5.4□□□□□ -1.54
AP1S3Q96PC3 PROX1-AS1-205ENST00000598091 720 ntTSL 5 BASIC5.4□□□□□ -1.54
AP1S3Q96PC3 AC012370.2-202ENST00000600508 1099 ntTSL 5 BASIC5.4□□□□□ -1.54
AP1S3Q96PC3 OR10AE1P-201ENST00000606962 1029 ntBASIC5.4□□□□□ -1.54
AP1S3Q96PC3 AL109933.4-201ENST00000612111 157 ntBASIC5.4□□□□□ -1.54
AP1S3Q96PC3 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
AP1S3Q96PC3 ZNF132-203ENST00000639285 1200 ntTSL 5 BASIC5.4□□□□□ -1.54
AP1S3Q96PC3 AP000356.4-201ENST00000639500 172 ntBASIC5.4□□□□□ -1.54
AP1S3Q96PC3 OFD1P17-201ENST00000437639 3018 ntBASIC5.4□□□□□ -1.55
AP1S3Q96PC3 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
AP1S3Q96PC3 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
AP1S3Q96PC3 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
AP1S3Q96PC3 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
AP1S3Q96PC3 AP001347.1-201ENST00000428809 1332 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
AP1S3Q96PC3 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC5.4□□□□□ -1.55
AP1S3Q96PC3 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
AP1S3Q96PC3 TMCC1P1-201ENST00000518897 1980 ntBASIC5.4□□□□□ -1.55
AP1S3Q96PC3 IKZF3-207ENST00000377944 1669 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
AP1S3Q96PC3 IKZF3-208ENST00000377945 1696 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
AP1S3Q96PC3 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC5.4□□□□□ -1.55
AP1S3Q96PC3 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
AP1S3Q96PC3 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
AP1S3Q96PC3 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC5.4□□□□□ -1.55
AP1S3Q96PC3 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
AP1S3Q96PC3 KLRB1-201ENST00000229402 1448 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
AP1S3Q96PC3 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
AP1S3Q96PC3 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
AP1S3Q96PC3 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 AL591135.1-201ENST00000401578 5914 ntBASIC5.39□□□□□ -1.55
AP1S3Q96PC3 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 AP003471.1-202ENST00000319051 1988 ntBASIC5.39□□□□□ -1.55
AP1S3Q96PC3 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 AC079178.2-201ENST00000439323 1624 ntBASIC5.39□□□□□ -1.55
AP1S3Q96PC3 ATP5A1P10-201ENST00000622403 1603 ntBASIC5.39□□□□□ -1.55
AP1S3Q96PC3 AL731537.1-201ENST00000343087 421 ntTSL 3 BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 ATF3-204ENST00000366983 858 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 AL451142.1-201ENST00000375867 775 ntBASIC5.39□□□□□ -1.55
AP1S3Q96PC3 ETFRF1-201ENST00000381356 1134 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 NPM1P46-201ENST00000399556 865 ntBASIC5.39□□□□□ -1.55
AP1S3Q96PC3 AC243547.1-201ENST00000415065 408 ntTSL 2 BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 AL590714.1-201ENST00000420498 379 ntTSL 3 BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 METTL8P1-201ENST00000428182 611 ntBASIC5.39□□□□□ -1.55
AP1S3Q96PC3 MRLN-202ENST00000430431 495 ntAPPRIS P2 TSL 2 BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 MIR4435-2HG-205ENST00000431385 843 ntTSL 3 BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 RPL35P8-201ENST00000433284 337 ntBASIC5.39□□□□□ -1.55
AP1S3Q96PC3 AC231532.1-201ENST00000438584 312 ntBASIC5.39□□□□□ -1.55
AP1S3Q96PC3 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 AC239860.1-201ENST00000444680 1270 ntBASIC5.39□□□□□ -1.55
AP1S3Q96PC3 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 AL603839.3-201ENST00000450713 605 ntTSL 3 BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 NDUFB11P1-201ENST00000455818 465 ntBASIC5.39□□□□□ -1.55
AP1S3Q96PC3 DNAJC9-AS1-203ENST00000457758 548 ntTSL 3 BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 AC066616.1-201ENST00000486795 413 ntBASIC5.39□□□□□ -1.55
AP1S3Q96PC3 QTRT2-215ENST00000493014 1046 ntTSL 2 BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 RN7SL434P-201ENST00000495872 271 ntBASIC5.39□□□□□ -1.55
AP1S3Q96PC3 AC027607.1-201ENST00000503034 534 ntTSL 3 BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 PABPC1P1-201ENST00000506347 591 ntBASIC5.39□□□□□ -1.55
AP1S3Q96PC3 AP004833.1-201ENST00000507987 1238 ntBASIC5.39□□□□□ -1.55
AP1S3Q96PC3 RN7SKP14-201ENST00000516000 329 ntBASIC5.39□□□□□ -1.55
AP1S3Q96PC3 ZFAND1-214ENST00000521287 772 ntTSL 3 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms