Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC061975.5-201ENST00000584928 1441 ntBASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 NF1P8-201ENST00000415351 1461 ntBASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 AL353622.1-201ENST00000604716 1945 ntBASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 RPL12P1-201ENST00000374520 498 ntBASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 FAUP2-201ENST00000394301 401 ntBASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 FECHP1-201ENST00000431896 1214 ntBASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 NUCKS1P1-201ENST00000452067 703 ntBASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 CBX5P1-201ENST00000468470 561 ntBASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 HSPE1P10-201ENST00000508631 558 ntBASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 AC027801.3-201ENST00000515049 698 ntBASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 RPS20-202ENST00000518875 671 ntTSL 2 BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 AC009955.2-201ENST00000597288 542 ntBASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 FXYD6P1-201ENST00000604857 285 ntBASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 AL355333.1-201ENST00000605632 279 ntBASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 CACNB2-214ENST00000612743 597 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 AL049536.1-202ENST00000623572 455 ntTSL 5 BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 MAK-202ENST00000354489 3941 ntTSL 5 BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 ZNF840P-201ENST00000504759 1996 ntBASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
C9orf40Q8IXQ3 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 KARSP2-201ENST00000415696 1639 ntBASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 RNA5SP472-201ENST00000363868 119 ntBASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 RN7SKP107-201ENST00000364157 290 ntBASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 SOD1P1-201ENST00000407803 440 ntBASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 MYO5BP3-201ENST00000431872 1279 ntBASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 RPLP0P1-201ENST00000457002 361 ntBASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 NACAP6-201ENST00000509572 622 ntBASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 AC134698.1-201ENST00000511619 643 ntBASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 PGAM4P2-201ENST00000512491 721 ntBASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 OR4A1P-201ENST00000532342 920 ntBASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 OR7E161P-201ENST00000533722 967 ntBASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 AC011611.6-201ENST00000547483 255 ntBASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms