Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC8.3□□□□□ -1.08
POLR2AP24928 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC8.3□□□□□ -1.08
POLR2AP24928 TRPM1-201ENST00000256552 5514 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
POLR2AP24928 FLNB-214ENST00000493452 7402 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
POLR2AP24928 LINC01613-201ENST00000561476 2780 ntBASIC8.3□□□□□ -1.08
POLR2AP24928 ZMYND8-218ENST00000540497 3405 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
POLR2AP24928 RNU6-673P-201ENST00000365084 104 ntBASIC8.3□□□□□ -1.08
POLR2AP24928 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
POLR2AP24928 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
POLR2AP24928 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC8.3□□□□□ -1.08
POLR2AP24928 NMNAT1P3-201ENST00000457517 888 ntBASIC8.3□□□□□ -1.08
POLR2AP24928 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC8.3□□□□□ -1.08
POLR2AP24928 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC8.3□□□□□ -1.08
POLR2AP24928 RN7SL221P-201ENST00000466190 281 ntBASIC8.3□□□□□ -1.08
POLR2AP24928 AC094085.1-201ENST00000468914 584 ntBASIC8.3□□□□□ -1.08
POLR2AP24928 AC131233.1-201ENST00000479200 955 ntBASIC8.3□□□□□ -1.08
POLR2AP24928 HMGN1P17-201ENST00000513734 295 ntBASIC8.3□□□□□ -1.08
POLR2AP24928 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC8.3□□□□□ -1.08
POLR2AP24928 ANKS1B-205ENST00000546568 1281 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
POLR2AP24928 AL365181.4-201ENST00000609800 547 ntBASIC8.3□□□□□ -1.08
POLR2AP24928 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC8.29□□□□□ -1.08
POLR2AP24928 AL133230.1-201ENST00000431019 4587 ntTSL 2 BASIC8.29□□□□□ -1.08
POLR2AP24928 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC8.29□□□□□ -1.08
POLR2AP24928 CRYZ-201ENST00000340866 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
POLR2AP24928 ASNSP6-201ENST00000592770 1618 ntBASIC8.29□□□□□ -1.08
POLR2AP24928 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC8.29□□□□□ -1.08
POLR2AP24928 LINC01910-201ENST00000582251 2637 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
POLR2AP24928 KCNJ15-205ENST00000398930 2914 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
POLR2AP24928 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC8.29□□□□□ -1.08
POLR2AP24928 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
POLR2AP24928 CFAP57-201ENST00000372492 4244 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
POLR2AP24928 AC027097.2-201ENST00000588925 1976 ntTSL 2 BASIC8.29□□□□□ -1.08
POLR2AP24928 RPL11P4-201ENST00000332269 436 ntBASIC8.29□□□□□ -1.08
POLR2AP24928 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC8.29□□□□□ -1.08
POLR2AP24928 RPL34P19-201ENST00000415903 342 ntBASIC8.29□□□□□ -1.08
POLR2AP24928 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC8.29□□□□□ -1.08
POLR2AP24928 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
POLR2AP24928 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC8.29□□□□□ -1.08
POLR2AP24928 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC8.29□□□□□ -1.08
POLR2AP24928 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
POLR2AP24928 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
POLR2AP24928 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC8.29□□□□□ -1.08
POLR2AP24928 AC007688.1-201ENST00000475592 759 ntBASIC8.29□□□□□ -1.08
POLR2AP24928 AC112484.3-201ENST00000505910 329 ntBASIC8.29□□□□□ -1.08
POLR2AP24928 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC8.29□□□□□ -1.08
POLR2AP24928 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC8.29□□□□□ -1.08
POLR2AP24928 AL078601.3-201ENST00000573303 535 ntBASIC8.29□□□□□ -1.08
POLR2AP24928 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC8.29□□□□□ -1.08
POLR2AP24928 AC063977.7-201ENST00000594454 337 ntBASIC8.29□□□□□ -1.08
POLR2AP24928 AC137695.1-201ENST00000604126 489 ntBASIC8.29□□□□□ -1.08
POLR2AP24928 AC010325.3-201ENST00000641084 394 ntBASIC8.29□□□□□ -1.08
POLR2AP24928 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC8.29□□□□□ -1.08
POLR2AP24928 DUXAP8-204ENST00000447898 4136 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
POLR2AP24928 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC8.29□□□□□ -1.08
POLR2AP24928 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
POLR2AP24928 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC8.29□□□□□ -1.08
POLR2AP24928 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
POLR2AP24928 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC8.29□□□□□ -1.08
POLR2AP24928 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
POLR2AP24928 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
POLR2AP24928 SLC9A6-214ENST00000637581 4872 ntTSL 5 BASIC8.28□□□□□ -1.08
POLR2AP24928 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC8.28□□□□□ -1.08
POLR2AP24928 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC8.28□□□□□ -1.08
POLR2AP24928 RNA5SP512-201ENST00000364550 120 ntBASIC8.28□□□□□ -1.08
POLR2AP24928 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC8.28□□□□□ -1.08
POLR2AP24928 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC8.28□□□□□ -1.08
POLR2AP24928 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC8.28□□□□□ -1.08
POLR2AP24928 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC8.28□□□□□ -1.08
POLR2AP24928 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
POLR2AP24928 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
POLR2AP24928 MICAL2-203ENST00000379612 6625 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
POLR2AP24928 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
POLR2AP24928 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
POLR2AP24928 MKI67-202ENST00000368654 12678 ntAPPRIS P3 TSL 2 BASIC8.28□□□□□ -1.08
POLR2AP24928 SH3GLB1-203ENST00000535010 6227 ntTSL 2 BASIC8.28□□□□□ -1.08
POLR2AP24928 LINC00663-203ENST00000586885 2546 ntBASIC8.28□□□□□ -1.08
POLR2AP24928 AL627309.1-201ENST00000466430 2748 ntTSL 5 BASIC8.28□□□□□ -1.08
POLR2AP24928 EYA4-203ENST00000367895 5699 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
POLR2AP24928 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
POLR2AP24928 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
POLR2AP24928 GRIK2-202ENST00000358361 1981 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
POLR2AP24928 ATG13-207ENST00000526508 4199 ntTSL 5 BASIC8.28□□□□□ -1.08
POLR2AP24928 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
POLR2AP24928 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
POLR2AP24928 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
POLR2AP24928 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
POLR2AP24928 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
POLR2AP24928 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC8.28□□□□□ -1.08
POLR2AP24928 VN1R66P-201ENST00000412929 916 ntBASIC8.28□□□□□ -1.08
POLR2AP24928 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC8.28□□□□□ -1.08
POLR2AP24928 UQCRHP1-204ENST00000424609 274 ntBASIC8.28□□□□□ -1.08
POLR2AP24928 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC8.28□□□□□ -1.08
POLR2AP24928 RPL5P7-201ENST00000444235 813 ntBASIC8.28□□□□□ -1.08
POLR2AP24928 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC8.28□□□□□ -1.08
POLR2AP24928 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC8.28□□□□□ -1.08
POLR2AP24928 AC023513.1-201ENST00000604396 691 ntBASIC8.28□□□□□ -1.08
POLR2AP24928 HNRNPA3P9-201ENST00000604913 979 ntBASIC8.28□□□□□ -1.08
POLR2AP24928 AL161729.2-201ENST00000605700 456 ntBASIC8.28□□□□□ -1.08
POLR2AP24928 AC097641.3-201ENST00000613523 464 ntBASIC8.28□□□□□ -1.08
POLR2AP24928 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms