Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 MAP3K7CL-202ENST00000339024 2066 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
LRCH3Q96II8 MAP3K7CL-208ENST00000399935 2093 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
LRCH3Q96II8 FADS1-211ENST00000536991 2701 ntTSL 2 BASIC9.55□□□□□ -0.88
LRCH3Q96II8 FCRL4-201ENST00000271532 3459 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
LRCH3Q96II8 TARS-202ENST00000455217 2523 ntTSL 2 BASIC9.55□□□□□ -0.88
LRCH3Q96II8 LY9-201ENST00000263285 2443 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
LRCH3Q96II8 LPIN1-201ENST00000256720 5384 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
LRCH3Q96II8 ARHGAP19-201ENST00000358308 5390 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
LRCH3Q96II8 NEMP1-202ENST00000379391 5370 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
LRCH3Q96II8 SMPD4P1-203ENST00000443839 2108 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
LRCH3Q96II8 HERC2P2-205ENST00000619021 5746 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
LRCH3Q96II8 WDR36-204ENST00000513710 3140 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
LRCH3Q96II8 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC9.55□□□□□ -0.88
LRCH3Q96II8 POP4-202ENST00000585603 3385 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
LRCH3Q96II8 SRPK1-205ENST00000423325 4357 ntTSL 2 BASIC9.55□□□□□ -0.88
LRCH3Q96II8 FABP1-201ENST00000295834 555 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
LRCH3Q96II8 FXYD5-202ENST00000392217 632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
LRCH3Q96II8 MIR1302-11-201ENST00000408051 138 ntBASIC9.55□□□□□ -0.88
LRCH3Q96II8 MIR1302-9-201ENST00000408365 138 ntBASIC9.55□□□□□ -0.88
LRCH3Q96II8 SNORA11.3-201ENST00000408471 128 ntBASIC9.55□□□□□ -0.88
LRCH3Q96II8 MIR1269A-201ENST00000408636 105 ntBASIC9.55□□□□□ -0.88
LRCH3Q96II8 MIR1302-10-201ENST00000408734 138 ntBASIC9.55□□□□□ -0.88
LRCH3Q96II8 RN7SKP7-201ENST00000410540 285 ntBASIC9.55□□□□□ -0.88
LRCH3Q96II8 RNU4-74P-201ENST00000411280 161 ntBASIC9.55□□□□□ -0.88
LRCH3Q96II8 AL158825.1-201ENST00000414735 521 ntBASIC9.55□□□□□ -0.88
LRCH3Q96II8 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
LRCH3Q96II8 GTF2IP2-201ENST00000424290 697 ntBASIC9.55□□□□□ -0.88
LRCH3Q96II8 TMEM127-203ENST00000435268 582 ntTSL 3 BASIC9.55□□□□□ -0.88
LRCH3Q96II8 MTATP6P30-201ENST00000443540 664 ntBASIC9.55□□□□□ -0.88
LRCH3Q96II8 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
LRCH3Q96II8 PPIA-203ENST00000451562 544 ntTSL 2 BASIC9.55□□□□□ -0.88
LRCH3Q96II8 PAX8-AS1-208ENST00000456685 1207 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
LRCH3Q96II8 KLF3P2-201ENST00000465138 268 ntBASIC9.55□□□□□ -0.88
LRCH3Q96II8 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC9.55□□□□□ -0.88
LRCH3Q96II8 TMED11P-201ENST00000479478 690 ntBASIC9.55□□□□□ -0.88
LRCH3Q96II8 DEFB109A-201ENST00000482450 265 ntBASIC9.55□□□□□ -0.88
LRCH3Q96II8 GAPDHP22-201ENST00000491037 413 ntBASIC9.55□□□□□ -0.88
LRCH3Q96II8 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC9.55□□□□□ -0.88
LRCH3Q96II8 AC025459.1-201ENST00000504072 156 ntBASIC9.55□□□□□ -0.88
LRCH3Q96II8 FABP5P6-201ENST00000510588 409 ntBASIC9.55□□□□□ -0.88
LRCH3Q96II8 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC9.55□□□□□ -0.88
LRCH3Q96II8 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC9.55□□□□□ -0.88
LRCH3Q96II8 SSU72P6-201ENST00000532644 488 ntBASIC9.55□□□□□ -0.88
LRCH3Q96II8 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC9.55□□□□□ -0.88
LRCH3Q96II8 NTS-203ENST00000551529 801 ntTSL 3 BASIC9.55□□□□□ -0.88
LRCH3Q96II8 PSEN1-223ENST00000557511 1230 ntTSL 5 BASIC9.55□□□□□ -0.88
LRCH3Q96II8 AC109630.1-201ENST00000558846 730 ntTSL 3 BASIC9.55□□□□□ -0.88
LRCH3Q96II8 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC9.55□□□□□ -0.88
LRCH3Q96II8 AC073878.1-201ENST00000567503 474 ntTSL 3 BASIC9.55□□□□□ -0.88
LRCH3Q96II8 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC9.55□□□□□ -0.88
LRCH3Q96II8 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC9.55□□□□□ -0.88
LRCH3Q96II8 snoZ6.4-201ENST00000581669 55 ntBASIC9.55□□□□□ -0.88
LRCH3Q96II8 AC006504.3-201ENST00000586818 523 ntBASIC9.55□□□□□ -0.88
LRCH3Q96II8 AC011442.1-201ENST00000587831 366 ntTSL 5 BASIC9.55□□□□□ -0.88
LRCH3Q96II8 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC9.55□□□□□ -0.88
LRCH3Q96II8 AC091132.5-201ENST00000590995 560 ntTSL 5 BASIC9.55□□□□□ -0.88
LRCH3Q96II8 AL390816.3-201ENST00000604527 1066 ntBASIC9.55□□□□□ -0.88
LRCH3Q96II8 MIR1302-2-201ENST00000607096 138 ntBASIC9.55□□□□□ -0.88
LRCH3Q96II8 LINC02018-202ENST00000608707 445 ntTSL 3 BASIC9.55□□□□□ -0.88
LRCH3Q96II8 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC9.55□□□□□ -0.88
LRCH3Q96II8 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC9.55□□□□□ -0.88
LRCH3Q96II8 AL122125.1-201ENST00000616999 600 ntBASIC9.55□□□□□ -0.88
LRCH3Q96II8 SNORA11.6-201ENST00000619030 128 ntBASIC9.55□□□□□ -0.88
LRCH3Q96II8 AC004836.1-201ENST00000623032 634 ntBASIC9.55□□□□□ -0.88
LRCH3Q96II8 STK32A-209ENST00000626951 798 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
LRCH3Q96II8 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC9.55□□□□□ -0.88
LRCH3Q96II8 NOTCH2-201ENST00000256646 11389 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
LRCH3Q96II8 GJB2-202ENST00000382848 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
LRCH3Q96II8 ZNF234-204ENST00000592437 2292 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
LRCH3Q96II8 FANCM-202ENST00000542564 6167 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
LRCH3Q96II8 CNBD2-205ENST00000538900 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
LRCH3Q96II8 EMC3-201ENST00000245046 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
LRCH3Q96II8 LARS2-201ENST00000265537 4281 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
LRCH3Q96II8 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC9.55□□□□□ -0.88
LRCH3Q96II8 AC008663.2-202ENST00000519897 1418 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
LRCH3Q96II8 MYRIP-210ENST00000539167 4635 ntTSL 2 BASIC9.55□□□□□ -0.88
LRCH3Q96II8 PHF19-214ENST00000616568 4159 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
LRCH3Q96II8 FHL1-201ENST00000345434 2458 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
LRCH3Q96II8 LINC00939-202ENST00000507313 2819 ntTSL 2 BASIC9.55□□□□□ -0.88
LRCH3Q96II8 RFPL4B-201ENST00000441065 1900 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
LRCH3Q96II8 GNGT1-205ENST00000455502 1943 ntTSL 2 BASIC9.54□□□□□ -0.88
LRCH3Q96II8 ELOC-202ENST00000518127 1943 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LRCH3Q96II8 RIPOR2-202ENST00000378023 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
LRCH3Q96II8 TENM2-205ENST00000519204 9427 ntTSL 5 BASIC9.54□□□□□ -0.88
LRCH3Q96II8 SORBS2-206ENST00000393528 3043 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
LRCH3Q96II8 LINC01138-210ENST00000640832 1709 ntTSL 5 BASIC9.54□□□□□ -0.88
LRCH3Q96II8 MEGF10-201ENST00000274473 7594 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LRCH3Q96II8 ZIM2-207ENST00000601070 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LRCH3Q96II8 PIBF1-201ENST00000326291 3154 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LRCH3Q96II8 ARL11-201ENST00000282026 3760 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LRCH3Q96II8 AL137100.1-201ENST00000556703 1620 ntBASIC9.54□□□□□ -0.88
LRCH3Q96II8 PPARG-201ENST00000287820 1850 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
LRCH3Q96II8 FCAR-202ENST00000353758 537 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
LRCH3Q96II8 UBE2Q2P1-202ENST00000354771 883 ntBASIC9.54□□□□□ -0.88
LRCH3Q96II8 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
LRCH3Q96II8 SNORA14B-201ENST00000384452 135 ntBASIC9.54□□□□□ -0.88
LRCH3Q96II8 MIR106B-201ENST00000385301 82 ntBASIC9.54□□□□□ -0.88
LRCH3Q96II8 RNU6-876P-201ENST00000391295 104 ntBASIC9.54□□□□□ -0.88
LRCH3Q96II8 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC9.54□□□□□ -0.88
LRCH3Q96II8 FAT1P1-201ENST00000406588 507 ntBASIC9.54□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms