Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC30.58■■■□□ 2.49
COL17A1Q9UMD9 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
COL17A1Q9UMD9 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC30.58■■■□□ 2.49
COL17A1Q9UMD9 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
COL17A1Q9UMD9 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
COL17A1Q9UMD9 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC30.57■■■□□ 2.49
COL17A1Q9UMD9 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
COL17A1Q9UMD9 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC30.57■■■□□ 2.48
COL17A1Q9UMD9 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC30.57■■■□□ 2.48
COL17A1Q9UMD9 C1QL1P1-201ENST00000568105 661 ntBASIC30.57■■■□□ 2.48
COL17A1Q9UMD9 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC30.57■■■□□ 2.48
COL17A1Q9UMD9 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC30.57■■■□□ 2.48
COL17A1Q9UMD9 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC30.57■■■□□ 2.48
COL17A1Q9UMD9 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC30.57■■■□□ 2.48
COL17A1Q9UMD9 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
COL17A1Q9UMD9 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
COL17A1Q9UMD9 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC30.57■■■□□ 2.48
COL17A1Q9UMD9 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC30.57■■■□□ 2.48
COL17A1Q9UMD9 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
COL17A1Q9UMD9 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC30.57■■■□□ 2.48
COL17A1Q9UMD9 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC30.57■■■□□ 2.48
COL17A1Q9UMD9 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC30.57■■■□□ 2.48
COL17A1Q9UMD9 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
COL17A1Q9UMD9 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
COL17A1Q9UMD9 GPX4-207ENST00000589115 812 ntTSL 2 BASIC30.57■■■□□ 2.48
COL17A1Q9UMD9 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
COL17A1Q9UMD9 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC30.56■■■□□ 2.48
COL17A1Q9UMD9 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC30.56■■■□□ 2.48
COL17A1Q9UMD9 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC30.56■■■□□ 2.48
COL17A1Q9UMD9 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
COL17A1Q9UMD9 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
COL17A1Q9UMD9 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
COL17A1Q9UMD9 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
COL17A1Q9UMD9 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC30.56■■■□□ 2.48
COL17A1Q9UMD9 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC30.56■■■□□ 2.48
COL17A1Q9UMD9 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC30.56■■■□□ 2.48
COL17A1Q9UMD9 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC30.56■■■□□ 2.48
COL17A1Q9UMD9 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC30.56■■■□□ 2.48
COL17A1Q9UMD9 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
COL17A1Q9UMD9 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC30.56■■■□□ 2.48
COL17A1Q9UMD9 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC30.55■■■□□ 2.48
COL17A1Q9UMD9 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC30.55■■■□□ 2.48
COL17A1Q9UMD9 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
COL17A1Q9UMD9 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC30.55■■■□□ 2.48
COL17A1Q9UMD9 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
COL17A1Q9UMD9 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
COL17A1Q9UMD9 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
COL17A1Q9UMD9 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
COL17A1Q9UMD9 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC30.55■■■□□ 2.48
COL17A1Q9UMD9 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC30.55■■■□□ 2.48
COL17A1Q9UMD9 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC30.55■■■□□ 2.48
COL17A1Q9UMD9 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC30.55■■■□□ 2.48
COL17A1Q9UMD9 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
COL17A1Q9UMD9 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
COL17A1Q9UMD9 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
COL17A1Q9UMD9 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
COL17A1Q9UMD9 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
COL17A1Q9UMD9 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC30.54■■■□□ 2.48
COL17A1Q9UMD9 AL359075.1-203ENST00000462729 1002 ntBASIC30.54■■■□□ 2.48
COL17A1Q9UMD9 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC30.54■■■□□ 2.48
COL17A1Q9UMD9 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
COL17A1Q9UMD9 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC30.53■■■□□ 2.48
COL17A1Q9UMD9 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
COL17A1Q9UMD9 AC141257.4-201ENST00000634557 245 ntBASIC30.53■■■□□ 2.48
COL17A1Q9UMD9 AC136944.6-201ENST00000634818 245 ntBASIC30.53■■■□□ 2.48
COL17A1Q9UMD9 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
COL17A1Q9UMD9 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
COL17A1Q9UMD9 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
COL17A1Q9UMD9 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
COL17A1Q9UMD9 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
COL17A1Q9UMD9 KRT18P38-201ENST00000449496 1282 ntBASIC30.52■■■□□ 2.48
COL17A1Q9UMD9 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
COL17A1Q9UMD9 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC30.52■■■□□ 2.48
COL17A1Q9UMD9 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC30.52■■■□□ 2.48
COL17A1Q9UMD9 RN7SL510P-201ENST00000581311 263 ntBASIC30.52■■■□□ 2.48
COL17A1Q9UMD9 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC30.52■■■□□ 2.48
COL17A1Q9UMD9 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
COL17A1Q9UMD9 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC30.52■■■□□ 2.48
COL17A1Q9UMD9 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
COL17A1Q9UMD9 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
COL17A1Q9UMD9 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
COL17A1Q9UMD9 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
COL17A1Q9UMD9 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC30.51■■■□□ 2.48
COL17A1Q9UMD9 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
COL17A1Q9UMD9 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC30.51■■■□□ 2.48
COL17A1Q9UMD9 AC004980.1-204ENST00000429707 299 ntBASIC30.51■■■□□ 2.48
COL17A1Q9UMD9 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC30.51■■■□□ 2.48
COL17A1Q9UMD9 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.48
COL17A1Q9UMD9 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
COL17A1Q9UMD9 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
COL17A1Q9UMD9 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
COL17A1Q9UMD9 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
COL17A1Q9UMD9 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC30.51■■■□□ 2.47
COL17A1Q9UMD9 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC30.51■■■□□ 2.47
COL17A1Q9UMD9 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
COL17A1Q9UMD9 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC30.5■■■□□ 2.47
COL17A1Q9UMD9 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC30.5■■■□□ 2.47
COL17A1Q9UMD9 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC30.5■■■□□ 2.47
COL17A1Q9UMD9 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC30.5■■■□□ 2.47
COL17A1Q9UMD9 CR769767.2-201ENST00000622735 460 ntBASIC30.5■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms