Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRFN1Q9P244 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
LRFN1Q9P244 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRFN1Q9P244 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.4■□□□□ 0.54
LRFN1Q9P244 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRFN1Q9P244 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.4■□□□□ 0.54
LRFN1Q9P244 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.4■□□□□ 0.54
LRFN1Q9P244 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRFN1Q9P244 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.4■□□□□ 0.54
LRFN1Q9P244 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.4■□□□□ 0.54
LRFN1Q9P244 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
LRFN1Q9P244 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRFN1Q9P244 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRFN1Q9P244 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.4■□□□□ 0.54
LRFN1Q9P244 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.4■□□□□ 0.54
LRFN1Q9P244 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
LRFN1Q9P244 AC110285.5-201ENST00000611501 352 ntBASIC18.4■□□□□ 0.54
LRFN1Q9P244 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.4■□□□□ 0.54
LRFN1Q9P244 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRFN1Q9P244 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRFN1Q9P244 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRFN1Q9P244 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.4■□□□□ 0.54
LRFN1Q9P244 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRFN1Q9P244 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRFN1Q9P244 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.39■□□□□ 0.54
LRFN1Q9P244 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LRFN1Q9P244 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LRFN1Q9P244 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
LRFN1Q9P244 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRFN1Q9P244 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRFN1Q9P244 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
LRFN1Q9P244 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.39■□□□□ 0.53
LRFN1Q9P244 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.39■□□□□ 0.53
LRFN1Q9P244 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
LRFN1Q9P244 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LRFN1Q9P244 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
LRFN1Q9P244 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRFN1Q9P244 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.39■□□□□ 0.53
LRFN1Q9P244 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.39■□□□□ 0.53
LRFN1Q9P244 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LRFN1Q9P244 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
LRFN1Q9P244 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.38■□□□□ 0.53
LRFN1Q9P244 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRFN1Q9P244 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRFN1Q9P244 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.38■□□□□ 0.53
LRFN1Q9P244 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.38■□□□□ 0.53
LRFN1Q9P244 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
LRFN1Q9P244 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.38■□□□□ 0.53
LRFN1Q9P244 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRFN1Q9P244 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.38■□□□□ 0.53
LRFN1Q9P244 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.38■□□□□ 0.53
LRFN1Q9P244 Z99916.2-201ENST00000604037 246 ntBASIC18.38■□□□□ 0.53
LRFN1Q9P244 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRFN1Q9P244 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
LRFN1Q9P244 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
LRFN1Q9P244 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRFN1Q9P244 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRFN1Q9P244 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRFN1Q9P244 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.38■□□□□ 0.53
LRFN1Q9P244 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRFN1Q9P244 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
LRFN1Q9P244 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRFN1Q9P244 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
LRFN1Q9P244 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
LRFN1Q9P244 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRFN1Q9P244 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRFN1Q9P244 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRFN1Q9P244 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
LRFN1Q9P244 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRFN1Q9P244 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
LRFN1Q9P244 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.37■□□□□ 0.53
LRFN1Q9P244 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.37■□□□□ 0.53
LRFN1Q9P244 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.37■□□□□ 0.53
LRFN1Q9P244 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.37■□□□□ 0.53
LRFN1Q9P244 AL121829.2-201ENST00000620908 328 ntBASIC18.37■□□□□ 0.53
LRFN1Q9P244 KRT8P20-201ENST00000423953 1409 ntBASIC18.37■□□□□ 0.53
LRFN1Q9P244 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRFN1Q9P244 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRFN1Q9P244 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.37■□□□□ 0.53
LRFN1Q9P244 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRFN1Q9P244 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRFN1Q9P244 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRFN1Q9P244 AC124283.5-201ENST00000624661 1809 ntBASIC18.37■□□□□ 0.53
LRFN1Q9P244 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LRFN1Q9P244 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRFN1Q9P244 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
LRFN1Q9P244 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRFN1Q9P244 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRFN1Q9P244 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
LRFN1Q9P244 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRFN1Q9P244 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRFN1Q9P244 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRFN1Q9P244 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRFN1Q9P244 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRFN1Q9P244 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
LRFN1Q9P244 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRFN1Q9P244 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.36■□□□□ 0.53
LRFN1Q9P244 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRFN1Q9P244 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRFN1Q9P244 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms